8,307 research outputs found
Distributed Holistic Clustering on Linked Data
Link discovery is an active field of research to support data integration in
the Web of Data. Due to the huge size and number of available data sources,
efficient and effective link discovery is a very challenging task. Common
pairwise link discovery approaches do not scale to many sources with very large
entity sets. We here propose a distributed holistic approach to link many data
sources based on a clustering of entities that represent the same real-world
object. Our clustering approach provides a compact and fused representation of
entities, and can identify errors in existing links as well as many new links.
We support a distributed execution of the clustering approach to achieve faster
execution times and scalability for large real-world data sets. We provide a
novel gold standard for multi-source clustering, and evaluate our methods with
respect to effectiveness and efficiency for large data sets from the geographic
and music domains
From Frequency to Meaning: Vector Space Models of Semantics
Computers understand very little of the meaning of human language. This
profoundly limits our ability to give instructions to computers, the ability of
computers to explain their actions to us, and the ability of computers to
analyse and process text. Vector space models (VSMs) of semantics are beginning
to address these limits. This paper surveys the use of VSMs for semantic
processing of text. We organize the literature on VSMs according to the
structure of the matrix in a VSM. There are currently three broad classes of
VSMs, based on term-document, word-context, and pair-pattern matrices, yielding
three classes of applications. We survey a broad range of applications in these
three categories and we take a detailed look at a specific open source project
in each category. Our goal in this survey is to show the breadth of
applications of VSMs for semantics, to provide a new perspective on VSMs for
those who are already familiar with the area, and to provide pointers into the
literature for those who are less familiar with the field
Inductive queries for a drug designing robot scientist
It is increasingly clear that machine learning algorithms need to be integrated in an iterative scientific discovery loop, in which data is queried repeatedly by means of inductive queries and where the computer provides guidance to the experiments that are being performed. In this chapter, we summarise several key challenges in achieving this integration of machine learning and data mining algorithms in methods for the discovery of Quantitative Structure Activity Relationships (QSARs). We introduce the concept of a robot scientist, in which all steps of the discovery process are automated; we discuss the representation of molecular data such that knowledge discovery tools can analyse it, and we discuss the adaptation of machine learning and data mining algorithms to guide QSAR experiments
Substructure Discovery Using Minimum Description Length and Background Knowledge
The ability to identify interesting and repetitive substructures is an
essential component to discovering knowledge in structural data. We describe a
new version of our SUBDUE substructure discovery system based on the minimum
description length principle. The SUBDUE system discovers substructures that
compress the original data and represent structural concepts in the data. By
replacing previously-discovered substructures in the data, multiple passes of
SUBDUE produce a hierarchical description of the structural regularities in the
data. SUBDUE uses a computationally-bounded inexact graph match that identifies
similar, but not identical, instances of a substructure and finds an
approximate measure of closeness of two substructures when under computational
constraints. In addition to the minimum description length principle, other
background knowledge can be used by SUBDUE to guide the search towards more
appropriate substructures. Experiments in a variety of domains demonstrate
SUBDUE's ability to find substructures capable of compressing the original data
and to discover structural concepts important to the domain. Description of
Online Appendix: This is a compressed tar file containing the SUBDUE discovery
system, written in C. The program accepts as input databases represented in
graph form, and will output discovered substructures with their corresponding
value.Comment: See http://www.jair.org/ for an online appendix and other files
accompanying this articl
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