The Fast Heuristic Algorithms and Post-Processing Techniques to Design Large and Low-Cost Communication Networks

It is challenging to design large and low-cost communication networks. In this paper, we formulate this challenge as the prize-collecting Steiner Tree Problem (PCSTP). The objective is to minimize the costs of transmission routes and the disconnected monetary or informational profits. Initially, we note that the PCSTP is MAX SNP-hard. Then, we propose some post-processing techniques to improve suboptimal solutions to PCSTP. Based on these techniques, we propose two fast heuristic algorithms: the first one is a quasilinear time heuristic algorithm that is faster and consumes less memory than other algorithms; and the second one is an improvement of a stateof-the-art polynomial time heuristic algorithm that can find high-quality solutions at a speed that is only inferior to the first one. We demonstrate the competitiveness of our heuristic algorithms by comparing them with the state-of-the-art ones on the largest existing benchmark instances (169 800 vertices and 338 551 edges). Moreover, we generate new instances that are even larger (1 000 000 vertices and 10 000 000 edges) to further demonstrate their advantages in large networks. The state-ofthe-art algorithms are too slow to find high-quality solutions for instances of this size, whereas our new heuristic algorithms can do this in around 6 to 45s on a personal computer. Ultimately, we apply our post-processing techniques to update the bestknown solution for a notoriously difficult benchmark instance to show that they can improve near-optimal solutions to PCSTP. In conclusion, we demonstrate the usefulness of our heuristic algorithms and post-processing techniques for designing large and low-cost communication networks

On the performance of a cavity method based algorithm for the Prize-Collecting Steiner Tree Problem on graphs

We study the behavior of an algorithm derived from the cavity method for the Prize-Collecting Steiner Tree (PCST) problem on graphs. The algorithm is based on the zero temperature limit of the cavity equations and as such is formally simple (a fixed point equation resolved by iteration) and distributed (parallelizable). We provide a detailed comparison with state-of-the-art algorithms on a wide range of existing benchmarks networks and random graphs. Specifically, we consider an enhanced derivative of the Goemans-Williamson heuristics and the DHEA solver, a Branch and Cut Linear/Integer Programming based approach. The comparison shows that the cavity algorithm outperforms the two algorithms in most large instances both in running time and quality of the solution. Finally we prove a few optimality properties of the solutions provided by our algorithm, including optimality under the two post-processing procedures defined in the Goemans-Williamson derivative and global optimality in some limit cases

Vertex and edge covers with clustering properties: complexity and algorithms

We consider the concepts of a t-total vertex cover and a t-total edge cover (t≥1), which generalise the notions of a vertex cover and an edge cover, respectively. A t-total vertex (respectively edge) cover of a connected graph G is a vertex (edge) cover S of G such that each connected component of the subgraph of G induced by S has at least t vertices (edges). These definitions are motivated by combining the concepts of clustering and covering in graphs. Moreover they yield a spectrum of parameters that essentially range from a vertex cover to a connected vertex cover (in the vertex case) and from an edge cover to a spanning tree (in the edge case). For various values of t, we present NP-completeness and approximability results (both upper and lower bounds) and FTP algorithms for problems concerned with finding the minimum size of a t-total vertex cover, t-total edge cover and connected vertex cover, in particular improving on a previous FTP algorithm for the latter problem

A Solution Merging Heuristic for the Steiner Problem in Graphs Using Tree Decompositions

Fixed parameter tractable algorithms for bounded treewidth are known to exist for a wide class of graph optimization problems. While most research in this area has been focused on exact algorithms, it is hard to find decompositions of treewidth sufficiently small to make these al- gorithms fast enough for practical use. Consequently, tree decomposition based algorithms have limited applicability to large scale optimization. However, by first reducing the input graph so that a small width tree decomposition can be found, we can harness the power of tree decomposi- tion based techniques in a heuristic algorithm, usable on graphs of much larger treewidth than would be tractable to solve exactly. We propose a solution merging heuristic to the Steiner Tree Problem that applies this idea. Standard local search heuristics provide a natural way to generate subgraphs with lower treewidth than the original instance, and subse- quently we extract an improved solution by solving the instance induced by this subgraph. As such the fixed parameter tractable algorithm be- comes an efficient tool for our solution merging heuristic. For a large class of sparse benchmark instances the algorithm is able to find small width tree decompositions on the union of generated solutions. Subsequently it can often improve on the generated solutions fast

A Fixed Parameter Tractable Approximation Scheme for the Optimal Cut Graph of a Surface

Given a graph $G$ cellularly embedded on a surface $\Sigma$ of genus $g$, a cut graph is a subgraph of $G$ such that cutting $\Sigma$ along $G$ yields a topological disk. We provide a fixed parameter tractable approximation scheme for the problem of computing the shortest cut graph, that is, for any $\varepsilon >0$, we show how to compute a $(1+ \varepsilon)$ approximation of the shortest cut graph in time $f(\varepsilon, g)n^3$. Our techniques first rely on the computation of a spanner for the problem using the technique of brick decompositions, to reduce the problem to the case of bounded tree-width. Then, to solve the bounded tree-width case, we introduce a variant of the surface-cut decomposition of Ru\'e, Sau and Thilikos, which may be of independent interest

Distinguishing Infections on Different Graph Topologies

The history of infections and epidemics holds famous examples where understanding, containing and ultimately treating an outbreak began with understanding its mode of spread. Influenza, HIV and most computer viruses, spread person to person, device to device, through contact networks; Cholera, Cancer, and seasonal allergies, on the other hand, do not. In this paper we study two fundamental questions of detection: first, given a snapshot view of a (perhaps vanishingly small) fraction of those infected, under what conditions is an epidemic spreading via contact (e.g., Influenza), distinguishable from a "random illness" operating independently of any contact network (e.g., seasonal allergies); second, if we do have an epidemic, under what conditions is it possible to determine which network of interactions is the main cause of the spread -- the causative network -- without any knowledge of the epidemic, other than the identity of a minuscule subsample of infected nodes? The core, therefore, of this paper, is to obtain an understanding of the diagnostic power of network information. We derive sufficient conditions networks must satisfy for these problems to be identifiable, and produce efficient, highly scalable algorithms that solve these problems. We show that the identifiability condition we give is fairly mild, and in particular, is satisfied by two common graph topologies: the grid, and the Erdos-Renyi graphs