E-infrastructures fostering multi-centre collaborative research into the intensive care management of patients with brain injury

Clinical research is becoming ever more collaborative with multi-centre trials now a common practice. With this in mind, never has it been more important to have secure access to data and, in so doing, tackle the challenges of inter-organisational data access and usage. This is especially the case for research conducted within the brain injury domain due to the complicated multi-trauma nature of the disease with its associated complex collation of time-series data of varying resolution and quality. It is now widely accepted that advances in treatment within this group of patients will only be delivered if the technical infrastructures underpinning the collection and validation of multi-centre research data for clinical trials is improved. In recognition of this need, IT-based multi-centre e-Infrastructures such as the Brain Monitoring with Information Technology group (BrainIT - www.brainit.org) and Cooperative Study on Brain Injury Depolarisations (COSBID - www.cosbid.de) have been formed. A serious impediment to the effective implementation of these networks is access to the know-how and experience needed to install, deploy and manage security-oriented middleware systems that provide secure access to distributed hospital based datasets and especially the linkage of these data sets across sites. The recently funded EU framework VII ICT project Advanced Arterial Hypotension Adverse Event prediction through a Novel Bayesian Neural Network (AVERT-IT) is focused upon tackling these challenges. This chapter describes the problems inherent to data collection within the brain injury medical domain, the current IT-based solutions designed to address these problems and how they perform in practice. We outline how the authors have collaborated towards developing Grid solutions to address the major technical issues. Towards this end we describe a prototype solution which ultimately formed the basis for the AVERT-IT project. We describe the design of the underlying Grid infrastructure for AVERT-IT and how it will be used to produce novel approaches to data collection, data validation and clinical trial design is also presented

Designing privacy for scalable electronic healthcare linkage

A unified electronic health record (EHR) has potentially immeasurable benefits to society, and the current healthcare industry drive to create a single EHR reflects this. However, adoption is slow due to two major factors: the disparate nature of data and storage facilities of current healthcare systems and the security ramifications of accessing and using that data and concerns about potential misuse of that data. To attempt to address these issues this paper presents the VANGUARD (Virtual ANonymisation Grid for Unified Access of Remote Data) system which supports adaptive security-oriented linkage of disparate clinical data-sets to support a variety of virtual EHRs avoiding the need for a single schematic standard and natural concerns of data owners and other stakeholders on data access and usage. VANGUARD has been designed explicit with security in mind and supports clear delineation of roles for data linkage and usage

Temporal pattern recognition in multiparameter ICU data

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2007.Includes bibliographical references (leaves 210-219).Intensive Care Unit (ICU) patients are physiologically fragile and require vigilant monitoring and support. The myriad of data gathered from biosensors and clinical information systems has created a challenge for clinicians to assimilate and interpret such large volumes of data. Physiologic measurements in the ICU are inherently noisy, multidimensional, and can readily fluctuate in response to therapeutic interventions as well as evolving pathophysiologic states. ICU patient monitoring systems may potentially improve the efficiency, accuracy and timeliness of clinical decision-making in intensive care. However, the aforementioned characteristics of ICU data can pose a significant signal processing and pattern recognition challenge---often leading to false and clinically irrelevant alarms. We have developed a temporal database of several thousand ICU patient records to facilitate research in advanced monitoring systems. The MIMIC-II database includes high-resolution physiologic waveforms such as ECG, blood pressures waveforms, vital sign trends, laboratory data, fluid balance, therapy profiles, and clinical progress notes over each patient's ICU stay. We quantitatively and qualitatively characterize the MIMIC-II database and include examples of clinical studies that can be supported by its unique attributes. We also introduce a novel algorithm for identifying "similar" temporal patterns that may illuminate hidden information in physiologic time series. The discovery of multi-parameter temporal patterns that are predictive of physiologic instability may aid clinicians in optimizing care. In this thesis, we introduce a novel temporal similarity metric based on a transformation of time series data into an intuitive symbolic representation.(cont.) The symbolic transform is based on a wavelet decomposition to characterize time series dynamics at multiple time scales. The symbolic transformation allows us to utilize classical information retrieval algorithms based on a vector-space model. Our algorithm is capable of assessing the similarity between multi-dimensional time series and is computationally efficient. We utilized our algorithm to identify similar physiologic patterns in hemodynamic time series from ICU patients. The results of this thesis demonstrate that statistical similarities between different patient time series may have meaningful physiologic interpretations in the detection of impending hemodynamic deterioration. Thus, our framework may be of potential use in clinical decision-support systems. As a generalized time series similarity metric, the algorithms that are described have applications in several other domains as well.by Mohammed Saeed.Ph.D

Secondary Analysis of Electronic Health Records

Health Informatics; Ethics; Data Mining and Knowledge Discovery; Statistics for Life Sciences, Medicine, Health Science

Advanced Sensing and Image Processing Techniques for Healthcare Applications

This Special Issue aims to attract the latest research and findings in the design, development and experimentation of healthcare-related technologies. This includes, but is not limited to, using novel sensing, imaging, data processing, machine learning, and artificially intelligent devices and algorithms to assist/monitor the elderly, patients, and the disabled population

Improving the acute and perioperative hemodynamic assessment

First, this thesis aimed to extend the evidence on the applicability of hemodynamic monitoring during the perioperative period and after admission to the ICU. Second, we aimed to gain knowledge on how to improve the conduct of studies in perioperative and critical care medicine.We provided an overview of the current evidence for hemodynamic monitoring in perioperative goal-directed therapy. We showed that the studies on this subject showed clinical heterogeneity and risk of bias. Extension of all aspects of hemodynamic monitoring was considered in this thesis. A study was performed on the educated guess of physicians when estimating cardiac output using clinical examination to help improve the reliability of the clinical examination. We showed that physicians at the bed-side mainly consider mottling score and norepinephrine dose when estimating cardiac output. In another study, we demonstrated that blood pressure measurements differ when measured invasively or non-invasively and that these differences may have clinical consequences. We also showed that echocardiography could be performed by novices, but experts are needed to interpret obtained images. We demonstrated that cardiac output measurements vary in critically ill patients when measured with echocardiography or uncalibrated pulse wave analysis.For the second part of this thesis, we demonstrated that various mortality prediction models exist for critically ill patients. Quality of methodology often lacks for these models, and improvements have to be made to help patient care. To help improve the quality of studies, we finally propose that study protocols are prepublished and made available for peer-review before conduct

A clinical grid infrastructure supporting adverse hypotensive event prediction

The condition of hypotension - where a person's arterial blood pressure drops to an abnormally low level - is a common and potentially fatal occurrence in patients under intensive care. As medical interventions to treat such events are typically reactive and often aggressive, there would be great benefit in having a prediction system that can warn health-care professionals of an impending event and thereby allow them to provide non-invasive, preventative treatments. This paper describes the progress of the EU FP7 funded Avert-IT project, which is developing just such a system using Bayesian neural network learning technology based upon an integrated, real-time data grid infrastructure, which draws together heterogeneous data-sets from six clinical centres across Europe