Quantifying differences in parasite numbers between samples of hosts

Abstract An important question in many parasitological studies is the assessment of differences in parasite numbers between samples of hosts. This is not always easy: while almost everybody will agree that the main task consists in deciding whether the values in one sample tend to be higher than the values of the other sample, there is considerable disagreement about what higher (or lower) should mean. In common use as dissimilarity measures are differences between mean values, medians, geometric means, prevalence rates, relative effects, and more. In general, different measures can lead to different conclusions. However, a debate as to which measure is superior is fruitless; it depends on goals and circumstances of the respective study. In our opinion, it is more important to identify situations in which most of the above mentioned measures coincide, and hence, one can confidently claim that the values in one sample are higher than in the other. This is the case when one sample is stochastically larger than the second. It is the aim of this paper to review this concept using distributional and data examples, and of proposing graphical tools for detecting stochastic dominance

Genetic diversity of the red-spotted tokay gecko (Gekko gecko Linnaeus, 1758) (Squamata: Gekkonidae) in Southeast Asia determined with multilocus enzyme electrophoresis

Red-spotted tokay geckos, Gekko gecko, are distributed mainly in Southeast Asia. They are a traditional Chinese medicine, with the massive hunting for exports dramatically decreasing their numbers. Information on the genetic diversity of these geckos in Southeast Asia is very limited. This study aims to explore intrapopulation and interpopulation genetic variation and the genetic structure of 16 populations collected from different localities in Thailand, Lao People’s Democratic Republic, and Cambodia using multilocus enzyme electrophoresis. Relatively high genetic diversity occurred at both the intrapopulation and interpopulation levels. Genetic differentiation with F$_{ST}$ values ranging between 0.006 - 0.892 was found. Five distinct genetic groups of the red-spotted tokay populations could be classified. A group of populations from northern Thailand showed the highest genetic differentiation from the other groups. Moreover, there was a substantial genetic subdivision depending on the genetic groups with F$_{CT}$ = 0.664 and F$_{SC}$ = 0.185. This genetic structure is related to geographical distribution and distance between populations, R$^{2}$ = 0.5614, p < 0.001. Our findings of pronounced genetic structuring and the concomitant conservation genetic consequences if further population loss occurs mean that management actions should therefore focus on the conservation of all of the main sites where tokay geckos still occur

The Argasidae, Ixodidae and Nuttalliellidae (Acari: Ixodida) of the world : a list of valid species names

This work is intended as a consensus list of valid tick names, following recent revisionary studies, wherein we recognize 896 species of ticks in 3 families. The Nuttalliellidae is monotypic, containing the single entity Nuttalliella namaqua. The Argasidae consists of 193 species, but there is widespread disagreement concerning the genera in this family, and fully 133 argasids will have to be further studied before any consensus can be reached on the issue of genus-level classification. The Ixodidae comprises 702 species in 14 genera: Amblyomma (130 species, of which 17 were formerly included in Aponomma, a genus that is still considered valid by some authors), Anomalohimalaya (3), Bothriocroton (7, all previously included in Aponomma), Cosmiomma (1), Cornupalpatum (1), Compluriscutula (1), Dermacentor (34, including the single member of the former genus Anocentor, which is still considered valid by some authors), Haemaphysalis (166), Hyalomma (27), Ixodes (243), Margaropus (3), Nosomma (2), Rhipicentor (2) and Rhipicephalus (82, including 5 species from the former genus Boophilus, which is still considered valid by some authors). We regard six names as invalid: Amblyomma laticaudae Warburton, 1933 is a synonym of Amblyomma nitidum Hirst & Hirst, 1910; Bothriocroton decorosum (Koch, 1867) is a synonym of B. undatum (Fabricius, 1775); Haemaphysalis vietnamensis Hoogstraal & Wilson, 1966 is a synonym of H. colasbelcouri (Santos Dias, 1958); Haemaphysalis xinjiangensis Teng, 1980 is a synonym of H. danieli Černý & Hoogstraal, 1977; Hyalomma erythraeum Tonelli-Rondelli, 1932 is a synonym of H. impeltatum Schulze and Schlottke, 1930 and Rhipicephalus hoogstraali Kolonin, 2009 was not described according to the rules of the International Code of Zoological Nomenclature.Article consists of 12 pages. Bibliography included on last page. Article was migrated from publisher pdf version to MSWord using Abbyy PDF Transformer Version 2.0. Publisher formatting was removed with MSWord 2003 (MSoffice Professional 2003), and document was converted back to pdf using Adobe Distiller Version 6.Includes bibliographical referenceshttp://www.mapress.com/zootaxa/index.htmlab2013 (Author correction

Preliminary genetic evidence of two different populations of Opisthorchis viverrini in Lao PDR

Opisthorchis viverrini is a major public health concern in Southeast Asia. Various reports have suggested that this parasite may represent a species complex, with genetic structure in the region perhaps being dictated by geographical factors and different species of intermediate hosts. We used four microsatellite loci to analyze O. viverrini adult worms originating from six species of cyprinid fish in Thailand and Lao PDR. Two distinct O. viverrini populations were observed. In Ban Phai, Thailand, only one subgroup occurred, hosted by two different fish species. Both subgroups occurred in fish from That Luang, Lao PDR, but were represented to very different degrees among the fish hosts there. Our data suggest that, although geographical separation is more important than fish host specificity in influencing genetic structure, it is possible that two species of Opisthorchis, with little interbreeding, are present near Vientiane in Lao PDR

Cohort profile: cholangiocarcinoma screening and care program (CASCAP)

Background: Cholangiocarcinoma (CCA) is an extremely aggressive cancer that is usually fatal. Although globally morbidity and mortality are increasing, knowledge of the disease remains limited. The Mekong region of Southeast Asia, and particularly the northeast of Thailand, has by far the highest incidence of CCA worldwide with 135.4 per 100,000 among males and 43.0 per 100,000 among females being reported in Khon Kaen Province. Most patients are first seen during late stage disease with 5-year survival being less than 10 %. Starting in 1984, control and prevention strategies have been focused on health education. Although early detection can substantially increase 5-year survival, there are currently no strategies to increase early diagnosis. Methods/design: The Cholangiocarcinoma Screening and Care Program (CASCAP) is a prospective cohort study comprising two cohorts- the screening and the patient cohorts. For the screening cohort, ultrasound examination will be carried out regularly at least annually to determine whether there is current bile duct and/or liver pathology so that the optimal screening program for early diagnosis can be established. This cohort is expected to include at least 150,000 individuals coming from high-risk areas for CCA. For the patient cohort, it is estimated that about 25,000 CCA patients will be included during the 5-year recruitment period. All CCA patients will be treated according to routine clinical care and followed so that effective surgical treatment can be formulated. This cohort is indeed a conventional cancer registry. Thus, CASCAP is an ongoing project in which the number of participants changes dynamically. Discussions: This is the first project on CCA that involves screening the at risk population at the community level. At the time of preparing this report, a total of 85,927 individuals have been enrolled in the screening cohort, 55.0 % of whom have already undergone ultrasound screening, and 2661 CCA cases have been enrolled in the patient cohort. Among the participants of the screening, whose mean age was 53.8 ± 9.8 years, 55.6 % were female, 77.5 % attained primary school as the highest level of education, 79.9 % were farmers, 29.9 %, reported having relatives with CCA, 89.1 % had eaten uncooked fish, and 42.2 % of those who had been tested for liver fluke were found to be infected

Climate changes and suitability for the ticks Amblyomma hebraeum and Amblyomma variegatum (Ixodidae) in Zimbabwe (1974–1999)

The spread of Amblyomma hebraeum has been reported in Zimbabwe. At the same time there was little or no spread in the distribution of Amblyomma variegatum. This paper examines the climatic cycles and their trends in the period 1974–1999 with a view to explaining the abiotic causes of this spread, and of forecasting the likely tendency in climate suitability for both tick species. An annual data-set of rainfall and air temperature was used as a source for climate, together with a habitat-modeling algorithm to estimate climate suitability for both ticks. Long-term suitable habitat for A. hebraeum exists mainly in the south and southeast of the country. Areas of adequate habitat for A. variegatum exist across the country, between approximately 17°S and 18.5°S, and are most suitable in regions of the northwest. The climate niches of the two species differ, and account for their almost allopatric distributions, as observed in the duration and intensity of the dry period and in total annual rainfall. Cyclic changes in both temperature and rainfall drive the periodic modifications in the distributions of the ticks. More intense periods of drought in the highveld, drive the expansion of A. hebraeum in this region. Temperature does not have any effect on the tendency in this area. Areas in south and southeast show a trend towards an increase in climatic suitability because of an increase in temperature. Zones in which habitat suitability is increasing for A. variegatum are restricted to the northwestern parts of the country, because warmer temperatures and a slight decrease in the intensity of the dry season. The progressive increase in temperatures seems to be forcing the dispersion of A. variegatum towards areas outside of zones that have a prolonged dry period. On the other hand A. hebraeum is compelled to spread northwards, following areas with adequate rainfall patterns, but halted by temperature limits and perhaps competition with A. variegatum. Without adequate control measures, invasive waves of A. hebraeum may occur over a background swell of northward expansion.International Cooperation Programme of the European Union through Coordination Action Project no. 51056

A simplified method of cleaning ixodid ticks for microscopy

Journal compilation © 2009 Royal Microscopical SocietyThe cleaning of ixodid ticks for microscopy can be achieved quickly and efficiently using a combination of a wax solvent and an ultrasonic cleaner. The technique involves minimum handling of specimens, produces no detectable damage and is suitable for cleaning many specimens at the same time

Use of statistics as another factor leading to an overestimation of chlorhexidine's role in skin antisepsis

10.1086/671282Infection Control and Hospital Epidemiology348872-873ICEP