Pattern characterization of genes involved in non-specific immune response in Staphylococcus aureus isolates from intramammary infections

Staphylococcus aureus isolated from mammary gland are characterized by different genetic patterns. Ninety four isolates from 33 dairy herds were analyzed by the means of amicroarray to investigate S. aureus virulence patterns and the distribution of genes believed to be involved in immune evasion. None of the 94 isolates considered were MRSA. However, 50% of the isolates belonged to complexes related to MRSA and to human diseases, while only about 25% of them can be considered as exclusively of bovine origin. The distribution of clonal complexes and the different gene patterns observed confirmed the presence of an influence of geographical localization. The assessment of the influence of genes related to immune evasion on quarter milk cell count showed as four of them showed to be significantly associated to an increase quarter milk SCC. These genes could be potential target for developing new vaccines against S.aureus

Sequence analysis of a microsatellite and its flanking regions in intraspecific hybrids of grapevine (Vitis vinifera L.)

Microsatellite (MS) VVMD21 (BOWERS et al. 1999) was taken as a model to explore the molecular basis of polymorphism in a panel of 6 grapevine accessions (Vitis vinifera L.), consisting of Sangiovese and Cabernet Sauvignon and 4 F1 plants derived from crossing both varieties. The 12 alleles of both parents and the progeny were cloned and sequenced. The microsatellite repeat (AG)n>6 was found in each sequence, together with a poly-T rich region that showed irregularity. Furthermore, single nucleotide deletion or exchange (point mutations) were found in the microsatellite flanking regions

Islands as Time Capsules for Genetic Diversity Conservation: The Case of the Giglio Island Mouflon

The use of multidisciplinary approaches of investigation including biological, biogeographical, historical, morphological, and genetic analysis, can be useful in identifying and preserving biodiversity. The present study focuses on the characterisation and conservation of a mouflon population (Ovis gmelini musimon) from the Mediterranean island of Giglio. Here we provide the first molecular data on the Giglio population and compare it with mouflons from Sardinia, Elba, and Corsica using both nuclear and mitochondrial markers. Our results suggest that the Giglio mouflon harbours genetic variability likely of Sardinian origin but not represented in the current Sardinian mouflon diversity. Although not presenting the typical characteristics of an invasive alien species, the Giglio mouflon is being subjected to eradication through culling or trapping and surgical sterilization. The molecular evidence we report highlights that such actions are causing the irremediable loss of ancestral genetic variants of the genus Ovis. Finally, we highlight how a multidisciplinary approach is necessary to aid the conservation and management of the anthropochorous populations of Mediterranean mammals

Numerical investigation of the mixing of highly viscous liquids with Cowles impellers

This work is aimed at investigating the mixing process of highly viscous paints, used to colour leathers in the tanning industry, through Computational Fluid Dynamics (CFD). In particular, a mixing tank is fed with a master liquid and different liquid pigments and then stirred by Cowles impellers in order to obtain a paint of a uniform colour. The typical dynamic viscosity of the liquids in this process is μ ~ O(0.1-10) Pa·s, while the Cowles rotational speed is usually very high, i.e. 3000-5000 rpm. The numerical model is based on the solution of the unsteady Reynolds-Averaged Navier–Stokes (RANS) equations for continuity, momentum and species mass fractions, the latter being used to describe the different components. The impeller motion is modelled through the Sliding Deforming Mesh (SDM) approach, using rotating (unstructured) meshes in the impeller region and a static (structured) mesh in the remainder of the tank. The master liquid and coloured pigments are assumed to stratify within the tank at initial time and the steady rotational speed is then imposed abruptly to the impellers. The level of homogeneity in the stirred tank is evaluated through the analysis of component concentration fields over time. In particular, such local concentrations can be used to determine the mixture colour in different regions of the tank, and hence predict the degree of homogeneity at different times; this is accomplished by defining a proper homogeneity indicator based on the spatial variance of the estimated colour. The proposed numerical model provides an efficient method to investigate the colour of the mixture and to evaluate an appropriate mixing time. The methodology gives also important indications for the tank design, especially useful in the case of non-conventional impellers, high rotation rates and viscous fluids

Mirrored images but not silicone models trigger aggressive responses in male common wall lizards

Disentangling the effects of single releasers in animal communication is a demanding task because a releaser often consists of a combination of different key stimuli. Territorial communication in reptiles usually depends on visual, chemical, and acoustic stimuli, but the role of each of them depends on phylogeny. Lacertids are modern lizards that rely mainly on chemical cues for their communication, but they also use aggressive displays based on visual recognition. We experimentally tested the visual stimuli that release an aggressive response in the males of a typical lacertid, the common wall lizard (Podarcis muralis), testing the effects of silicone models and mirrored images in captivity. The response to models and control (a blank sheet) was not significantly different and these stimuli did not release any aggressive behaviour. On the contrary, the reflected image in a mirror caused overt aggression (i.e., bites against it) in 63% of tested individuals. The results clearly demonstrate the role of visual stimuli in territorial communication, but only as a combined effect of shape and motion, differently from other lizard families for which shape is enough to stimulate aggre sive responses. Mirrors can be useful tools to investigate aggression related to physiological and morphological aspects in lacertid lizards

Pathways of 4-hydroxy-2-nonenal detoxification in a human astrocytoma cell line

One of the consequences of the increased level of oxidative stress that often characterizes the cancer cell environment is the abnormal generation of lipid peroxidation products, above all 4-hydroxynonenal. The contribution of this aldehyde to the pathogenesis of several diseases is well known. In this study, we characterized the ADF astrocytoma cell line both in terms of its pattern of enzymatic activities devoted to 4-hydroxynonenal removal and its resistance to oxidative stress induced by exposure to hydrogen peroxide. A comparison with lens cell lines, which, due to the ocular function, are normally exposed to oxidative conditions is reported. Our results show that, overall, ADF cells counteract oxidative stress conditions better than normal cells, thus confirming the redox adaptation demonstrated for several cancer cells. In addition, the markedly high level of NADP+-dependent dehydrogenase activity acting on the glutahionyl-hydroxynonanal adduct detected in ADF cells may promote, at the same time, the detoxification and recovery of cell-reducing power in these cells

Quantum–classical correspondence in spin–boson equilibrium states at arbitrary coupling

The equilibrium properties of nanoscale systems can deviate significantly from standard thermodynamics due to their coupling to an environment. We investigate this here for the θ-angled spin–boson model, where we first derive a compact and general form of the classical equilibrium state including environmental corrections to all orders. Secondly, for the quantum spin–boson model we prove, by carefully taking a large spin limit, that Bohr’s quantum–classical correspondence persists at all coupling strengths. This shows, for the first time, the validity of the quantum–classical correspondence for an open system and gives insight into the regimes where the quantum system is well-approximated by a classical one. Finally, we provide the first classification of the coupling parameter regimes for the spin–boson model, from weak to ultrastrong, both for the quantum case and the classical setting. Our results shed light on the interplay of quantum and mean force corrections in equilibrium states of the spin–boson model, and will help draw the quantum to classical boundary in a range of fields, such as magnetism and exciton dynamics

Exploring potential risk factors of antimicrobial use in beef cattle.

Livestock species are major contributors to the increase of antimicrobial (AM) resistance which is a worldwide concern for both human and animal health. The over-use of AM is widely acknowledged, however, unlike pigs, poultry and dairy cattle, knowledge on potential risk factors affecting AM usage (AMU) in beef industry is limited. Hence, this study aimed to investigate the impact of farm, breed, sex and season of arrival of purchased beef cattle on AMU in Italian beef cattle. Data on 1063 batches were collected from January 2016 to April 2019 from specialised beef fattening farms located in the north of Italy. Information on breed, sex, date of arrival, performance traits and AM agents used on farm was collected, and the treatment incidence 100 (TI100) indexes per batch were calculated using the defined daily dose animal estimated according to Italian summaries of product characteristics. Factors affecting TI100 indexes were investigated using a cross-classified multilevel model. Farms largely differed in terms of AMU. Males had greater AMU than females (P < 0.001), likely due to their higher susceptibility to disease. Statistically significant differences were observed between seasons of arrival with summer and spring having lower TI100 indexes than winter and autumn (P < 0.001). Indeed, winter is commonly linked to an increase in respiratory diseases in beef cattle. Finally, the TI100it indexes tended to be different among breeds with Blonde d'Aquitaine and Limousine having greater AMU compared to the other breeds. Results of this study provided valuable information on potential risk factors of AMU in beef production which may be useful to address its reduction. For instance, the development of tailored management strategies for specific breeds, targeted approaches to improve the health of males as well as greater care towards batches purchased in winter are possible advice to implement on-farm for a more responsible AM stewardship

Detection of genetic diversity among clones of cv. Fortana (Vitis vinifera L.) by microsatellite DNA polymorphism analysis

Allelic polymorphism at 6 microsatellite loci was analyzed in 5 clones of cv. Fortana, which had been divided into two morphological groups (CAB 2, CAB 13, CAB 14, and CAB 1, CAB 3, respectively) by discriminant multivariate analysis of leaf traits. Of the 6 microsatellite loci, 5 (VVS1, VVS2, VVS4, VVMD3, VVMD6) showed polymorphism between clones and one (VVMD7) gave identical DNA profiles. Two genotypic patterns were found: clones CAB 2: CAB 13 and CAB 14 appeared identical and distinct from clones CAB 1 and CAB 3, but all of them shared at least one of the two alleles for each locus, thus showing a certain degree of genetic relatedness. The slight morphological differences of the two Fortana clone groups could thus be related to the diversity of their genotypic profiles. Thus, the two clone groups may have originated not via vegetative propagation of a single individual but from seedlings, parents or siblings of this progenitor. The present investigation supports the assumptions of the polyclonal origin of cv. Fortana and concludes that the strict definition of cultivar, which admits of clonal origin only, is not altogether adequate for the old varieties of unknown origin. The Italian term ''vitigno'' and the French ''cepage'', which do not imply genetic uniformity, would appear more appropriate than cultivar to indicate a winegrape variety