The Extraction of 3D Shape from Texture and Shading in the Human Brain

We used functional magnetic resonance imaging to investigate the human cortical areas involved in processing 3-dimensional (3D) shape from texture (SfT) and shading. The stimuli included monocular images of randomly shaped 3D surfaces and a wide variety of 2-dimensional (2D) controls. The results of both passive and active experiments reveal that the extraction of 3D SfT involves the bilateral caudal inferior temporal gyrus (caudal ITG), lateral occipital sulcus (LOS) and several bilateral sites along the intraparietal sulcus. These areas are largely consistent with those involved in the processing of 3D shape from motion and stereo. The experiments also demonstrate, however, that the analysis of 3D shape from shading is primarily restricted to the caudal ITG areas. Additional results from psychophysical experiments reveal that this difference in neuronal substrate cannot be explained by a difference in strength between the 2 cues. These results underscore the importance of the posterior part of the lateral occipital complex for the extraction of visual 3D shape information from all depth cues, and they suggest strongly that the importance of shading is diminished relative to other cues for the analysis of 3D shape in parietal regions

Spatio-Temporal Brain Mapping of Motion-Onset VEPs Combined with fMRI and Retinotopic Maps

Neuroimaging studies have identified several motion-sensitive visual areas in the human brain, but the time course of their activation cannot be measured with these techniques. In the present study, we combined electrophysiological and neuroimaging methods (including retinotopic brain mapping) to determine the spatio-temporal profile of motion-onset visual evoked potentials for slow and fast motion stimuli and to localize its neural generators. We found that cortical activity initiates in the primary visual area (V1) for slow stimuli, peaking 100 ms after the onset of motion. Subsequently, activity in the mid-temporal motion-sensitive areas, MT+, peaked at 120 ms, followed by peaks in activity in the more dorsal area, V3A, at 160 ms and the lateral occipital complex at 180 ms. Approximately 250 ms after stimulus onset, activity fast motion stimuli was predominant in area V6 along the parieto-occipital sulcus. Finally, at 350 ms (100 ms after the motion offset) brain activity was visible again in area V1. For fast motion stimuli, the spatio-temporal brain pattern was similar, except that the first activity was detected at 70 ms in area MT+. Comparing functional magnetic resonance data for slow vs. fast motion, we found signs of slow-fast motion stimulus topography along the posterior brain in at least three cortical regions (MT+, V3A and LOR)

Phytoplankton responses to marine climate change – an introduction

Phytoplankton are one of the key players in the ocean and contribute approximately 50% to global primary production. They serve as the basis for marine food webs, drive chemical composition of the global atmosphere and thereby climate. Seasonal environmental changes and nutrient availability naturally influence phytoplankton species composition. Since the industrial era, anthropogenic climatic influences have increased noticeably – also within the ocean. Our changing climate, however, affects the composition of phytoplankton species composition on a long-term basis and requires the organisms to adapt to this changing environment, influencing micronutrient bioavailability and other biogeochemical parameters. At the same time, phytoplankton themselves can influence the climate with their responses to environmental changes. Due to its key role, phytoplankton has been of interest in marine sciences for quite some time and there are several methodical approaches implemented in oceanographic sciences. There are ongoing attempts to improve predictions and to close gaps in the understanding of this sensitive ecological system and its responses

Low-nutrient organic matter in the Sargasso Sea thermocline: A hypothesis for its role, identity, and carbon cycle implications

Despite slow nutrient supply to the subtropical surface ocean, its rates of annual inorganic carbon drawdown and net oxygen production are similar to those of nutrient-rich high latitude waters. This surprisingly rapid carbon drawdown, if due to the production and export of marine biomass, cannot be explained in terms of known nutrient supply mechanisms. Moreover, carbon budgets have failed to detect the export of this organic matter. One possible explanation is the export of nutrient-poor organic matter with a composition that avoids detection as sinking particles. We describe three signs of the decomposition of such organic matter in the shallow Sargasso Sea subsurface. First, summertime oxygen consumption at 80–400 m occurs without the rate of nitrate and phosphate production expected from the remineralization of marine biomass, matching the observed summertime mixed layer inorganic carbon drawdown. Second, a seasonal change in the 18O/16O of subsurface nitrate suggests summertime heterotrophic bacterial nitrate assimilation down to ~400 m, as may be required for the remineralization of nutrient-poor organic matter. Third, incubation of subsurface seawater leads to nitrate drawdown and heterotrophic bacterial growth, supporting the thermocline nitrate 18O/16O evidence for heterotrophic nitrate assimilation. These three pieces of evidence suggest the export of nutrient-poor organic matter from the surface at a rate adequate to explain net community production in the Sargasso Sea. We propose that transparent exopolymer particles or related compounds, generated by a nutrient-limited upper ocean ecosystem, comprise this nutrient-poor export, and that its properties cause its flux out of the euphotic zone to be underestimated by sediment traps. Such nutrient-poor organic matter would contribute little to fisheries, deep ocean carbon dioxide storage, or organic carbon burial, so that it may change our view of the significance of net community production in the subtropical ocea

Role of pelagic calcification and export of carbonate production in climate change

The marine carbon cycle constitutes a key component of the climate system. It has been shown that one-fourth of the anthropogenic CO2 emitted to the atmosphere is absorbed by the ocean, leading to the acidification of the surface ocean and the modification of seawater carbonate chemistry. This could have major impacts on the ocean biogeochemical carbon cycling and ecosystem dynamics. Yet, the resulting feedbacks on climate change are still poorly understood. Interdisciplinary biogeochemical investigations, assisted by remote sensing, have been conducted during three consecutive years along the shelf break of the Northern Bay of Biscay where coccolithophorid blooms dominated by Emiliania huxleyi are frequently and recurrently observed. Rates of various processes governing the coccolithophore ecosystem dynamics have been determined and air-sea CO2 fluxes evaluated. The key results will be presented and discussed to evaluate the role in climate regulation of calcification, primary production and export processes during coccolithophorid blooms

Role of pelagic calcification and export of carbonate production in climate change « PEACE » (SD/CS/03) - Final Report

The overall objective of the PEACE project is to evaluate the role in climate regulation of calcification, primary production and export processes during coccolithophorid blooms. We use a transdisciplinary approach that combines process-oriented field investigations with laboratory experiments and modelling tools. Specific objectives are: 1) to study the net ecosystem dynamics during coccolithophorid blooms, 2) to unravel the link between the bacterial community, grazing, transparent exopolymer particles (TEP) dynamics, carbon export and dimethylsulfide (DMS) cycling during coccolithophorid blooms, 3) to assess the effects of ocean acidification on coccolithophorid metabolism and TEP production, and 4) to model coccolithophorid dynamics and their impact on ocean dissolved inorganic carbon (DIC) chemistry

Functional neuroanatomy of biological motion perception in humans

We used whole brain functional MRI to investigate the neural network specifically engaged in the recognition of “biological motion” defined by point-lights attached to the major joints and head of a human walker. To examine the specificity of brain regions responsive to biological motion, brain activations obtained during a “walker vs. non-walker” discrimination task were compared with those elicited by two other tasks: (i) non-rigid motion (NRM), involving the discrimination of overall motion direction in the same “point-lights” display, and (ii) face-gender discrimination, involving the discrimination of gender in briefly presented photographs of men and women. Brain activity specific to “biological motion” recognition arose in the lateral cerebellum and in a region in the lateral occipital cortex presumably corresponding to the area KO previously shown to be particularly sensitive to kinetic contours. Additional areas significantly activated during the biological motion recognition task involved both, dorsal and ventral extrastriate cortical regions. In the ventral regions both face-gender discrimination and biological motion recognition elicited activation in the lingual and fusiform gyri and in the Brodmann areas 22 and 38 in superior temporal sulcus (STS). Along the dorsal pathway, both biological motion recognition and non-rigid direction discrimination gave rise to strong responses in several known motion sensitive areas. These included Brodmann areas 19/37, the inferior (Brodmann Area 39), and superior parietal lobule (Brodmann Area 7). Thus, we conjecture that, whereas face (and form) stimuli activate primarily the ventral system and motion stimuli primarily the dorsal system, recognition of biological motion stimuli may activate both systems as well as their confluence in STS. This hypothesis is consistent with our findings in stroke patients, with unilateral brain lesions involving at least one of these areas, who, although correctly reporting the direction of the point-light walker, fail on the biological motion task