Investigation of Staphylococcus aureus Bacteriophage Population at a South Carolina University: The Disappearance of S. aureus Bacteriophage Population Amidst the COVID-19 Pandemic

Bacteriophages are naturally occurring, nonpathogenic viruses, which infect bacterial cells. Recently, bacteriophage research has increased with hopes of using them against antibiotic resistant bacterial infections in the future. This study aimed to determine a possible correlation between perceived stress and the Staphylococcus aureus bacteriophage population at Coastal Carolina University (CCU), Conway, South Carolina, using isolation and characterization techniques to further understand humans as a potential bacteriophage source. From October 2020 to March 2021, nasal and postauricular swab samples were collected from 12 participants on a monthly basis along with a perceived stress survey. Samples were subjected to filtration, amplification, plaque assays, and PCR techniques to identify and characterize bacteriophage. The purpose of this study was to understand humans as a repository for bacteriophage and to understand factors, namely perceived stress, which affect bacteriophage presence on humans. Results suggested that possible changes due to the COVID-19 pandemic, such as increased stress levels, mask wearing, and constant hand washing/ sanitizing, caused a drastic decrease in the Escherichia coli and Staphylococcus aureus phage population at Coastal Carolina University

Inner versus outer E×B shear layer: an attempt to radially localize the L-H transition

EUROfusion Consortium 63305

Epidermal Growth Factor–PEG Functionalized PAMAM-Pentaethylenehexamine Dendron for Targeted Gene Delivery Produced by Click Chemistry

Aim of this study was the site-specific conjugation of an epidermal growth factor (EGF)-polyethylene glycol (PEG) chain by click chemistry onto a poly(amido amine) (PAMAM) dendron, as a key step toward defined multifunctional carriers for targeted gene delivery. For this purpose, at first propargyl amine cored PAMAM dendrons with ester ends were synthesized. The chain terminal ester groups were then modified by oligoamines with different secondary amino densities. The oligoamine-modified PAMAM dendrons were well biocompatible, as demonstrated in cytotoxicity assays. Among the different oligoamine-modified dendrons, PAMAM-pentaethylenehexamine (PEHA) dendron polyplexes displayed the best gene transfer ability. Conjugation of PAMAM-PEHA dendron with PEG spacer was conducted via click reaction, which was performed before amidation with PEHA. The resultant PEG-PAMAM-PEHA copolymer was then coupled with EGF ligand. pDNA transfections in HuH-7 hepatocellular carcinoma cells showed a 10-fold higher efficiency with the polyplexes containing conjugated EGF as compared to the ligand-free ones, demonstrating the concept of ligand targeting. Overall gene transfer efficiencies, however, were moderate, suggesting that additional measures for overcoming subsequent intracellular bottlenecks in delivery have to be taken

Generalized Hamiltonian structures for Ermakov systems

We construct Poisson structures for Ermakov systems, using the Ermakov invariant as the Hamiltonian. Two classes of Poisson structures are obtained, one of them degenerate, in which case we derive the Casimir functions. In some situations, the existence of Casimir functions can give rise to superintegrable Ermakov systems. Finally, we characterize the cases where linearization of the equations of motion is possible

Tachyon: Reliable, Memory Speed Storage for Cluster Computing Frameworks

Tachyon is a distributed file system enabling reliable data sharing at memory speed across cluster computing frameworks. While caching today improves read workloads, writes are either network or disk bound, as replication is used for fault-tolerance. Tachyon eliminates this bottleneck by pushing lineage, a well-known technique, into the storage layer. The key challenge in making a long-running lineage-based storage system is timely data recovery in case of failures. Tachyon addresses this issue by introducing a checkpointing algorithm that guarantees bounded recovery cost and resource allocation strategies for recomputation under commonly used resource schedulers. Our evaluation shows that Tachyon outperforms in-memory HDFS by 110x for writes. It also improves the end-to-end latency of a realistic workflow by 4x. Tachyon is open source and is deployed at multiple companies.National Science Foundation (U.S.) (CISE Expeditions Award CCF-1139158)Lawrence Berkeley National Laboratory (Award 7076018)United States. Defense Advanced Research Projects Agency (XData Award FA8750-12-2-0331

In-out charge exchange measurements and 3D modelling of diagnostic thermal neutrals to study edge poloidal impurity asymmetries

A new method was developed to model the neutral population produced by the gas puff based charge exchange recombination spectroscopy systems at ASDEX Upgrade (AUG). With this method, the edge impurity density on the high field side (HFS) and low field side (LFS) can be obtained without the need to apply a neutral beam injection system. The neutral penetration needed for the calculation of the impurity density is obtained with a new gas puff module implemented in the FIDASIM code. The LFS impurity density profile evaluated with the new gas puff module matches the impurity density calculated with standard beam-based charge exchange diagnostics. Impurity temperature, rotation and density profiles at the HFS and LFS of an AUG H-mode discharge are presented. Edge impurity toroidal and poloidal flows show asymmetric structures. The impurity density asymmetries obtained with the new gas puff module are consistent with the observed flow structure