Genotypic and Phenotypic Heterogeneity in Alicyclobacillus acidoterrestris: A Contribution to Species Characterization.

Alicyclobacillus acidoterrestris is the main cause of most spoilage problems in fruit juices and acidic products. Since soil borne species often contaminate fruit juices and do not need strict extreme requirements for survival, it is a great concern to investigate whether and how soil species could evolve from their ecological niches in microbial community to new environments as fruit juices. In this study, 23 isolates of thermo-acidophilic, spore-forming bacteria from soil were characterized by cultural and molecular methods. In addition, 2 strains isolated from a spoilage incident in pear juice were typed. Strains phenotyping showed that they could be grouped into 3 different clusters, and some isolates showed identical or quite similar patterns. Analyzing pH and temperature ranges for growth, the majority of strains were able to grow at values described for many species of Alicyclobacillus. Qualitative utilization of lysine, arginine and indole production from tryptophan revealed, for the first time, deamination of lysine and decarboxylation of arginine. Resistance to 5% NaCl as well as the ability to hydrolyze starch and gelatin, nitrate reduction, catalase and oxidase activities confirmed literature evidences. Examining of 16S rRNA, showed that isolates were divided into three blocks represented by effectively soil species and strains that are moving from soil to other possible growing source characterized by parameters that could strongly influence bacterial survival. RAPD PCR technique evidenced a great variability in banding patterns and, although it was not possible to obtain genotypically well-distinguished groups, it was feasible to appreciate genetic similarity between some strains. In conclusion, the investigation of a microbial community entails a combination of metagenomic and classic culturedependent approaches to expand our knowledge about Alicyclobacillus and to look for new subspecies

Dynamics of the solar photosphere: THEMIS observations

We present the results of 2D narrow- and broad-band photometry of quiet granulation field as observed at the center of the Sun by the THEMIS telescope in IPM mode. The broad-band spectral images have beenused to derive geometrical and statistical properties of the pattern produced by convective flows rising from deep layers of the Sun. The narrow-band spectral observations, in the C I 538.0 nm, Fe I 537.9 nm, and Fe I 557.6 nm photospheric lines, have been used to calculate velocity and intensity maps at different heights in the solar atmosphere. The autocorrelation functions of the velocity fields at different heights suggest that, near the solar surface, the dynamics resemble the behavior of a complex out-of-Equilibrium system, characterized by a dynamical heterogeneity. Conversely, in the middle photosphere, where only one characteristic time exists, the dynamical heterogeneity disappears. Moreover, the characteristic scales, derived from photospheric velocity maps by means of wavelet and information entropy analysis, show a dependence of their properties on the formation height of photospheric lines and an enlargement of the velocity features with height

Long-term response of stratospheric ozone and temperature to solar variability

The long-term variability in stratospheric ozone mass mixing ratio (O3) and temperature (T) from 1979 to 2013 is investigated using the latest reanalysis product delivered by the European Centre for Medium-Range Weather Forecasts (ECMWF), i.e., ERA-Interim. Moreover, using the Mg II index time series for the same time period, the response of the stratosphere to the 11-year Schwabe solar cycle is investigated. Results reveal the following features: (i) upward (downward) trends characterize zonally averaged O3 anomalies in the upper (middle to lower stratosphere) stratosphere, while prevailing downward trends affect the T field. Mg II index data exhibit a weaker 24th solar cycle (though not complete) when compared with the previous two; (ii) correlations between O3 and Mg II, T and Mg II, and O3 and T are consistent with photochemical reactions occurring in the stratosphere and large-scale transport; and (iii) wavelet cross-spectra between O3 and Mg II index show common power for the 11-year period, particularly in tropical regions around 30-50 hPa, and different relative phase in the upper and lower stratosphere. A comprehensive insight into the actual processes accounting for the observed correlation between ozone and solar UV variability would be gained from an improved bias correction of ozone measurements provided by different satellite instruments, and from the observations of the time behavior of the solar spectral irradiance

Compressive fluctuations in high-latitude solar wind

International audienceSolar wind compressive fluctuations at MHD scales have been extensively studied in the past using data from spacecraft on the ecliptic plane. In the present study, based on plasma and magnetic field measurements by Ulysses, a statistical analysis of the compressive fluctuations observed in the high-latitude solar wind is performed. Data are from the first out-of-ecliptic orbit of Ulysses, when the Sun's activity is low and the high-latitude heliosphere is characterized by the presence of a fast and relatively steady solar wind, the polar wind. Our analysis is based on the computation of hourly-scale correlation coefficients for several pairs of solar wind parameters such as velocity, density, temperature, magnetic field magnitude, and plasma pressures (thermal, magnetic, and total). The behaviour of the fluctuations in terms of their amplitude has been examined, too, and comparisons with the predictions of existing models have been performed. The results support the view that the compressive fluctuations in the polar solar wind are mainly a superposition of MHD compressive modes and of pressure-balanced structures. Nearly-incompressible effects do not seem to play a relevant role. In conclusion, our results about compressive fluctuations in the polar wind do not appear as a break with respect to previous low-latitude observations. However, our study clearly indicates that in a homogeneous environment, as the polar wind, the pressure-balanced fluctuations tend to play a major role. Key words. Interplanetary physics (MHD waves and turbulence; solar wind plasma) ? Space plasma physics (turbulence

A new search for anomalous neutrino oscillations at the CERN-PS

The LSND experiment has observed a 3.8 sigma excess of anti-nu_e events from an anti-nu_mu beam coming from pions at rest. If confirmed, the LSND anomaly would imply new physics beyond the standard model, presumably in the form of some additional sterile neutrinos. The MiniBooNE experiment at FNAL-Booster has further searched for the LSND anomaly. Above 475 MeV, the nu_e result is excluding the LSND anomaly to about 1.6 sigma but it introduces an unexplained, new 3.0 sigma anomaly at lower energies, down to 200 MeV. The nu_e data have so far an insufficient statistics to be conclusive with LSND's anti-nu_e. The present proposal at the CERN-PS is based on two strictly identical LAr-TPC detectors in the near and far positions, respectively at 127 and 850 m from the neutrino (or antineutrino) target and focussing horn, observing the electron-neutrino signal. This project will benefit from the already developed technology of ICARUS T600, well tested on surface in Pavia, without the need of any major R&D activity and without the added problems of an underground experiment (CNGS-2). The superior quality of the Liquid Argon imaging TPC and its unique electron - pi-zero discrimination allow full rejection of the NC background, without efficiency loss for electron neutrino detection. In two years of exposure, the far detector mass of 600 tons and a reasonable utilization of the CERN-PS with the refurbished previous TT7 beam line will allow to collect about 10^6 charged current events, largely adequate to settle definitely the LSND anomaly.Comment: 23 pages, 17 figures, added watermark, better referencin

Islet autoimmunity identifies a unique pattern of impaired pancreatic beta-cell function, markedly reduced pancreatic beta cell mass and insulin resistance in clinically diagnosed type 2 diabetes

There is a paucity of literature describing metabolic and histological data in adult-onset autoimmune diabetes. This subgroup of diabetes mellitus affects at least 5% of clinically diagnosed type 2 diabetic patients (T2DM) and it is termed Latent Autoimmune Diabetes in Adults (LADA). We evaluated indexes of insulin secretion, metabolic assessment, and pancreatic pathology in clinically diagnosed T2DM patients with and without the presence of humoral islet autoimmunity (Ab). A total of 18 patients with at least 5-year duration of clinically diagnosed T2DM were evaluated in this study. In those subjects we assessed acute insulin responses to arginine, a glucose clamp study, whole-body fat mass and fat-free mass. We have also analyzed the pancreatic pathology of 15 T2DM and 43 control cadaveric donors, using pancreatic tissue obtained from all the T2DM organ donors available from the nPOD network through December 31, 2013. The presence of islet Ab correlated with severely impaired β-cell function as demonstrated by remarkably low acute insulin response to arginine (AIR) when compared to that of the Ab negative group. Glucose clamp studies indicated that both Ab positive and Ab negative patients exhibited peripheral insulin resistance in a similar fashion. Pathology data from T2DM donors with Ab or the autoimmune diabetes associated DR3/DR4 allelic class II combination showed reduction in beta cell mass as well as presence of autoimmune-associated pattern A pathology in subjects with either islet autoantibodies or the DR3/DR4 genotype. In conclusion, we provide compelling evidence indicating that islet Ab positive long-term T2DM patients exhibit profound impairment of insulin secretion as well as reduced beta cell mass seemingly determined by an immune-mediated injury of pancreatic β-cells. Deciphering the mechanisms underlying beta cell destruction in this subset of diabetic patients may lead to the development of novel immunologic therapies aimed at halting the disease progression in its early stage

Long-term behavioral effects of prenatal stress in the Fmr1-knock-out mouse model for fragile X syndrome

Fragile X syndrome (FXS) is a major neurodevelopmental disorder and the most common monogenic cause of autism spectrum disorder (ASD). FXS is caused by a mutation in the X-linked FMR1 gene leading to the absence of the FMRP protein, inducing several behavioral deficits, including motor, emotional, cognitive, and social abnormalities. Beside its clear genetic origins, FXS can be modulated by environmental factors, e.g., stress exposure: indeed the behavioral phenotype of FXS, as well as of ASD patients can be exacerbated by the repeated experience of stressful events, especially early in life. Here we investigated the long-term effects of prenatal exposure to unpredictable chronic stress on the behavioral phenotype of the Fmr1-knock-out (KO) mouse model for FXS and ASD. Mice were tested for FXS- and ASD-relevant behaviors first at adulthood (3 months) and then at aging (18 months), in order to assess the persistence and the potential time-related progression of the stress effects. Stress induced the selective emergence of behavioral deficits in Fmr1-KO mice that were evident in spatial memory only at aging. Stress also exerted several age-specific behavioral effects in mice of both genotypes: at adulthood it enhanced anxiety levels and reduced social interaction, while at aging it enhanced locomotor activity and reduced the complexity of ultrasonic calls. Our findings underline the relevance of gene-environment interactions in mouse models of neurodevelopmental syndromes and highlight the long-term behavioral impact of prenatal stress in laboratory mice