Antibioticaresistentie in de biologische varkenshouderij: Komt MRSA ook voor bij biologische varkens en hun verzorgers?

Dit onderzoek bevestigt de verwachting dat binnen de biologische varkenshouderij MRSA minder frequent voorkomt dan in de gangbare varkenshouderij. Toch blijkt MRSA ook in de biologische varkenshouderij voor te komen en het is daarom van belang om eventuele risicofactoren voor MRSA te verkleinen

A new limit on the Ultra-High-Energy Cosmic-Ray flux with the Westerbork Synthesis Radio Telescope

A particle cascade (shower) in a dielectric, for example as initiated by an ultra-high energy cosmic ray, will have an excess of electrons which will emit coherent \v{C}erenkov radiation, known as the Askaryan effect. In this work we study the case in which such a particle shower occurs in a medium just below its surface. We show, for the first time, that the radiation transmitted through the surface is independent of the depth of the shower below the surface when observed from far away, apart from trivial absorption effects. As a direct application we use the recent results of the NuMoon project, where a limit on the neutrino flux for energies above $10^{22}$\,eV was set using the Westerbork Synthesis Radio Telescope by measuring pulsed radio emission from the Moon, to set a limit on the flux of ultra-high-energy cosmic rays.Comment: Accepted for publication in Phys. Rev.

The effect of the ionosphere on ultra-low-frequency radio-interferometric observations

Context. The ionosphere is the main driver of a series of systematic effects that limit our ability to explore the low-frequency (<1 GHz) sky with radio interferometers. Its effects become increasingly important towards lower frequencies and are particularly hard to calibrate in the low signal-to-noise ratio (S/N) regime in which low-frequency telescopes operate. Aims. In this paper we characterise and quantify the effect of ionospheric-induced systematic errors on astronomical interferometric radio observations at ultra-low frequencies (<100 MHz). We also provide guidelines for observations and data reduction at these frequencies with the LOw Frequency ARray (LOFAR) and future instruments such as the Square Kilometre Array (SKA). Methods. We derive the expected systematic error induced by the ionosphere. We compare our predictions with data from the Low Band Antenna (LBA) system of LOFAR. Results. We show that we can isolate the ionospheric effect in LOFAR LBA data and that our results are compatible with satellite measurements, providing an independent way to measure the ionospheric total electron content (TEC). We show how the ionosphere also corrupts the correlated amplitudes through scintillations. We report values of the ionospheric structure function in line with the literature. Conclusions. The systematic errors on the phases of LOFAR LBA data can be accurately modelled as a sum of four effects (clock, ionosphere first, second, and third order). This greatly reduces the number of required calibration parameters, and therefore enables new efficient calibration strategies

An air shower array for LOFAR: LORA

LOFAR is a new form of radio telescope which can detect radio emission from air showers induced by very high-energy cosmic rays. It can also look for radio emission from particle cascades on the Moon induced by ultra high-energy cosmic rays or neutrinos. To complement the radio detection, we are setting up a small particle detector array LORA (LOfar Radboud Air shower array) within an area of $\sim 300$ m diameter in the LOFAR core. It will help in triggering and confirming the radio detection of air showers with the LOFAR antennas. In this paper, we present a short overview about LORA and discuss its current status.Comment: 10 pages (using article.cls), 6 figures, accepted for the proceedings of 22nd European Cosmic Ray Symposium, 3-6 August 2010, Finlan

Complete Sequence of pSAM7, an IncX4 Plasmid Carrying a Novel bla[sub]CTX-M-14b Transposition Unit Isolated from ' Escherichia coli ' and ' Enterobacter cloacae ' from cattle

The same plasmid carrying blaCTX-M-14b was identified from an Escherichia coli isolate and an Enterobacter cloacae isolate collected from cattle in the United Kingdom by complete plasmid sequencing. This 35,341-bp plasmid, pSAM7, had an IncX4 backbone that is 99% identical to that of pJIE143 from a human isolate in Australia. PCR screening identified pSAM7-like plasmids in three other E. coli isolates of different multilocus sequence types isolated from cattle on different farms in the United Kingdom

Contaminants and micro-organisms in organic and conventional food products

In the Netherlands we investigated animal and plant products on potentially hazardous contamination with heavy metals, mycotoxins, pesticide residues, patho-genic micro-organisms and nitrate. In most cases, the organically produced foods had equal or lower amounts of contaminants than conventionally pro-duced products. These results conflict with a common idea that organic farming theoretically increases food safety risks. For many contaminants organic food showed a large diversity in the amount of contamina-tion. Experience with organic farming, managing and manure use partly explain these differences. Understanding of these cultivation parameters can help in further improvement of organic cultivation practices

Overview of lunar detection of ultra-high energy particles and new plans for the SKA

The lunar technique is a method for maximising the collection area for ultra-high-energy (UHE) cosmic ray and neutrino searches. The method uses either ground-based radio telescopes or lunar orbiters to search for Askaryan emission from particles cascading near the lunar surface. While experiments using the technique have made important advances in the detection of nanosecond-scale pulses, only at the very highest energies has the lunar technique achieved competitive limits. This is expected to change with the advent of the Square Kilometre Array (SKA), the low-frequency component of which (SKA-low) is predicted to be able to detect an unprecedented number of UHE cosmic rays. In this contribution, the status of lunar particle detection is reviewed, with particular attention paid to outstanding theoretical questions, and the technical challenges of using a giant radio array to search for nanosecond pulses. The activities of SKA’s High Energy Cosmic Particles Focus Group are described, as is a roadmap by which this group plans to incorporate this detection mode into SKA-low observations. Estimates for the sensitivity of SKA-low phases 1 and 2 to UHE particles are given, along with the achievable science goals with each stage. Prospects for near-future observations with other instruments are also described

The shufflon of IncI1 plasmids is rearranged constantly during different growth conditions

One of the factors that can affect conjugation of IncI1 plasmids, amongst others, is the genetic region known as the shufflon. This multiple inversion system modifies the pilus tip proteins used during conjugation, thus affecting the affinity for different recipient cells. Although recombination is known to occur in in vitro conditions, little is known about the regulation and the extent of recombination that occurs. To measure the recombination of the shufflon, we have amplified the entire shufflon region and sequenced the amplicons using nanopore long-read sequencing. This method was effective to determine the order of the segments of the shufflon and allow for the analysis of the shufflon variants that are present in a heterogeneous pool of templates. Analysis was performed over different growth phases and after addition of cefotaxime. Furthermore, analysis was performed in different E. coli host cells to determine if recombination is likely to be influenced. Recombination of the shufflon was constantly ongoing in all conditions that were measured, although no differences in the amount of different shufflon variants or the rate at which novel variants were formed could be found. As previously reported, some variants were abundant in the population while others were scarce. This leads to the conclusion that the shufflon is continuously recombining at a constant rate, or that the method used here was not sensitive enough to detect differences in this rate. For one of the plasmids, the host cell appeared to have an effect on the specific shufflon variants that were formed which were not predominant in another host, indicating that host factors may be involved. As previously reported, the pilV-A and pilV-A' ORFs are formed at higher frequencies than other pilV ORFs. These results demonstrate that the recombination that occurs within the shufflon is not random. While any regulation of the shufflon affected by these in vitro conditions could not be revealed, the method of amplifying large regions for long-read sequencing for the analysis of multiple inversion systems proved effective.</p