11,765 research outputs found
The free rigid body dynamics: generalized versus classic
In this paper we analyze the normal forms of a general quadratic Hamiltonian
system defined on the dual of the Lie algebra of real -
skew - symmetric matrices, where is an arbitrary real symmetric
matrix. A consequence of the main results is that any first-order autonomous
three-dimensional differential equation possessing two independent quadratic
constants of motion which admits a positive/negative definite linear
combination, is affinely equivalent to the classical "relaxed" free rigid body
dynamics with linear controls.Comment: 12 page
Two-component {CH} system: Inverse Scattering, Peakons and Geometry
An inverse scattering transform method corresponding to a Riemann-Hilbert
problem is formulated for CH2, the two-component generalization of the
Camassa-Holm (CH) equation. As an illustration of the method, the multi -
soliton solutions corresponding to the reflectionless potentials are
constructed in terms of the scattering data for CH2.Comment: 22 pages, 3 figures, draft, please send comment
Lagrangian Reduction, the Euler--Poincar\'{e} Equations, and Semidirect Products
There is a well developed and useful theory of Hamiltonian reduction for
semidirect products, which applies to examples such as the heavy top,
compressible fluids and MHD, which are governed by Lie-Poisson type equations.
In this paper we study the Lagrangian analogue of this process and link it with
the general theory of Lagrangian reduction; that is the reduction of
variational principles. These reduced variational principles are interesting in
their own right since they involve constraints on the allowed variations,
analogous to what one finds in the theory of nonholonomic systems with the
Lagrange d'Alembert principle. In addition, the abstract theorems about
circulation, what we call the Kelvin-Noether theorem, are given.Comment: To appear in the AMS Arnold Volume II, LATeX2e 30 pages, no figure
Complete integrability versus symmetry
The purpose of this article is to show that on an open and dense set,
complete integrability implies the existence of symmetry
Kinetic and ion pairing contributions in the dielectric spectra of electrolyte aqueous solutions
Understanding dielectric spectra can reveal important information about the
dynamics of solvents and solutes from the dipolar relaxation times down to
electronic ones. In the late 1970s, Hubbard and Onsager predicted that adding
salt ions to a polar solution would result in a reduced dielectric permittivity
that arises from the unexpected tendency of solvent dipoles to align opposite
to the applied field. So far, this effect has escaped an experimental
verification, mainly because of the concomitant appearance of dielectric
saturation from which the Hubbard-Onsager decrement cannot be easily separated.
Here we develop a novel non-equilibrium molecular dynamics simulation approach
to determine this decrement accurately for the first time. Using a
thermodynamic consistent all-atom force field we show that for an aqueous
solution containing sodium chloride around 4.8 Mol/l, this effect accounts for
12\% of the total dielectric permittivity. The dielectric decrement can be
strikingly different if a less accurate force field for the ions is used. Using
the widespread GROMOS parameters, we observe in fact an {\it increment} of the
dielectric permittivity rather than a decrement. We can show that this
increment is caused by ion pairing, introduced by a too low dispersion force,
and clarify the microscopic connection between long-living ion pairs and the
appearance of specific features in the dielectric spectrum of the solution
Emergent singular solutions of non-local density-magnetization equations in one dimension
We investigate the emergence of singular solutions in a non-local model for a
magnetic system. We study a modified Gilbert-type equation for the
magnetization vector and find that the evolution depends strongly on the length
scales of the non-local effects. We pass to a coupled density-magnetization
model and perform a linear stability analysis, noting the effect of the length
scales of non-locality on the system's stability properties. We carry out
numerical simulations of the coupled system and find that singular solutions
emerge from smooth initial data. The singular solutions represent a collection
of interacting particles (clumpons). By restricting ourselves to the
two-clumpon case, we are reduced to a two-dimensional dynamical system that is
readily analyzed, and thus we classify the different clumpon interactions
possible.Comment: 19 pages, 13 figures. Submitted to Phys. Rev.
Controlled DNA compaction within chromatin: the tail-bridging effect
We study the mechanism underlying the attraction between nucleosomes, the
fundamental packaging units of DNA inside the chromatin complex. We introduce a
simple model of the nucleosome, the eight-tail colloid, consisting of a charged
sphere with eight oppositely charged, flexible, grafted chains that represent
the terminal histone tails. We demonstrate that our complexes are attracted via
the formation of chain bridges and that this attraction can be tuned by
changing the fraction of charged monomers on the tails. This suggests a
physical mechanism of chromatin compaction where the degree of DNA condensation
can be controlled via biochemical means, namely the acetylation and
deacetylation of lysines in the histone tails.Comment: 4 pages, 5 figures, submitte
Mean-Field HP Model, Designability and Alpha-Helices in Protein Structures
Analysis of the geometric properties of a mean-field HP model on a square
lattice for protein structure shows that structures with large number of switch
backs between surface and core sites are chosen favorably by peptides as unique
ground states. Global comparison of model (binary) peptide sequences with
concatenated (binary) protein sequences listed in the Protein Data Bank and the
Dali Domain Dictionary indicates that the highest correlation occurs between
model peptides choosing the favored structures and those portions of protein
sequences containing alpha-helices.Comment: 4 pages, 2 figure
Induced activation in accelerator components
The residual activity induced in particle accelerators is a serious issue from the point of view of radiation safety as the long-lived radionuclides produced by fast or moderated neutrons and impact protons cause problems of radiation exposure for staff involved in the maintenance work and when decommissioning the facility. This paper presents activation studies of the magnets and collimators in the High Energy Beam Transport line of the European Spallation Source due to the backscattered neutrons from the target and also due to the direct proton interactions and their secondaries. An estimate of the radionuclide inventory and induced activation are predicted using the GEANT4 code
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