CTLA-4 rs231775 and risk of acute renal graft rejection: an updated meta-analysis with trial sequential analysis

Contrasting results exist on the association between CTLA-4 rs231775 and acute rejection in kidney transplant recipients. We herein conducted an updated systematic review with meta-analysis and trial sequential analysis (TSA) to clarify this relationship and to establish whether the current evidence is sufficient to draw firm conclusions. In addition, noteworthiness of significant pooled odds ratios (ORs) was estimated by false positive report probability (FPRP). A comprehensive search was performed through PubMed, Web of Knowledge, Cochrane Library and Open Grey up to October 2019. Fifteen independent cohorts, including a total of 5,401 kidney transplant recipients, were identified through the systematic review. Overall, no association was detected with the allelic (OR 1.07, 95% CI 0.88\u20131.30, P = 0.49), dominant (OR 0.94, 95% CI 0.73\u20131.22, P = 0.66) or the recessive (OR 1.18, 95% CI 0.97\u20131.43, P = 0.096) model of CTLA-4 rs231775. In each genetic model, the cumulative Z-curve in TSA crossed the futility boundary and entered the\ua0futility\ua0area. In addition, none of the significant genetic comparisons detected in the subsequent and sensitivity analyses or in previously reported meta-analyses were found to be noteworthy by FPRP. In conclusion, this study provides strong evidence that CTLA-4 rs231775 is not a clinically-relevant genetic risk determinant of acute rejection after renal transplantation

Constraining decaying dark energy density models with the CMB temperature-redshift relation

We discuss the thermodynamic and dynamical properties of a variable dark energy model with density scaling as $\rho_x \propto (1+z)^{m}$, z being the redshift. These models lead to the creation/disruption of matter and radiation, which affect the cosmic evolution of both matter and radiation components in the Universe. In particular, we have studied the temperature-redshift relation of radiation, which has been constrained using a recent collection of cosmic microwave background (CMB) temperature measurements up to $z \sim 3$. We find that, within the uncertainties, the model is indistinguishable from a cosmological constant which does not exchange any particles with other components. Future observations, in particular measurements of CMB temperature at large redshift, will allow to give firmer bounds on the effective equation of state parameter $w_{eff}$ for such types of dark energy models.Comment: 9 pages, 1 figure, to appear in the Proceedings of the 3rd Italian-Pakistani Workshop on Relativistic Astrophysics, Lecce 20-22 June 2011, published in Journal of Physics: Conference Series (JPCS

Photonic-crystal slabs with a triangular lattice of triangular holes investigated using a guided-mode expansion method

According to a recent proposal [S. Takayama et al., Appl. Phys. Lett. 87, 061107 (2005)], the triangular lattice of triangular air holes may allow to achieve a complete photonic band gap in two-dimensional photonic crystal slabs. In this work we present a systematic theoretical study of this photonic lattice in a high-index membrane, and a comparison with the conventional triangular lattice of circular holes, by means of the guided-mode expansion method whose detailed formulation is described here. Photonic mode dispersion below and above the light line, gap maps, and intrinsic diffraction losses of quasi-guided modes are calculated for the periodic lattice as well as for line- and point-defects defined therein. The main results are summarized as follows: (i) the triangular lattice of triangular holes does indeed have a complete photonic band gap for the fundamental guided mode, but the useful region is generally limited by the presence of second-order waveguide modes; (ii) the lattice may support the usual photonic band gap for even modes (quasi-TE polarization) and several band gaps for odd modes (quasi-TM polarization), which could be tuned in order to achieve doubly-resonant frequency conversion between an even mode at the fundamental frequency and an odd mode at the second-harmonic frequency; (iii) diffraction losses of quasi-guided modes in the triangular lattices with circular and triangular holes, and in line-defect waveguides or point-defect cavities based on these geometries, are comparable. The results point to the interest of the triangular lattice of triangular holes for nonlinear optics, and show the usefulness of the guided-mode expansion method for calculating photonic band dispersion and diffraction losses, especially for higher-lying photonic modes.Comment: 16 pages, 11 figure

Exponential decay properties of Wannier functions and related quantities

The spatial decay properties of Wannier functions and related quantities have been investigated using analytical and numerical methods. We find that the form of the decay is a power law times an exponential, with a particular power-law exponent that is universal for each kind of quantity. In one dimension we find an exponent of -3/4 for Wannier functions, -1/2 for the density matrix and for energy matrix elements, and -1/2 or -3/2 for different constructions of non-orthonormal Wannier-like functions.Comment: 4 pages, with 3 postscript figures embedded. Uses REVTEX and epsf macros. Also available at http://www.physics.rutgers.edu/~dhv/preprints/lh_wann/index.htm

Resolving the Formation of Protogalaxies. III. Feedback from the First Stars

The first stars form in dark matter halos of masses ~10^6 M_sun as suggested by an increasing number of numerical simulations. Radiation feedback from these stars expels most of the gas from their shallow potential well of their surrounding dark matter halos. We use cosmological adaptive mesh refinement simulations that include self-consistent Population III star formation and feedback to examine the properties of assembling early dwarf galaxies. Accurate radiative transport is modeled with adaptive ray tracing. We include supernova explosions and follow the metal enrichment of the intergalactic medium. The calculations focus on the formation of several dwarf galaxies and their progenitors. In these halos, baryon fractions in 10^8 solar mass halos decrease by a factor of 2 with stellar feedback and by a factor of 3 with supernova explosions. We find that radiation feedback and supernova explosions increase gaseous spin parameters up to a factor of 4 and vary with time. Stellar feedback, supernova explosions, and H_2 cooling create a complex, multi-phase interstellar medium whose densities and temperatures can span up to 6 orders of magnitude at a given radius. The pair-instability supernovae of Population III stars alone enrich the halos with virial temperatures of 10^4 K to approximately 10^{-3} of solar metallicity. We find that 40% of the heavy elements resides in the intergalactic medium (IGM) at the end of our calculations. The highest metallicity gas exists in supernova remnants and very dilute regions of the IGM.Comment: 15 pages, 16 figures, accepted to ApJ. Many changes, including estimates of metal line cooling. High resolution images and movies available at http://www.slac.stanford.edu/~jwise/research/PGalaxies3

Order-N Density-Matrix Electronic-Structure Method for General Potentials

A new order-N method for calculating the electronic structure of general (non-tight-binding) potentials is presented. The method uses a combination of the ``purification''-based approaches used by Li, Nunes and Vanderbilt, and Daw, and a representation of the density matrix based on ``travelling basis orbitals''. The method is applied to several one-dimensional examples, including the free electron gas, the ``Morse'' bound-state potential, a discontinuous potential that mimics an interface, and an oscillatory potential that mimics a semiconductor. The method is found to contain Friedel oscillations, quantization of charge in bound states, and band gap formation. Quantitatively accurate agreement with exact results is found in most cases. Possible advantages with regard to treating electron-electron interactions and arbitrary boundary conditions are discussed.Comment: 13 pages, REVTEX, 7 postscript figures (not quite perfect

Mixing Effects in the Crystallization of Supercooled Quantum Binary Liquids

By means of Raman spectroscopy of liquid microjets we have investigated the crystallization process of supercooled quantum liquid mixtures composed of parahydrogen (pH$_2$) diluted with small amounts of up to 5\% of either neon or orthodeuterium (oD$_2$), and of oD$_2$ diluted with either Ne or pH$_2$. We show that the introduction of Ne impurities affects the crystallization kinetics in both the pH$_2$-Ne and oD$_2$-Ne mixtures in terms of a significant reduction of the crystal growth rate, similarly to what found in our previous work on supercooled pH$_2$-oD$_2$ liquid mixtures [M. K\"uhnel et {\it al.}, Phys. Rev. B \textbf{89}, 180506(R) (2014)]. Our experimental results, in combination with path-integral simulations of the supercooled liquid mixtures, suggest in particular a correlation between the measured growth rates and the ratio of the effective particle sizes originating from quantum delocalization effects. We further show that the crystalline structure of the mixture is also affected to a large extent by the presence of the Ne impurities, which likely initiate the freezing process through the formation of Ne crystallites.Comment: 19 pages, 7 figures, submitted to J. Chem. Phy

Dust emissivity in the Submm/Mm: SCUBA and SIMBA observations of Barnard 68

We have observed the dark cloud Barnard 68 with SCUBA at 850 um and with SIMBA at 1.2 mm. The submillimetre and millimetre dust emission correlate well with the extinction map of Alves, Lada and Lada (2001).The A_V/850um correlation is clearly not linear and suggests lower temperatures for the dust in the inner core of the cloud. Assuming a model for the temperature gradient, we derive the cloud-averaged dust emissivities (normalised to the V-Band extinction efficiency) at 850 um and 1.2 mm. We find k_850um/k_V = 4.0 +/- 1.0 x 10^-5 and k_1.2mm/k_V = 9.0 +/- 3.0 x 10^-6. These values are compared with other determinations in this wavelength regime and with expectations for models of diffuse dust and grain growth in dense clouds.Comment: 8 pages, 4 figures, A&A accepted (Letter), referee forma

On Star Formation and the Non-Existence of Dark Galaxies

We investigate whether a baryonic dark galaxy or `galaxy without stars' could persist indefinitely in the local universe, while remaining stable against star formation. To this end, a simple model has been constructed to determine the equilibrium distribution and composition of a gaseous protogalactic disk. Specifically, we determine the amount of gas that will transit to a Toomre unstable cold phase via the H2 cooling channel in the presence of a UV--X-ray cosmic background radiation field. All but one of the models are predicted to become unstable to star formation. Moreover, we find that all our model objects would be detectable via HI line emission, even in the case that star formation is potentially avoided. These results are consistent with the non-detection of isolated extragalactic HI clouds with no optical counterpart (galaxies without stars) by HIPASS. Additionally, where star formation is predicted to occur, we determine the minimum interstellar radiation field required to restore gravothermal stability, which we then relate to a minimum global star formation rate. This leads to the prediction of a previously undocumented relation between HI mass and star formation rate that is observed for a wide variety of dwarf galaxies in the HI mass range 10^8--10^10 M_sun. The existence of such a relation strongly supports the notion that the well observed population of dwarf galaxies represent the minimum rates of self-regulating star formation in the universe. (Barely abridged)Comment: 19 pages, 8 figures, TeX using emulateapj.cls, v2 accepted for publication in ApJ (16/8/5) with one figure deleted and a number of minor clarifying revision