Regulation of Gene Expression for L-Isoaspartyl O-Methyltransferases by Cis-Elements Associated with “Heat-Shock Polytene Chromosome Puffing Formation” in the Anhydrobiotic Midge

© 2016, Springer Science+Business Media New York.L-isoaspartyl O-methyltransferases (PIMTs) are known mostly because of their protein chain reparation activity in plant seeds, but also in many other organisms, from bacteria to mammals, including human. The main function of PIMT is recognition and methylation of spontaneously isomerized aspartate residue (Asp) in the amino acid sequences of cellular proteins, and thus preventing their conformation shifts and subsequent inactivation or loss of particular functions. The correlation between PIMT activity and accumulation of isomerized aspartate residues is well studied and used as a marker of isoAsp presence, whereas regulation pathways of PIMT genes are not clear yet. In our study, we propose a possible model for multiple paralogous PIMT gene regulation in the genome of an anhydrobiotic insect Polypedilum vanderplanki. Analysis of promoter regions revealed that PIMT genes possess enriched motif nearby +1 site, associated with GO term heat-shock polytene chromosome puffing. Poly(ADP-ribose) polymerase (PARP) is involved in this process of chromatin loosening and subsequent transcription activation of related genes. This result implied that expression of PIMT genes in P. vanderplanki could be regulated by chromatin modification

In Vitro Recombinant Expression of Novel Protective Protein Highly Accumulated in Dry State in an Anhydrobiotic Insect

© 2016, Springer Science+Business Media New York.Recent intensive studies showed that ability of several groups of organisms to withstand complete desiccation (anhydrobiosis state) is largely based on the activity of several groups of key proteins, including representatives of intrinsically disordered ones. In the largest known anhydrobiotic animal, the sleeping chironomid, both proteomic and genome-wide/targeted mRNA expression analysis suggest that several groups of the novel proteins greatly contribute to the formation of the molecular shield. Among them, 114 aa-long protein, dryporin. Being one of the most abundant in the desiccated larvae on protein level and showing one of the highest expression on mRNA level, this protein shows lack of the obvious homology with other known proteins. In this study, we successfully produced recombinant dryporin protein using BY-2 cell free lysate and showed the evidence of post-translational modification of the protein in the anhydrobiotic larvae

New Antioxidant Genes from an Anhydrobiotic Insect: Unique Structural Features in Functional Motifs of Thioredoxins

© 2016, Springer Science+Business Media New York.Polipedilum vanderplanki is the most complex known organism able to survive body desiccation via entering a state of suspended metabolism called anhydrobiosis. This unique ability is based on the specific molecular machinery involving a synthesis of non-reducing sugar trehalose and a variety of protective proteins. Genes encoding these protective proteins are extensively duplicated in the P. vanderplanki genome and become hugely upregulated in response to desiccation. Some of these highly expressed genes encode substitutions of amino acids crucial for the function of corresponding proteins. An intriguing group of protective proteins in P. vanderplanki are thioredoxins (TRX). These antioxidant proteins are important for P. vanderplanki anhydrobiosis since desiccation is tightly related to the elevated production of free radicals and oxidative damage. The TRX set is unprecedentedly expanded in the P. vanderplanki genome up to 25 TRX genes. Genomes of congeneric midge Polipedilum nubifer, Apis mellifera, Drosophila melanogaster, and Anopheles gambiae encode only 3–7 TRX genes. Moreover, all three P. vanderplanki thioredoxin genes most expressed at 24 h of P. vanderplanki larva desiccation encode for proteins missing the typical CxxC motif

Genetic background of enhanced radioresistance in an anhydrobiotic insect: transcriptional response to ionizing radiations and desiccation

© 2016, Springer Japan.It is assumed that resistance to ionizing radiation, as well as cross-resistance to other abiotic stresses, is a side effect of the evolutionary-based adaptation of anhydrobiotic animals to dehydration stress. Larvae of Polypedilum vanderplanki can withstand prolonged desiccation as well as high doses of ionizing radiation exposure. For a further understanding of the mechanisms of cross-tolerance to both types of stress exposure, we profiled genome-wide mRNA expression patterns using microarray techniques on the chironomid larvae collected at different stages of desiccation and after exposure to two types of ionizing radiation—70 Gy of high-linear energy transfer (LET) ions (4He) and the same dose of low-LET radiation (gamma rays). In expression profiles, a wide transcriptional response to desiccation stress that much exceeded the amount of up-regulated transcripts to irradiation exposure was observed. An extensive group of coincidently up-regulated overlapped transcripts in response to desiccation and ionizing radiation was found. Among this, overlapped set of transcripts was indicated anhydrobiosis-related genes: antioxidants, late embryogenesis abundant (LEA) proteins, and heat-shock proteins. The most overexpressed group was that of protein-L-isoaspartate/D-aspartate O-methyltransferase (PIMT), while probes, corresponding to LEA proteins, were the most represented. Performed functional analysis showed strongly enriched gene ontology terms associated with protein methylation. In addition, active processes of DNA repair were detected. We assume that the cross-tolerance of the sleeping chironomid to both desiccation and irradiation exposure comes from a complex mechanism of adaptation to anhydrobiosis

Anhydrobiosis-Associated Nuclear DNA Damage and Repair in the Sleeping Chironomid: Linkage with Radioresistance

Anhydrobiotic chironomid larvae can withstand prolonged complete desiccation as well as other external stresses including ionizing radiation. To understand the cross-tolerance mechanism, we have analyzed the structural changes in the nuclear DNA using transmission electron microscopy and DNA comet assays in relation to anhydrobiosis and radiation. We found that dehydration causes alterations in chromatin structure and a severe fragmentation of nuclear DNA in the cells of the larvae despite successful anhydrobiosis. Furthermore, while the larvae had restored physiological activity within an hour following rehydration, nuclear DNA restoration typically took 72 to 96 h. The DNA fragmentation level and the recovery of DNA integrity in the rehydrated larvae after anhydrobiosis were similar to those of hydrated larvae irradiated with 70 Gy of high-linear energy transfer (LET) ions (4He). In contrast, low-LET radiation (gamma-rays) of the same dose caused less initial damage to the larvae, and DNA was completely repaired within within 24 h. The expression of genes encoding the DNA repair enzymes occurred upon entering anhydrobiosis and exposure to high- and low-LET radiations, indicative of DNA damage that includes double-strand breaks and their subsequent repair. The expression of antioxidant enzymes-coding genes was also elevated in the anhydrobiotic and the gamma-ray-irradiated larvae that probably functions to reduce the negative effect of reactive oxygen species upon exposure to these stresses. Indeed the mature antioxidant proteins accumulated in the dry larvae and the total activity of antioxidants increased by a 3–4 fold in association with anhydrobiosis. We conclude that one of the factors explaining the relationship between radioresistance and the ability to undergo anhydrobiosis in the sleeping chironomid could be an adaptation to desiccation-inflicted nuclear DNA damage. There were also similarities in the molecular response of the larvae to damage caused by desiccation and ionizing radiation

Critical role of TLR2 and MyD88 for functional response of macrophages to a group IIA-Secreted phospholipase A2 from snake venom

artículo (arbitrado) -- Universidad de Costa Rica, Instituto de Investigaciones Clodomiro Picado. 2014The snake venom MT-III is a group IIA secreted phospholipase A2 (sPLA2) enzyme with functional and structural similarities with mammalian pro-inflammatory sPLA2s of the same group. Previously, we demonstrated that MT-III directly activates the innate inflammatory response of macrophages, including release of inflammatory mediators and formation of lipid droplets (LDs). However, the mechanisms coordinating these processes remain unclear. In the present study, by using TLR22/2 or MyD882/2 or C57BL/6 (WT) male mice, we report that TLR2 and MyD88 signaling have a critical role in MT-III-induced inflammatory response in macrophages. MT-III caused a marked release of PGE2, PGD2, PGJ2, IL-1b and IL-10 and increased the number of LDs in WT macrophages. In MT-III-stimulated TLR22/2 macrophages, formation of LDs and release of eicosanoids and cytokines were abrogated. In MyD882/2 macrophages, MT-III-induced release of PGE2, IL-1b and IL-10 was abrogated, but release of PGD2 and PGJ2 was maintained. In addition, COX-2 protein expression seen in MT-III-stimulated WT macrophages was abolished in both TLR22/2 and MyD882/2 cells, while perilipin 2 expression was abolished only in MyD882/2 cells. We further demonstrated a reduction of saturated, monounsaturated and polyunsaturated fatty acids and a release of the TLR2 agonists palmitic and oleic acid from MT-III-stimulated WT macrophages compared with WT control cells, thus suggesting these fatty acids as major messengers for MT-III-induced engagement of TLR2/MyD88 signaling. Collectively, our findings identify for the first time a TLR2 and MyD88-dependent mechanism that underlies group IIA sPLA2- induced inflammatory response in macrophages.This investigation was supported by research grants from FAPESP, Sao Paulo, Brazil (www.fapesp.br), grants 11/21341-5 and 10/06345-1, INCTTOX, Sao Paulo, Brazil (www.incttox.com.br), grant 573790/2008-6, CNPq PQ, Brazil (www.cnpq.br), grant 306920/2011-5, Brazil, Spanish Ministery of Science and Innovation, Spain (http://web.micinn.es/), grant BFU2010-18826.UCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias de la Salud::Instituto Clodomiro Picado (ICP

Regulation of Gene Expression for L-Isoaspartyl O-Methyltransferases by Cis-Elements Associated with “Heat-Shock Polytene Chromosome Puffing Formation” in the Anhydrobiotic Midge

© 2016, Springer Science+Business Media New York.L-isoaspartyl O-methyltransferases (PIMTs) are known mostly because of their protein chain reparation activity in plant seeds, but also in many other organisms, from bacteria to mammals, including human. The main function of PIMT is recognition and methylation of spontaneously isomerized aspartate residue (Asp) in the amino acid sequences of cellular proteins, and thus preventing their conformation shifts and subsequent inactivation or loss of particular functions. The correlation between PIMT activity and accumulation of isomerized aspartate residues is well studied and used as a marker of isoAsp presence, whereas regulation pathways of PIMT genes are not clear yet. In our study, we propose a possible model for multiple paralogous PIMT gene regulation in the genome of an anhydrobiotic insect Polypedilum vanderplanki. Analysis of promoter regions revealed that PIMT genes possess enriched motif nearby +1 site, associated with GO term heat-shock polytene chromosome puffing. Poly(ADP-ribose) polymerase (PARP) is involved in this process of chromatin loosening and subsequent transcription activation of related genes. This result implied that expression of PIMT genes in P. vanderplanki could be regulated by chromatin modification

Regulation of Gene Expression for L-Isoaspartyl O-Methyltransferases by Cis-Elements Associated with “Heat-Shock Polytene Chromosome Puffing Formation” in the Anhydrobiotic Midge

© 2016, Springer Science+Business Media New York.L-isoaspartyl O-methyltransferases (PIMTs) are known mostly because of their protein chain reparation activity in plant seeds, but also in many other organisms, from bacteria to mammals, including human. The main function of PIMT is recognition and methylation of spontaneously isomerized aspartate residue (Asp) in the amino acid sequences of cellular proteins, and thus preventing their conformation shifts and subsequent inactivation or loss of particular functions. The correlation between PIMT activity and accumulation of isomerized aspartate residues is well studied and used as a marker of isoAsp presence, whereas regulation pathways of PIMT genes are not clear yet. In our study, we propose a possible model for multiple paralogous PIMT gene regulation in the genome of an anhydrobiotic insect Polypedilum vanderplanki. Analysis of promoter regions revealed that PIMT genes possess enriched motif nearby +1 site, associated with GO term heat-shock polytene chromosome puffing. Poly(ADP-ribose) polymerase (PARP) is involved in this process of chromatin loosening and subsequent transcription activation of related genes. This result implied that expression of PIMT genes in P. vanderplanki could be regulated by chromatin modification

In Vitro Recombinant Expression of Novel Protective Protein Highly Accumulated in Dry State in an Anhydrobiotic Insect

© 2016, Springer Science+Business Media New York.Recent intensive studies showed that ability of several groups of organisms to withstand complete desiccation (anhydrobiosis state) is largely based on the activity of several groups of key proteins, including representatives of intrinsically disordered ones. In the largest known anhydrobiotic animal, the sleeping chironomid, both proteomic and genome-wide/targeted mRNA expression analysis suggest that several groups of the novel proteins greatly contribute to the formation of the molecular shield. Among them, 114 aa-long protein, dryporin. Being one of the most abundant in the desiccated larvae on protein level and showing one of the highest expression on mRNA level, this protein shows lack of the obvious homology with other known proteins. In this study, we successfully produced recombinant dryporin protein using BY-2 cell free lysate and showed the evidence of post-translational modification of the protein in the anhydrobiotic larvae