Phocidae species in Azores archipelago

List of Phocidae species recorded in Azores archipelago (Portugal).FUNDING: Azores PO 2020 - ACORES-01-0145-FEDER-000072. This project was financed by FEDER in 85% and by Azorean Public funds by 15% through Operational Program Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127.info:eu-repo/semantics/publishedVersio

Occurrences of Sea turtles in Azores Archipelago

Sea turtles are the best-known and more widespread marine reptiles. However, information on their distribution and the occurrence of most species, except for nesting beaches, remains scarce and sporadic, depending on sightings from fishing vessels, tourist activities and occurrences in coastal areas as well as fishing bycatch. Since the last updated species’ list for the Azores (Santos et al, 2010), no new species’ record was known for Azorean waters, until October 2020, with the confirmed sighting of an Olive Ridley, Lepidochelys olivacea (Eschscholtz, 1829) (Barcelos et al. 2021). After that, in February 2021, a second individual was found stranded on Pico Island, already in an advanced state of decomposition. This increased the number of species present in Azores EEZ (Exclusive Economic Zone) to six out of the seven extant worldwide. The remaining one, Natator depressus (Garman, 1880), is native to the Indo-pacific (see Red List Standards & Petitions Subcommittee, 1996).FUNDING: AZORESBIOPORTAL – PORBIOTA (Azores PO 2020 - ACORES-01-0145-FEDER-000072) TOTAL BUDGET: 299. 901,83€ EU Support: 254. 916, 56€ This project was financed by FEDER in 85% and by Azorean Public funds by 15% through Operational Program Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127. For the period 2022-2023- Portal da Biodiversidade dos Açores (2022-2023) - PO Azores Project - M1.1.A/INFRAEST CIENT/001/2022.info:eu-repo/semantics/publishedVersio

Occurrences of pinnipeds (Carnivora, Phocidae) in the Azores archipelago (Portugal)

An inventory of historical and actual occurrences of pinnipeds in the Azores archipelago. The data used come from Silva et al. (2009) and from RACA - Rede de Arrojamentos de Cetáceos dos Açores (RACA-DRAM-RAA).FUNDING: Azores PO 2020 - ACORES-01-0145-FEDER-000072. This project was financed by FEDER in 85% and by Azorean Public funds by 15% through Operational Program Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127.info:eu-repo/semantics/publishedVersio

Pinniped (Carnivora, Phocidae) occurrences in the Azores Archipelago (NE Atlantic)

BACKGROUND: The last Pinniped species update was in 2010, as part of the list of the terrestrial and marine biota from the Azores. This list includes a chapter dedicated to marine mammals, based on previously published bibliography. NEW INFORMATION: No new species were added since that list was published. However, there were new occurrences since the last update.Funding Institutions: AZORESBIOPORTAL – PORBIOTA (Azores PO 2020 - ACORES-01-0145-FEDER-000072) TOTAL BUDGET: €299,901.83 EU Support: €254, 916.56. This project was financed by FEDER in 85% and by Azorean Public funds by 15% through the Operational Programme Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127. For the period 2022-2023- Portal da Biodiversidade dos Açores (2022-2023) - PO Azores Project - M1.1.A/INFRAEST CIENT/001/2022. Open access will be supported by the project FCT-UIDB/00329/2020-2024 (Thematic Line 1 – integrated ecological assessment of environmental change on biodiversity).info:eu-repo/semantics/publishedVersio

Azores Sea turtles updated checklist

Sea turtles are the best-known and more widespread marine reptiles. However, information on their distribution and the occurrence of most species, except for nesting beaches, remains scarce and sporadic, depending on sightings from fishing vessels, tourist activities and occurrences in coastal areas as well as fishing bycatch. Since the last updated species’ list for the Azores (Santos et al, 2010), no new species’ record was known for Azorean waters, until October 2020, with the confirmed sighting of an Olive Ridley, Lepidochelys olivacea (Eschscholtz, 1829) (Barcelos et al. 2021). After that, in February 2021, a second individual was found stranded on Pico Island, already in an advanced state of decomposition. This increased the number of species present in Azores EEZ (Exclusive Economic Zone) to six out of the seven extant worldwide. The remaining one, Natator depressus (Garman, 1880), is native to the Indo-pacific (see Red List Standards & Petitions Subcommittee, 1996).FUNDING: AZORESBIOPORTAL – PORBIOTA (Azores PO 2020 - ACORES-01-0145-FEDER-000072) TOTAL BUDGET: 299. 901,83€ EU Support: 254. 916, 56€ This project was financed by FEDER in 85% and by Azorean Public funds by 15% through Operational Program Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127. For the period 2022-2023- Portal da Biodiversidade dos Açores (2022-2023) - PO Azores Project - M1.1.A/INFRAEST CIENT/001/2022.info:eu-repo/semantics/publishedVersio

Sea turtle (Reptilia, Testudines) diversity and occurrence in the Azores Archipelago (NE Atlantic)

BACKGROUND: Six species of marine turtles occur in the Azores Archipelago. The loggerhead, Caretta caretta (Linnaeus, 1758), is by far the most common species and is being constantly monitored and tagged by a joint project between the University of the Azores and the University of Florida since 1989. With the implementation of the tuna fishery observers (for dolphin safe seals), an increment of sea turtle reports has been verified as expected. The leather back turtle, Dermochelys coriacea (Vandelli, 1761) is the second most observed species in the Azores' EEZ, a fact probably also linked to the tuna fishery observation programme. All other species are occasional/vagrant albeit the green turtle, Chelonia mydas (Linnaeus, 1758) is more commonly seen than the others. Historically, sea turtles were occasionally taken for food in specific fishing villages and ports. Since 1986, sea turtles, as well as all marine mammals, are fully protected in the Azores although human-related activities (e.g. plastics, discarded fishing gear) do generate serious injuries and deaths. NEW INFORMATION: In this paper, we update sea turtle species' checklist for the Azores and give detailed geographic coordinates on their known occurrences.FUNDING: Funding Institutions: AZORESBIOPORTAL – PORBIOTA (Azores PO 2020 - ACORES-01-0145-FEDER-000072). This project was financed by FEDER in 85% and by Azorean Public funds by 15% through Operational Program Azores 2020. This work is also funded by FEDER funds through the COMPETE 2020 Programme and National Funds through FCT - Portuguese Foundation for Science and Technology under the Research Infrastructure PORBIOTA - Portuguese E-Infrastructure for Information and Research on Biodiversity, project number POCI-01-0145-FEDER-022127. For the period 2022-2023- Portal da Biodiversidade dos Açores (2022-2023) - PO Azores Project - M1.1.A/INFRAEST CIENT/001/2022. OPEN ACCESS will be supported by the project FCT-UIDB/00329/2020-2024 (Thematic Line 1 – integrated ecological assessment of environmental change on biodiversity).info:eu-repo/semantics/publishedVersio

IMP dehydrogenase rod/ring structures in acral melanomas

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Acral lentiginous melanoma (ALM) is a rare subtype of melanoma with aggressive behavior. IMPDH enzyme, involved in de novo GTP biosynthesis, has been reported to assemble into large filamentary structures called rods/rings (RR) or cytoophidium (cellular snakes). RR assembly induces a hyperactive state in IMPDH, usually to supply a high demand for GTP nucleotides, such as in highly proliferative cells. We investigate whether aggressive melanoma tumor cells present IMPDH-based RR structures. Forty-five ALM paraffin-embedded tissue samples and 59 melanocytic nevi were probed with anti-IMPDH2 antibody. Both the rod- and ring-shaped RR could be observed, with higher frequency in ALM. ROC curve analyzing the proportions of RR-positive cells in ALM versus nevi yielded a 0.88 AUC. Using the cutoff of 5.5% RR-positive cells, there was a sensitivity of 80% and specificity of 85% for ALM diagnosis. In ALM, 36 (80%) showed RR frequency above the cutoff, being classified as RR-positive, compared with only 9 (15%) of the nevi (p 4.0mm, compared with only 29% in the RR-low/negative (p = .039). We propose that screening for RR structures in biopsy specimens may be a valuable tool helping differentiate ALM from nevi and accessing tumor malignancy

Testing a global standard for quantifying species recovery and assessing conservation impact.

Recognizing the imperative to evaluate species recovery and conservation impact, in 2012 the International Union for Conservation of Nature (IUCN) called for development of a "Green List of Species" (now the IUCN Green Status of Species). A draft Green Status framework for assessing species' progress toward recovery, published in 2018, proposed 2 separate but interlinked components: a standardized method (i.e., measurement against benchmarks of species' viability, functionality, and preimpact distribution) to determine current species recovery status (herein species recovery score) and application of that method to estimate past and potential future impacts of conservation based on 4 metrics (conservation legacy, conservation dependence, conservation gain, and recovery potential). We tested the framework with 181 species representing diverse taxa, life histories, biomes, and IUCN Red List categories (extinction risk). Based on the observed distribution of species' recovery scores, we propose the following species recovery categories: fully recovered, slightly depleted, moderately depleted, largely depleted, critically depleted, extinct in the wild, and indeterminate. Fifty-nine percent of tested species were considered largely or critically depleted. Although there was a negative relationship between extinction risk and species recovery score, variation was considerable. Some species in lower risk categories were assessed as farther from recovery than those at higher risk. This emphasizes that species recovery is conceptually different from extinction risk and reinforces the utility of the IUCN Green Status of Species to more fully understand species conservation status. Although extinction risk did not predict conservation legacy, conservation dependence, or conservation gain, it was positively correlated with recovery potential. Only 1.7% of tested species were categorized as zero across all 4 of these conservation impact metrics, indicating that conservation has, or will, play a role in improving or maintaining species status for the vast majority of these species. Based on our results, we devised an updated assessment framework that introduces the option of using a dynamic baseline to assess future impacts of conservation over the short term to avoid misleading results which were generated in a small number of cases, and redefines short term as 10 years to better align with conservation planning. These changes are reflected in the IUCN Green Status of Species Standard