Quorum sensing influences growth and photosynthetic membrane production in high-cell-density cultivations of Rhodospirillum rubrum

BACKGROUND: The facultative anoxygenic photosynthetic bacterium Rhodospirillum rubrum exhibits versatile metabolic activity allowing the adaptation to rapidly changing growth conditions in its natural habitat, the microaerobic and anoxic zones of stagnant waters. The microaerobic growth mode is of special interest as it allows the high-level expression of photosynthetic membranes when grown on succinate and fructose in the dark, which could significantly simplify the industrial production of compounds associated with PM formation. However, recently we showed that PM synthesis is no longer inducible when R. rubrum cultures are grown to high cell densities under aerobic conditions. In addition a reduction of the growth rate and the continued accumulation of precursor molecules for bacteriochlorophyll synthesis were observed under high cell densities conditions. RESULTS: In the present work, we demonstrate that the cell density-dependent effects are reversible if the culture supernatant is replaced by fresh medium. We identified six N-acylhomoserine lactones and show that four of them are produced in varying amounts according to the growth phase and the applied growth conditions. Further, we demonstrate that N-acylhomoserine lactones and tetrapyrrole compounds released into the growth medium affect the growth rate and PM expression in high cell density cultures. CONCLUSIONS: In summary, we provide evidence that R. rubrum possesses a Lux-type quorum sensing system which influences the biosynthesis of PM and the growth rate and is thus likely to be involved in the phenotypes of high cell density cultures and the rapid adaptation to changing environmental conditions

Fast, inexpensive, and reliable HPLC method to determine monomer fractions in poly(3-hydroxybutyrate-co-3-hydroxyvalerate)

The determination of the monomer fractions in polyhydroxyalkanoates is of great importance for research on microbial-produced plastic material. The development of new process designs, the validation of mathematical models, and intelligent control strategies for production depend enormously on the correctness of the analyzed monomer fractions. Most of the available detection methods focus on the determination of the monomer fractions of the homopolymer poly(3-hydroxybutyrate). Only a few can analyze the monomer content in copolymers such as poly(3-hydroxybutyrate-co-3-hydroxyvalerate), which usually require expensive measuring devices, a high preparation time or the use of environmentally harmful halogenated solvents such as chloroform or dichloromethane. This work presents a fast, simple, and inexpensive method for the analysis of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) with high-performance liquid chromatography. Samples from a bioreactor experiment for the production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) with Cupriavidus necator H16 were examined regarding their monomer content using the new method and gas chromatography analysis, one of the most frequently used methods in literature. The results from our new method were validated using gas chromatography measurements and show excellent agreement. Key points ∙ The presented HPLC method is an inexpensive, fast and environmentally friendly alternative to existing methods for quantification of monomeric composition of PHBV. ∙ Validation with state of the art GC measurement exhibits excellent agreement over a broad range of PHBV monomer fractions

Motor skill learning-induced functional plasticity in the primary somatosensory cortex: A comparison between young and older adults

While in young adults (YAs) the underlying neural mechanisms of motor learning are well-studied, studies on the involvement of the somatosensory system during motor skill learning in older adults (OAs) remain sparse. Therefore, the aim of the present study was to investigate motor learning-induced neuroplasticity in the primary somatosensory cortex (S1) in YAs and OAs. Somatosensory evoked potentials (SEPs) were used to quantify somatosensory activation prior and immediately after motor skill learning in 20 right-handed healthy YAs (age range: 19–35 years) and OAs (age range: 57–76 years). Participants underwent a single session of a 30-min co-contraction task of the abductor pollicis brevis (APB) and deltoid muscle. To assess the effect of motor learning, muscle onset asynchrony (MOA) between the onsets of the contractions of both muscles was measured using electromyography monitoring. In both groups, MOA shortened significantly during motor learning, with YAs showing bigger reductions. No changes were found in SEP amplitudes after motor learning in both groups. However, a correlation analysis revealed an association between baseline SEP amplitudes of the N20/P25 and N30 SEP component and the motor learning slope in YAs such that higher amplitudes are related to higher learning. Hence, the present findings suggest that SEP amplitudes might serve as a predictor of individual motor learning success, at least in YAs. Additionally, our results suggest that OAs are still capable of learning complex motor tasks, showing the importance of motor training in higher age to remain an active part of our society as a prevention for care dependency

Algorithmic Interpretations of Fractal Dimension

We study algorithmic problems on subsets of Euclidean space of low fractal dimension. These spaces are the subject of intensive study in various branches of mathematics, including geometry, topology, and measure theory. There are several well-studied notions of fractal dimension for sets and measures in Euclidean space. We consider a definition of fractal dimension for finite metric spaces which agrees with standard notions used to empirically estimate the fractal dimension of various sets. We define the fractal dimension of some metric space to be the infimum delta>0, such that for any eps>0, for any ball B of radius r >= 2eps, and for any eps-net N, we have |B cap N|=O((r/eps)^delta). Using this definition we obtain faster algorithms for a plethora of classical problems on sets of low fractal dimension in Euclidean space. Our results apply to exact and fixed-parameter algorithms, approximation schemes, and spanner constructions. Interestingly, the dependence of the performance of these algorithms on the fractal dimension nearly matches the currently best-known dependence on the standard Euclidean dimension. Thus, when the fractal dimension is strictly smaller than the ambient dimension, our results yield improved solutions in all of these settings. We remark that our definition of fractal definition is equivalent up to constant factors to the well-studied notion of doubling dimension. However, in the problems that we consider, the dimension appears in the exponent of the running time, and doubling dimension is not precise enough for capturing the best possible such exponent for subsets of Euclidean space. Thus our work is orthogonal to previous results on spaces of low doubling dimension; while algorithms on spaces of low doubling dimension seek to extend results from the case of low dimensional Euclidean spaces to more general metric spaces, our goal is to obtain faster algorithms for special pointsets in Euclidean space

"Bildkritik" in der Windenergieplanung - Wie durch partizipative Prozessgestaltung ein sachlicher Bilderdiskurs gefördert werden kann

Konflikte um den Bau von Windenergieanlagen sind häufig auch Konflikte um Bilder. Konfliktparteien verwenden Bilder, um die angenommenen Wirkungen von Anlagen darzustellen und ihre Positionen zum Vorhaben zu untermauern. Unterschiedliche Wirklichkeitskonstruktionenringen um Deutungshoheit in der Öffentlichkeit und bereiten Dritten Schwierigkeiten, zwischen seriösen und manipulativen Darstellungen zu unterscheiden. Der Beitrag zeigt auf, wie im Rahmen partizipativer und transparenter Erstellungsprozesse zu Visualisierungen von geplanten Windenergieanlagen Wissen und die Fähigkeit zur "Bildkritik" - analog zur Quellenkritik im Medienjournalismus - gesteigert werden kann. Es werden Wege vorgestellt, die dazu beitragen, die Reflexionsfähigkeit und Kritikfähigkeit allgemein und insbesondere von jenen zu verbessern, die über Planungen zu befinden haben (Kommunalpolitik, Verwaltung, Presse).Damit wird sichergestellt,dass verantwortliche Personenkreise "Interpretationskompetenz" oder "Lese- und Sprechfähigkeit" zur Deutung von Bildern er- langen. Dabei greift der Beitrag auf sozialkonstruktivistische Ansätze der Landschaftsbildbewertung zurück und demonstriert anhand von Beispielen aus der Planungspraxis, wie erkenntnisfördernde Bilddiskurse gestaltet werden können.Planning processes of windfarms are often characterised by image conflicts. Conflicting parties use visualisations of the planned project to picture the assumed impact on the landscape and to underscore their opposing positions to the project. For observers and decision-makers (e.g. municipal leaders, administrators) it is often difficult to distinguish realistic visualisations from manipulative ones. This paper presents ways in which observers may acquire a competence in 'reading' and assessing visualised windfarms - similar to the critical competence in assessing the validity of media sources. The paper also presents criteria for the different states of the visualisation process - from the context of pro[1]duction, to image processing to modes of presentation. These criteria render pictures more transparent and thus may help observers base their interpretations on sounder reasoning. Drawing on social constructivist theories of landscape inter pretation and on extensive experience in conflict moderation, the paper demonstrates how a public planning dialogue, in which contradicting pictures claim validity, may be designed in order to clarify the value of each visualisation for the public

Ciliary Proteins Repurposed by the Synaptic Ribbon: Trafficking Myristoylated Proteins at Rod Photoreceptor Synapses

The Unc119 protein mediates transport of myristoylated proteins to the photoreceptor outer segment, a specialized primary cilium. This transport activity is regulated by the GTPase Arl3 as well as by Arl13b and Rp2 that control Arl3 activation/inactivation. Interestingly, Unc119 is also enriched in photoreceptor synapses and can bind to RIBEYE, the main component of synaptic ribbons. In the present study, we analyzed whether the known regulatory proteins, that control the Unc119- dependent myristoylated protein transport at the primary cilium, are also present at the photoreceptor synaptic ribbon complex by using high-resolution immunofluorescence and immunogold electron microscopy. We found Arl3 and Arl13b to be enriched at the synaptic ribbon whereas Rp2 was predominantly found on vesicles distributed within the entire terminal. These findings indicate that the synaptic ribbon could be involved in the discharge of Unc119-bound lipid-modified proteins. In agreement with this hypothesis, we found Nphp3 (Nephrocystin-3), a myristoylated, Unc119- dependent cargo protein enriched at the basal portion of the ribbon in close vicinity to the active zone. Mutations in Nphp3 are known to be associated with Senior–Løken Syndrome 3 (SLS3). Visual impairment and blindness in SLS3 might thus not only result from ciliary dysfunctions but also from malfunctions of the photoreceptor synapse

Optical Properties of Deep Ice at the South Pole - Absorption

We discuss recent measurements of the wavelength-dependent absorption coefficients in deep South Pole ice. The method uses transit time distributions of pulses from a variable-frequency laser sent between emitters and receivers embedded in the ice. At depths of 800 to 1000 m scattering is dominated by residual air bubbles, whereas absorption occurs both in ice itself and in insoluble impurities. The absorption coefficient increases approximately exponentially with wavelength in the measured interval 410 to 610 nm. At the shortest wavelength our value is about a factor 20 below previous values obtained for laboratory ice and lake ice; with increasing wavelength the discrepancy with previous measurements decreases. At around 415 to 500 nm the experimental uncertainties are small enough for us to resolve an extrinsic contribution to absorption in ice: submicron dust particles contribute by an amount that increases with depth and corresponds well with the expected increase seen near the Last Glacial Maximum in Vostok and Dome C ice cores. The laser pulse method allows remote mapping of gross structure in dust concentration as a function of depth in glacial ice.Comment: 26 pages, LaTex, Accepted for publication in Applied Optics. 9 figures, not included, available on request from [email protected]