On the perfect hexagonal packing of rods

In most cases the hexagonal packing of fibrous structures or rods extremizes the energy of interaction between strands. If the strands are not straight, then it is still possible to form a perfect hexatic bundle. Conditions under which the perfect hexagonal packing of curved tubular structures may exist are formulated. Particular attention is given to closed or cycled arrangements of the rods like in the DNA toroids and spools. The closure or return constraints of the bundle result in an allowable group of automorphisms of the cross-sectional hexagonal lattice. The structure of this group is explored. Examples of open helical-like and closed toroidal-like bundles are presented. An expression for the elastic energy of a perfectly packed bundle of thin elastic rods is derived. The energy accounts for both the bending and torsional stiffnesses of the rods. It is shown that equilibria of the bundle correspond to solutions of a variational problem formulated for the curve representing the axis of the bundle. The functional involves a function of the squared curvature under the constraints on the total torsion and the length. The Euler?Lagrange equations are obtained in terms of curvature and torsion and due to the existence of the first integrals the problem is reduced to the quadrature. The three-dimensional shape of the bundle may be readily reconstructed by integration of the Ilyukhin-type equations in special cylindrical coordinates. The results are of universal nature and are applicable to various fibrous structures, in particular, to intramolecular liquid crystals formed by DNA condensed in toroids or packed inside the viral capsids

Geometry and equilibria of parallel bundles of elastic rods

Geometrical conditions of existence of curved bundles of hexagonally packed rods are presented.Closure of the bundle results in a group of automorphisms of the cross-sectional lattice. The elastic energy accountsfor bending and torsion of the rods. Equilibria of the bundle correspond to solutions of a variational problemformulated for the axis of the bundle. The Euler-Lagrange equations are obtained in terms of curvature andtorsion and the problem is reduced to the quadrature. The Ilyukhin-type equations describe the shape of thebundle in special cylindrical coordinates. The results are of universal nature and are applicable to various fibrousstructures, including DNA and nanotubes

Numerical modelling of the quantum-tail effect on fusion rates at low energy

Results of numerical simulations of fusion rate d(d,p)t, for low-energy deuteron beam, colliding with deuterated metallic matrix (Raiola et al. Phys. Lett.B 547 (2002) 193 and Eur. Phys J. A 13 (2002) 377) confirm analytical estimate given in Coraddu et al. nucl-th/0401043, taking into account quantum tails in the momentum distribution function of target particles, and predict an enhanced astrophysical factor in the 1 keV region in qualitative agreement with experiments.Comment: 6 pages, without figure

A formula for the minimal coordination number of a parallel bundle

An exact formula for the minimal coordination numbers of the parallel packed bundle of rods is presented based on an optimal thickening scenario. Hexagonal and square lattices are considered

Writhe formulas and antipodal points in plectonemic DNA configurations

The linking and writhing numbers are key quantities when characterizing the structure of a piece of supercoiled DNA. Defined as double integrals over the shape of the double-helix, these numbers are not always straightforward to compute, though a simplified formula exists. We examine the range of applicability of this widely-used simplified formula, and show that it cannot be employed for plectonemic DNA. We show that inapplicability is due to a hypothesis of Fuller theorem that is not met. The hypothesis seems to have been overlooked in many works

Phase Space Cell in Nonextensive Classical Systems

We calculate the phase space volume $\Omega$ occupied by a nonextensive system of $N$ classical particles described by an equilibrium (or steady-state, or long-term stationary state of a nonequilibrium system) distribution function, which slightly deviates from Maxwell-Boltzmann (MB) distribution in the high energy tail. We explicitly require that the number of accessible microstates does not change respect to the extensive MB case. We also derive, within a classical scheme, an analytical expression of the elementary cell that can be seen as a macrocell, different from the third power of Planck constant. Thermodynamic quantities like entropy, chemical potential and free energy of a classical ideal gas, depending on elementary cell, are evaluated. Considering the fractional deviation from MB distribution we can deduce a physical meaning of the nonextensive parameter $q$ of the Tsallis nonextensive thermostatistics in terms of particle correlation functions (valid at least in the case, discussed in this work, of small deviations from MB standard case). pacs: 05.20.-y, 05.70.-a keywords: Classical Statistical Mechanics, ThermodynamicsComment: To appear on Entrop

Equilibrium Shapes with Stress Localisation for Inextensible Elastic Mobius and Other Strips

We formulate the problem of finding equilibrium shapes of a thin inextensible elastic strip, developing further our previous work on the Möbius strip. By using the isometric nature of the deformation we reduce the variational problem to a second-order one-dimensional problem posed on the centreline of the strip. We derive Euler–Lagrange equations for this problem in Euler–Poincaré form and formulate boundary-value problems for closed symmetric one- and two-sided strips. Numerical solutions for the Möbius strip show a singular point of stress localisation on the edge of the strip, a generic response of inextensible elastic sheets under torsional strain. By cutting and pasting operations on the Möbius strip solution, followed by parameter continuation, we construct equilibrium solutions for strips with different linking numbers and with multiple points of stress localisation. Solutions reveal how strips fold into planar or self-contacting shapes as the length-to-width ratio of the strip is decreased. Our results may be relevant for curvature effects on physical properties of extremely thin two-dimensional structures as for instance produced in nanostructured origami

Characterisation of cylindrical curves

We employ moving frames along pairs of curves at constant separation to derive various conditions for a curve to belong to the surface of a circular cylinder

Old chinese and friends: new approaches to historical linguistics of the Sino-Tibetan area

List J-M, Starostin G, Yunfan L. “Old Chinese and Friends”: new approaches to historical linguistics of the Sino-Tibetan area. Journal of Language Relationship. 2019;17(1-2):1-6