Text Based Analysis in the Undergraduate Classroom

This project compromises of both a written and technical portion. I have created an interactive web source for teaches in the undergraduate literature classroom to encourage a dynamic experience with literary text in order to promote active engagement in literature for students at any level of technological experience. Students or teachers are able to input outside texts that utilize graphs, charts, and interactive web tools in order to promote learning skills transferable to both academic and non-academic career paths. By utilizing “The Story of an Hour”, I explore the uses of this software in order to demonstrate the potential of the digital humanities to fortify students to be active in the creation of their work and education and by extension, their future careers within and outside academia

Hydrodynamic irreversibility of non-Brownian suspensions in highly confined duct flow

A.H. acknowledges support from the US Department of Energy, Advanced Scientific Computing Research programme, under the Scalable, Efficient and Accelerated Causal Reasoning Operators, Graphs and Spikes for Earth and Embedded Systems (SEA-CROGS) project, FWP 80278. Pacific Northwest National Laboratory (PNNL) is a multi-programme national laboratory operated for the US Department of Energy by the Battelle Memorial Institute under contract no. DE-AC05-76RL01830. F.V. acknowledges funding from the University of Granada through the Brown/CASA-UGR Research Collaboration Fund and MICINN PID2019-104883GB-I00 project (Spain).Supplementary movies are available at https://doi.org/10.1017/jfm.2023.793The irreversible behaviour of a highly confined non-Brownian suspension of spherical particles at low Reynolds number in a Newtonian fluid is studied experimentally and numerically. In the experiment, the suspension is confined in a thin rectangular channel that prevents complete particle overlap in the narrow dimension and is subjected to an oscillatory pressure-driven flow. In the small cross-sectional dimension, particles rapidly separate to the walls, whereas in the large dimension, features reminiscent of shear-induced migration in bulk suspensions are recovered. Furthermore, as a consequence of the channel geometry and the development and application of a single-camera particle tracking method, three-dimensional particle trajectories are obtained that allow us to directly associate relative particle proximity with the observed migration. Companion simulations of a steadily flowing suspension highly confined between parallel plates are conducted using the force coupling method, which also show rapid migration to the walls as well as other salient features observed in the experiment. While we consider relatively low volume fractions compared to most prior work in the area, we nevertheless observe significant and rapid migration, which we attribute to the high degree of confinement.US Department of Energy: FWP 80278, DE-AC05-76RL01830University of GranadaMICINN PID2019-104883GB-I00 project (Spain

2000-2001 A Little Jazz - Trio Con Brio

https://spiral.lynn.edu/conservatory_otherseasonalconcerts/1101/thumbnail.jp

Unified developmental model of maps, complex cells and surround modulation in the primary visual cortex

For human and animal vision, the perception of local visual features can depend on the spatial arrangement of the surrounding visual stimuli. In the earliest stages of visual processing this phenomenon is called surround modulation, where the response of visually selective neurons is influenced by the response of neighboring neurons. Surround modulation has been implicated in numerous important perceptual phenomena, such as contour integration and figure-ground segregation. In cats, one of the major potential neural substrates for surround modulation are lateral connections between cortical neurons in layer 2/3, which typically contains ”complex” cells that appear to combine responses from ”simple” cells in layer 4C. Interestingly, these lateral connections have also been implicated in the development of functional maps in primary visual cortex, such as smooth, well-organized maps for the preference of oriented lines. Together, this evidence suggests a common underlying substrate the lateral interactions in layer 2/3—as the driving force behind development of orientation maps for both simple and complex cells, and at the same time expression of surround modulation in adult animals. However, previously these phenomena have been studied largely in isolation, and we are not aware of a computational model that can account for all of them simultaneously and show how they are related. In this thesis we resolve this problem by building a single, unified computational model that can explain the development of orientation maps, the development of simple and complex cells, and surround modulation. First we build a simple, single-layer model of orientation map development based on ALISSOM, which has more realistic single cell properties (such as contrast gain control and contrast invariant orientation tuning) than its predecessor. Then we extend this model by adding layer 2/3, and show how the model can explain development of orientation maps of both simple and complex cells. As the last step towards a developmental model of surround modulation, we replace Mexican-hat-like lateral connectivity in layer 2/3 of the model with a more realistic configuration based on long-range excitation and short-range inhibitory cells, extending a simpler model by Judith Law. The resulting unified model of V1 explains how orientation maps of simple and complex cells can develop, while individual neurons in the developed model express realistic orientation tuning and various surround modulation properties. In doing so, we not only offer a consistent explanation behind all these phenomena, but also create a very rich model of V1 in which the interactions between various V1 properties can be studied. The model allows us to formulate several novel predictions that relate the variation of single cell properties to their location in the orientation preference maps in V1, and we show how these predictions can be tested experimentally. Overall, this model represents a synthesis of a wide body of experimental evidence, forming a compact hypothesis for much of the development and behavior of neurons in the visual cortex

2001-2002 Trio Con Brio

https://spiral.lynn.edu/conservatory_otherseasonalconcerts/1094/thumbnail.jp

Influence of Surface Retarders on Texture Profile and Durability of Upper Layer of Exposed Aggregate Concrete Pavement

Exposed aggregate concrete (EAC) pavement technology is used in Poland for construction of major highways and expressways. When properly executed, it is an efficient technique to provide desired friction for skid resistance without compromising the noise limitations. Concrete mix uniformity, proper dosing of retarding agent and optimal time to brush with a mechanical broom are supposed to have a major impact on the properties of the upper pavement layer. An experimental investigation was performed on exposed aggregate concrete specimens manufactured in the laboratory in a way to simulate the industrial production of two-layer concrete slab with exposed aggregate. The texture depth was determined using a laser profiler. The compressive strength of concrete, the water absorption rate, and permeability of chloride ions through concrete were also determined. The freeze-thaw resistance and surface scaling resistance were tested and analyzed with respect to air void characteristics. Results revealed an increase in surface scaling for EAC slabs with higher w/c ratio and slabs simulating local bleeding. The most efficient method to determine indirectly the durability of EAC slabs was the set of permeability tests comprised of measurements of chloride migration and rate of water absorption. The change of macrotexture depth with increase of w/c ratio and retarding admixture type was found

Water Entry of a Simple Harmonic Oscillator

When a blunt body impacts an air-water interface, large hydrodynamic forces often arise, a phenomenon many of us have unfortunately experienced in a failed dive or "belly flop." Beyond assessing risk to biological divers, an understanding and methods for remediation of such slamming forces are critical to the design of numerous engineered naval and aerospace structures. Herein we systematically investigate the role of impactor elasticity on the resultant structural loads in perhaps the simplest possible scenario: the water entry of a simple harmonic oscillator. Contrary to conventional intuition, we find that "softening" the impactor does not always reduce the peak impact force, but may also increase the force as compared to a fully rigid counterpart. Through our combined experimental and theoretical investigation, we demonstrate that the transition from force reduction to force amplification is delineated by a critical "hydroelastic" factor that relates the hydrodynamic and elastic timescales of the problem

Within-host dynamics of the emergence of tomato yellow leaf curl virus recombinants

Tomato yellow leaf curl virus (TYLCV) is a highly damaging begomovirus native to the Middle East. TYLCV has recently spread worldwide, recombining with other begomoviruses. Recent analysis of mixed infections between TYLCV and Tomato leaf curl Comoros begomovirus (ToLCKMV) has shown that, although natural selection preserves certain co-evolved intra-genomic interactions, numerous and diverse recombinants are produced at 120 days post-inoculation (dpi), and recombinant populations from different tomato plants are very divergent. Here, we investigate the population dynamics that lead to such patterns in tomato plants co-infected with TYLCV and ToLCKMV either by agro-inoculation or using the natural whitefly vector Bemisia tabaci . We monitored the frequency of parental and recombinant genotypes independently in 35 plants between 18 and 330 dpi and identified 177 recombinants isolated at different times. Recombinants were detected from 18 dpi and their frequency increased over time to reach about 50% at 150 dpi regardless of the inoculation method. The distribution of breakpoints detected on 96 fully sequenced recombinants was consistent with a continuous generation of new recombinants as well as random and deterministic effects in their maintenance. A severe population bottleneck of around 10 genomes was estimated during early systemic infection-a phenomenon that could account partially for the heterogeneity in recombinant patterns observed among plants. The detection of the same recombinant genome in six of the thirteen plants analysed beyond 30 dpi supported the influence of selection on observed recombination patterns. Moreover, a highly virulent recombinant genotype dominating virus populations within one plant has, apparently, the potential to be maintained in the natural population according to its infectivity, within-host accumulation, and transmission efficiency - all of which were similar or intermediate to those of the parent genotypes. Our results anticipate the outcomes of natural encounters between TYLCV and ToLCKMV