33 research outputs found

    Application of hydropedological insights in hydrological modelling of the Stevenson-Hamilton Research Supersite, Kruger National Park, South Africa

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    Soil information is increasingly sought after for hydrological modelling, as the importance of soil in the hydrological cycle is understood better. In this paper the output of a digital soil mapping exercise was used as the soil input into a distributed hydrological model (ACRU) for a test site within the Stevenson-Hamilton Research Supersite, Kruger National Park (South Africa). The aim was to determine the effect of parameterising a hydrological model with increased levels of soil information, at different scales. To accommodate this aim, ACRU was run in 3 different modes, each with increasing levels of input, on 3 catchments, including a 1st, 2nd and 3rd order catchment. The outputs evaluated included both streamflow and soil water content at selected soil profiles. Simulation accuracy increased with higher levels of soil input, as well as with increasing catchment size. The improved accuracy with increased soil input underscores the value of detailed soil information in modelling, while the improved results with increased catchment size show that the optimal scale for including soil information has not yet been reached.Keywords: ACRU; digital soil mapping; hillslope hydrology; hydropedology; Kruger National Par

    Critical Essay: Organizational cognitive neuroscience drives theoretical progress, or: The curious case of the straw man murder:organizational cognitive neuroscience drives theoretical progress, or: The curious case of the straw man murder

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    In this critical essay, we respond to Lindebaum’s (2016) argument that neuroscientific methodologies and data have been accepted prematurely in proposing novel management theory. We acknowledge that building new management theories requires firm foundations. We also find his distinction between demand and supply side forces helpful as an analytical framework identifying the momentum for the contemporary production of management theory. Nevertheless, some of the arguments Lindebaum (2016) puts forward, on closer inspection, can be contested, especially those related to the supply side of organizational cognitive neuroscience (OCN) research: fMRI data, motherhood statements and ethical concerns. We put forward a more positive case for OCN methodologies and data, as well as clarifying exactly what OCN really means, and its consequences for the development of strong management theory

    Evidence of Distinct Tumour-Propagating Cell Populations with Different Properties in Primary Human Hepatocellular Carcinoma

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    Increasing evidence that a number of malignancies are characterised by tumour cell heterogeneity has recently been published, but there is still a lack of data concerning liver cancers. The aim of this study was to investigate and characterise tumour-propagating cell (TPC) compartments within human hepatocellular carcinoma (HCC).After long-term culture, we identified three morphologically different tumour cell populations in a single HCC specimen, and extensively characterised them by means of flow cytometry, fluorescence microscopy, karyotyping and microarray analyses, single cell cloning, and xenotransplantation in NOD/SCID/IL2Rγ/⁻ mice.The primary cell populations (hcc-1, -2 and -3) and two clones generated by means of limiting dilutions from hcc-1 (clone-1/7 and -1/8) differently expressed a number of tumour-associated stem cell markers, including EpCAM, CD49f, CD44, CD133, CD56, Thy-1, ALDH and CK19, and also showed different doubling times, drug resistance and tumorigenic potential. Moreover, we found that ALDH expression, in combination with CD44 or Thy-1 negativity or CD56 positivity identified subpopulations with a higher clonogenic potential within hcc-1, hcc-2 and hcc-3 primary cell populations, respectively. Karyotyping revealed the clonal evolution of the cell populations and clones within the primary tumour. Importantly, the primary tumour cell population with the greatest tumorigenic potential and drug resistance showed more chromosomal alterations than the others and contained clones with epithelial and mesenchymal features.Individual HCCs can harbor different self-renewing tumorigenic cell types expressing a variety of morphological and phenotypical markers, karyotypic evolution and different gene expression profiles. This suggests that the models of hepatic carcinogenesis should take into account TPC heterogeneity due to intratumour clonal evolution

    Pretubulysin: From Hypothetical Biosynthetic Intermediate to Potential Lead in Tumor Therapy

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    Pretubulysin is a natural product that is found in strains of myxobacteria in only minute amounts. It represents the first enzyme-free intermediate in the biosynthesis of tubulysins and undergoes post-assembly acylation and oxidation reactions. Pretubulysin inhibits the growth of cultured mammalian cells, as do tubulysins, which are already in advanced preclinical development as anticancer and antiangiogenic agents. The mechanism of action of this highly potent compound class involves the depolymerization of microtubules, thereby inducing mitotic arrest. Supply issues with naturally occurring derivatives can now be circumvented by the total synthesis of pretubulysin, which, in contrast to tubulysin, is synthetically accessible in gram-scale quantities. We show that the simplified precursor is nearly equally potent to the parent compound. Pretubulysin induces apoptosis and inhibits cancer cell migration and tubulin assembly in vitro. Consequently, pretubulysin appears to be an ideal candidate for future development in preclinical trials and is a very promising early lead structure in cancer therapy

    What scans we will read: imaging instrumentation trends in clinical oncology

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    Oncological diseases account for a significant portion of the burden on public healthcare systems with associated costs driven primarily by complex and long-lasting therapies. Through the visualization of patient-specific morphology and functional-molecular pathways, cancerous tissue can be detected and characterized non- invasively, so as to provide referring oncologists with essential information to support therapy management decisions. Following the onset of stand-alone anatomical and functional imaging, we witness a push towards integrating molecular image information through various methods, including anato-metabolic imaging (e.g., PET/ CT), advanced MRI, optical or ultrasound imaging. This perspective paper highlights a number of key technological and methodological advances in imaging instrumentation related to anatomical, functional, molecular medicine and hybrid imaging, that is understood as the hardware-based combination of complementary anatomical and molecular imaging. These include novel detector technologies for ionizing radiation used in CT and nuclear medicine imaging, and novel system developments in MRI and optical as well as opto-acoustic imaging. We will also highlight new data processing methods for improved non-invasive tissue characterization. Following a general introduction to the role of imaging in oncology patient management we introduce imaging methods with well-defined clinical applications and potential for clinical translation. For each modality, we report first on the status quo and point to perceived technological and methodological advances in a subsequent status go section. Considering the breadth and dynamics of these developments, this perspective ends with a critical reflection on where the authors, with the majority of them being imaging experts with a background in physics and engineering, believe imaging methods will be in a few years from now. Overall, methodological and technological medical imaging advances are geared towards increased image contrast, the derivation of reproducible quantitative parameters, an increase in volume sensitivity and a reduction in overall examination time. To ensure full translation to the clinic, this progress in technologies and instrumentation is complemented by progress in relevant acquisition and image-processing protocols and improved data analysis. To this end, we should accept diagnostic images as “data”, and – through the wider adoption of advanced analysis, including machine learning approaches and a “big data” concept – move to the next stage of non-invasive tumor phenotyping. The scans we will be reading in 10 years from now will likely be composed of highly diverse multi- dimensional data from multiple sources, which mandate the use of advanced and interactive visualization and analysis platforms powered by Artificial Intelligence (AI) for real-time data handling by cross-specialty clinical experts with a domain knowledge that will need to go beyond that of plain imaging

    South Africa needs a hydrological soil map: a case study from the upper uMngeni catchment

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    Accurate hydrological modelling to evaluate the impacts of climate and land use change on water resources is pivotal to sustainable management. Soil information is an important input in hydrological models but is often not available at adequate scale with appropriate attributes for direct parameterisation of the models. In this study, conducted in three quaternary catchments in the midlands of KwaZulu-Natal, three different soil information sets were used to configure SWAT+, a revised version of the Soil and Water Assessment Tool (SWAT). The datasets were: (i) the Land Type database (currently the only soil dataset covering the whole of South Africa), (ii) disaggregation of the Land Type database using digital soil mapping techniques (called DSMART), and (iii) a dataset where DSMART were complemented by field observations and interpretations of the hydropedological behaviour of the soils (DSMART+). Simulated streamflow was compared with measured streamflow at three weirs with long-term measurements, and the impact of the soil datasets on water balance simulations was evaluated. In general, the simulations were acceptable when compared to other studies, but could be improved through calibration and including small reservoirs in the model. The DSMART+ dataset yielded more accurate simulations of streamflow in all three catchments with Nash-Sutcliffe efficiencies increasing by between 9% and 67% when compared to the Land Type dataset. The value of the improved soil maps is, however, highlighted through the enhanced spatial detail of streamflow generation mechanisms and water balance components. The internal catchment processes are represented more accurately, and we argue that South Africa needs a detailed hydrological soil map for effective water resource management
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