355 research outputs found

    Molecular-Level Understanding of the Ro-vibrational Spectra of N2_2O in Gaseous, Supercritical and Liquid SF6_6 and Xe

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    The transition between the gas-, supercritical-, and liquid-phase behaviour is a fascinating topic which still lacks molecular-level understanding. Recent ultrafast two-dimensional infrared spectroscopy experiments suggested that the vibrational spectroscopy of N2_2O embedded in xenon and SF6_6 as solvents provides an avenue to characterize the transitions between different phases as the concentration (or density) of the solvent increases. The present work demonstrates that classical molecular dynamics simulations together with accurate interaction potentials allows to (semi-)quantitatively describe the transition in rotational vibrational infrared spectra from the P-/R-branch lineshape for the stretch vibrations of N2_2O at low solvent densities to the Q-branch-like lineshapes at high densities. The results are interpreted within the classical theory of rigid-body rotation in more/less constraining environments at high/low solvent densities or based on phenomenological models for the orientational relaxation of rotational motion. It is concluded that classical MD simulations provide a powerful approach to characterize and interpret the ultrafast motion of solutes in low to high density solvents at a molecular level

    Femtosecond photonic viral inactivation probed using solid-state nanopores

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    We report on detection of virus inactivation using femtosecond laser radiation by measuring the conductance of a solid state nanopore designed for detecting single particles. Conventional methods of assaying for viral inactivation based on plaque forming assays require 24–48 h for bacterial growth. Nanopore conductance measurements provide information on morphological changes at a single virion level.We show that analysis of a time series of nanopore conductance can quantify the detection of inactivation, requiring only a few minutes from collection to analysis. Morphological changes were verified by dynamic light scattering. Statistical analysis maximizing the information entropy provides a measure of the log reduction value. This work provides a rapid method for assaying viral inactivation with femtosecond lasers using solid-state nanopores.First author draf

    Plasmon-enhanced Stimulated Raman Scattering Microscopy with Single-molecule Detection Sensitivity

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    Stimulated Raman scattering (SRS) microscopy allows for high-speed label-free chemical imaging of biomedical systems. The imaging sensitivity of SRS microscopy is limited to ~10 mM for endogenous biomolecules. Electronic pre-resonant SRS allows detection of sub-micromolar chromophores. However, label-free SRS detection of single biomolecules having extremely small Raman cross-sections (~10-30 cm2 sr-1) remains unreachable. Here, we demonstrate plasmon-enhanced stimulated Raman scattering (PESRS) microscopy with single-molecule detection sensitivity. Incorporating pico-Joule laser excitation, background subtraction, and a denoising algorithm, we obtained robust single-pixel SRS spectra exhibiting the statistics of single-molecule events. Single-molecule detection was verified by using two isotopologues of adenine. We further demonstrated the capability of applying PESRS for biological applications and utilized PESRS to map adenine released from bacteria due to starvation stress. PESRS microscopy holds the promise for ultrasensitive detection of molecular events in chemical and biomedical systems

    A Generating Function for all Semi-Magic Squares and the Volume of the Birkhoff Polytope

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    We present a multivariate generating function for all n x n nonnegative integral matrices with all row and column sums equal to a positive integer t, the so called semi-magic squares. As a consequence we obtain formulas for all coefficients of the Ehrhart polynomial of the polytope B_n of n x n doubly-stochastic matrices, also known as the Birkhoff polytope. In particular we derive formulas for the volumes of B_n and any of its faces.Comment: 24 pages, 1 figure. To appear in Journal of Algebraic Combinatoric

    Repetition Count Concurrent Validity of Various Garmin Wrist Watches During Light Circuit Resistance Training

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    Wearable technology and strength training with free weights are two of the top 5 fitness trends worldwide. However, minimal physiological research has been conducted on the two together and none have measured the accuracy of devices measuring repetition counts across exercises. PURPOSE: The purpose of this study was to determine the concurrent validity of four wrist-worn Garmin devices, Instinct (x2), Fenix 6 Pro, and Vivoactive 3, to record repetition counts while performing 4 different exercises during circuit resistance training. METHODS: Twenty participants (n=10 female, n=10 male; age: 23.2 ± 7.7 years) completed this study. Participants completed 4 circuits of 4 exercises (front squat, reverse lunge, push-ups, and shoulder press) using dumbbells at a light intensity with 1 set of 10 repetitions per exercise and 30 seconds rest between exercises and 1-1.5 min rest between circuits. Mean absolute percent error (MAPE, ≀10%) and Lin’s Concordance Coefficient (CCC, ρ≄0.7) were used to validate the device’s repetitions counts in all exercises compared to the criterion reference manual count. Dependent T-tests determined differences (p≀0.05). RESULTS: No devices were considered valid (meeting both the threshold for MAPE and CCC) for measuring repetition counts during front squats (MAPE range: 3.0-18.5% and CCC range: 0.27-0.68, p value range: 0.00-0.94), reverse lunge (MAPE range: 44.5-67.0% and CCC range: 0.19-0.31, p value range: 0.00-0.28), push-ups (MAPE range: 12.5-67.5% and CCC range: 0.10-0.34, p value range: 0.07-0.83), and shoulder press (MAPE range: 18.0-51.0% and CCC range: 0.11-0.43, p value range: 0.00-0.79) exercises. CONCLUSION: The wearable wrist-worn devices were not considered accurate for repetition counts and thus manual counting should be utilized. People who strength train using free weights will need to wait for either improved repetition counting algorithms or increased sensitivity of devices before this measure can be obtained with confidence

    Femtosecond Photonic Viral Inactivation Probed Using Solid-State Nanopores

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    We report on the detection of inactivation of virus particles using femtosecond laser radiation by measuring the conductance of a solid state nanopore designed for detecting single virus particles. Conventional methods of assaying for viral inactivation based on plaque forming assays require 24-48 hours for bacterial growth. Nanopore conductance measurements provide information on morphological changes at a single virion level. We show that analysis of a time series of nanopore conductance can quantify the detection of inactivation, requiring only a few minutes from collection to analysis. Morphological changes were verified by Dynamic Light Scattering (DLS). Statistical analysis maximizing the information entropy provides a measure of the Log-reduction value. Taken together, our work provides a rapid method for assaying viral inactivation with femtosecond lasers using solid-state nanopores.Comment: 6 Figures with caption

    Geographic Variation in Salt Marsh Structure and Function for Nekton: a Guide to Finding Commonality Across Multiple Scales

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    Coastal salt marshes are distributed widely across the globe and are considered essential habitat for many fish and crustacean species. Yet, the literature on fishery support by salt marshes has largely been based on a few geographically distinct model systems, and as a result, inadequately captures the hierarchical nature of salt marsh pattern, process, and variation across space and time. A better understanding of geographic variation and drivers of commonalities and differences across salt marsh systems is essential to informing future management practices. Here, we address the key drivers of geographic variation in salt marshes: hydroperiod, seascape configuration, geomorphology, climatic region, sediment supply and riverine input, salinity, vegetation composition, and human activities. Future efforts to manage, conserve, and restore these habitats will require consideration of how environmental drivers within marshes affect the overall structure and subsequent function for fisheries species. We propose a future research agenda that provides both the consistent collection and reporting of sources of variation in small-scale studies and collaborative networks running parallel studies across large scales and geographically distinct locations to provide analogous information for data poor locations. These comparisons are needed to identify and prioritize restoration or conservation efforts, identify sources of variation among regions, and best manage fisheries and food resources across the globe

    Average Heart Rate and Energy Expenditure Validity of Garmin Vivoactive 3 and Fenix 6 Wrist Watches During Light Circuit Resistance Training

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    Our laboratory recently found wrist-worn wearable technology devices to be valid for measuring average heart rate (HR), but not valid for estimated energy expenditure (EE) compared to criterion devices, during steady state aerobic training (walking, running, biking). However, the validity of wrist-worn devices for HR and EE measures during resistance training is largely unknown. PURPOSE: The purpose of this study was to determine if two wrist-worn devices, Garmin Vivoactive 3 and Garmin Fenix 6 Pro, record valid measures of average HR and EE while performing circuit resistance training. METHODS: Twenty participants (n=10 female, n=10 male; age: 23.2 ± 7.7 years) completed this study. The Garmin Vivoactive 3 and Garmin Fenix 6 Pro were tested along with the Polar H10 chest strap and Cosmed K5 portable metabolic unit as the criterions for average HR and EE, respectively. Participants completed 4 circuits of 4 exercises (front squat, reverse lunge, push-ups, and shoulder press) using dumbbells at a light intensity with 1 set of 10 repetitions per exercise and 30 seconds rest between exercises and 1-1.5 min. rest between circuits. Mean absolute percent error (MAPE, ≀10%) and Lin’s Concordance (ρ≄0.7) were used to validate the device’s average HR (in bpm) and estimated EE (in kcals) compared to criterion reference devices. Dependent T-tests determined differences (p≀0.05). RESULTS: Average HR for Garmin Vivoactive 3 and Fenix 6 Pro were significantly different (p\u3c0.01) than the Polar H10 (115.0±23.9 and 124.5±15.4 vs 128.9±19.0 bpm, respectively), and were not considered valid (MAPE: 44.8% and 25.1%; Lin’s Concordance: 0.50 and 0.63, respectively). Estimated EE for Garmin Vivoactive 3 and Fenix 6 Pro were significantly different (p\u3c0.0001) than the Cosmed K5 (31.7±12.3 and 39.7±13.1 vs 20.3±5.5 kcals, respectively), and were not considered valid (MAPE: 309.7% and 322.1%; Lin’s Concordance: 0.04 and 0.15, respectively). CONCLUSION: Anyone involved in any resistance training aspect should be aware of the limitations of these wrist-worn devices in measuring average HR or EE

    Search for Low Scale Gravity Effects in e+e- Collisions at LEP

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    Recent theories propose that quantum gravity effects may be observable at LEP energies via gravitons that couple to Standard Model particles and propagate into extra spatial dimensions. The associated production of a graviton and a photon is searched for as well as the effects of virtual graviton exchange in the processes: e+e- -> gamma gamma, ZZ, WW, mu mu, tau tau, qq and ee No evidence for this new interaction is found in the data sample collected by the L3 detector at LEP at centre-of-mass energies up to 183 GeV. Limits close to 1 TeV on the scale of this new scenario of quantum gravity are set
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