Report on assessment and management advice for 2004 of the anchovy fishery in the Yellow Sea

The Bei Dou Fisheries Management Project 2001-2005; Institute of Marine Research, Bergen, April 24-30, 200

Report on assessment and management advice for 2004 of the anchovy fishery in the Yellow Sea

The Bei Dou Fisheries Management Project 2001-2005; Institute of Marine Research, Bergen, April 24-30, 200

Detection of copy number variations and their effects in Chinese bulls

BACKGROUND: Copy number variations (CNVs) are a main source of genomic structural variations underlying animal evolution and production traits. Here, with one pure-blooded Angus bull as reference, we describe a genome-wide analysis of CNVs based on comparative genomic hybridization arrays in 29 Chinese domesticated bulls and examined their effects on gene expression and cattle growth traits. RESULTS: We identified 486 copy number variable regions (CNVRs), covering 2.45% of the bovine genome, in 24 taurine (Bos taurus), together with 161 ones in 2 yaks (Bos grunniens) and 163 ones in 3 buffaloes (Bubalus bubalis). Totally, we discovered 605 integrated CNVRs, with more “loss” events than both “gain” and “both” ones, and clearly clustered them into three cattle groups. Interestingly, we confirmed their uneven distributions across chromosomes, and the differences of mitochondrion DNA copy number (gain: taurine, loss: yak & buffalo). Furthermore, we confirmed approximately 41.8% (253/605) and 70.6% (427/605) CNVRs span cattle genes and quantitative trait loci (QTLs), respectively. Finally, we confirmed 6 CNVRs in 9 chosen ones by using quantitative PCR, and further demonstrated that CNVR22 had significantly negative effects on expression of PLA2G2D gene, and both CNVR22 and CNVR310 were associated with body measurements in Chinese cattle, suggesting their key effects on gene expression and cattle traits. CONCLUSIONS: The results advanced our understanding of CNV as an important genomic structural variation in taurine, yak and buffalo. This study provides a highly valuable resource for Chinese cattle’s evolution and breeding researches. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-480) contains supplementary material, which is available to authorized users

Pollen-based biome reconstruction on the Qinghai-Tibetan Plateau during the past 15,000 years

Reconstruction of past vegetation change is critical for better understanding the potential impact of future global change on the fragile alpine ecosystems of the Qinghai-Tibetan Plateau (QTP). In this paper, pollen assemblages comprising 58 records from the QTP, spanning the past 15 kyrs, were collected to reconstruct biome compositions using a standard approach. Six forest biomes were identified mainly on the southeastern plateau, exhibiting a pattern of gradual expansion along the eastern margin during early to mid-Holocene times. The alpine meadow biome was separately identified based on an updated scheme, and showed notable westward expansions towards lower latitudes and higher altitudes during early Holocene times. Consistent patterns of migration could also be identified for the alpine steppe biome, which moved eastward during the late Holocene after 4 ka. As the dominant biome type, temperate steppe was distributed widely over the QTP with minor migration patterns, except for a progressive expansion to lower altitudes in the late Holocene times. The desert biome was inferred mainly as covering the northwestern plateau and the Qaidam Basin, in relatively restricted areas. The spatial distribution of the reconstructed biomes represent the large-scale vegetation gradient on the QTP. Monsoonal precipitation expressed predominant controls on the development of alpine ecosystems, while the variations in desert vegetation responded to regional moisture brought by the mid-latitude Westerlies. Temperature changes played relatively minor roles in the variations of alpine vegetation, but exerted more significant impacts on the forest biomes

Pollen-based mapping of Holocene vegetation on the Qinghai-Tibetan Plateau in response to climate change

Improved studies of past vegetation change are required to better understand the variation of alpine ecosystems on the Qinghai-Tibetan Plateau (QTP) in response to future climate change. Spatial and temporal variations of past vegetation can be traced by fossil pollen data mapping. In this paper, we synthesized 57 continuous pollen records on the QTP covering the past 15 kyr to depict large-scale vegetation change and its response to climate variations. In order to minimize potential chronological biases, age-depth models were revised using a state-of-the-art and consistent method for all the records. The spatial and temporal variation of major pollen taxa were examined based on interpolated pollen maps at 1000-year intervals. The arboreal pollen (AP, mainly of Pinus, Betula and Abies/Picea) content expressed significant climate signals over a broad spatial and temporal gradient. During the late glacial period, high proportions of AP widely occurred in regions that are presently unforested owing to the sparse local vegetation coverage. For the Holocene period, AP showed relatively high contributions in records from the southeastern margin of the QTP, with a decreasing gradient in abundance towards the northwest. The transportation of AP to unforested regions corresponds closely to the intensity of monsoon wind, which can be used to track the Holocene evolution of the summer monsoon. The dominant shrub and herbaceous taxa (including Artemisia, Chenopodiaceae, Cyperaceae, Poaceae and Ephedra) generally represent developments of local vegetation responding to climate variations. In addition, the persistent increase in Poaceae pollen during the mid to late Holocene correlates possibly to regional human activities. The inferred spatial and temporal patterns of major pollen types on the QTP provide significant knowledge about long-term vegetation change and its potential response to climate variations

Simultaneous detection of flare-associated kink oscillations and extreme-ultraviolet waves

Kink oscillations, which are frequently observed in coronal loops and prominences, are often accompanied by extreme-ultraviolet (EUV) waves. However, much more needs to be explored regarding the causal relationships between kink oscillations and EUV waves. In this article, we report the simultaneous detection of kink oscillations and EUV waves that are both associated with an X2.1 flare on 2023 March 03 (SOL2023-03-03T17:39). The kink oscillations, which are almost perpendicular to the axes of loop-like structures, are observed in three coronal loops and one prominence. One short loop shows in-phase oscillation within the same period of 5.2 minutes at three positions. This oscillation could be triggered by the pushing of an expanding loop and interpreted as the standing kink wave. Time lags are found between the kink oscillations of the short loop and two long loops, suggesting that the kink wave travels in different loops. The kink oscillations of one long loop and the prominence are possibly driven by the disturbance of the CME, and that of another long loop might be attributed to the interaction of the EUV wave. The onset time of the kink oscillation of the short loop is nearly same as the beginning of an EUV wave. This fact demonstrates that they are almost simultaneous. The EUV wave is most likely excited by the expanding loop structure and shows two components. The leading component is a fast coronal wave, and the trailing one could be due to the stretching magnetic field lines.Comment: accepted for publication in the Science China Technological Science

Highly thermostable mixed lanthanide organic frameworks with high quantum yield for warm white light-emitting diodes

A mixed lanthanide organic framework was prepared via hydrothermal methods using m-phthalic acid (m-H2BDC), 1,10-phenanthroline (1,10-Phen), and Ln3+ ions, formulated as [HNMe2][Eu0.095Tb1.905(m-BDC)3(phen)2] (ZTU-6). The structure and stability of ZTU-6 were characterised by X-ray diffraction (XRD) and thermogravimetric analysis (TGA), which revealed a three-dimensional pcu topology with high thermal stability. Fluorescence tests showed that ZTU-6 emitted orange light with a high quantum yield of 79.15%, and it can be effectively encapsulated in a light-emitting diode (LED) device emitting orange light. In addition, ZTU-6 was found to be compatible with BaMgAl10O17:Eu2+ (BAM) blue powder and [(Sr,Ba)2SiO4:Eu2+] silicate yellow and green powder to create a warm white LED with a high colour rendering index (CRI) of 93.4, a correlated colour temperature (CCT) of 3908 K, and CIE coordinates of (0.38, 036)

Quantitative woody cover reconstructions from eastern continental Asia of the last 22 kyr reveal strong regional peculiarities

We present a calibration-set based on modern pollen and satellite-based Advanced Very High Resolution Radiometer (AVHRR) observations of woody cover (including needleleaved, broadleaved and total tree cover) in eastern continental Asia, which shows good performance under cross-validation with the modern analogue technique (all the coefficients of determination between observed and predicted values are greater than 0.65). The calibration-set is used to reconstruct woody cover from a taxonomically harmonized and temporally standardized fossil pollen dataset (including 274 cores) with 500-year resolution over the last 22 kyr. The spatial range of forest has not noticeably changed in eastern continental Asia during the last 22 kyr, although woody cover has, especially at the margin of the eastern Tibetan Plateau and in the forest-steppe transition area of north-central China. Vegetation was sparse during the LGM in the present forested regions, but woody cover increased markedly at the beginning of the Bølling/Allerød period (B/A; ca. 14.5 ka bp) and again at the beginning of the Holocene (ca. 11.5 ka bp), and is related to the enhanced strength of the East Asian Summer Monsoon. Forest flourished in the mid-Holocene (ca. 8 ka bp) possibly due to favourable climatic conditions. In contrast, cover was stable in southern China (high cover) and arid central Asia (very low cover) throughout the investigated period. Forest cover increased in the north-eastern part of China during the Holocene. Comparisons of these regional pollen-based results with simulated forest cover from runs of a global climate model (for 9, 6 and 0 ka bp (ECHAM5/JSBACH ∼1.125° spatial resolution)) reveal many similarities in temporal change. The Holocene woody cover history of eastern continental Asia is different from that of other regions, likely controlled by different climatic variables, i.e. moisture in eastern continental Asia; temperature in northern Eurasia and North America

Spring Flood Forecasting Based on the WRF-TSRM Mode

The snowmelt process is becoming more complex in the context of global warming, and the current existing studies are not effective in using the short-term prediction model to drive the distributed hydrological model to predict snowmelt floods. In this study, we selected the Juntanghu Watershed in Hutubi County of China on the north slope of the Tianshan Mountains as the study area with which to verify the snowmelt flood prediction accuracy of the coupling model. The weather research and forecasting (WRF) model was used to drive a double-layer distributed snowmelt runoff model called the Tianshan Snowmelt Runoff Model (TSRM), which is based on multi-year field snowmelt observations. Moreover, the data from NASA’s moderate resolution imaging spectroradiometer (MODIS) was employed to validate the snow water equivalent during the snow-melting period. Results show that, based on the analysis of the flow lines in 2009 and 2010, the WRF-driven TSRM has an overall 80% of qualification ratios (QRs), with determination coefficients of 0.85 and 0.82 for the two years, respectively, which demonstrates the high accuracy of the model. However, due to the influence of the ablation of frozen soils, the forecasted flood peak is overestimated. This problem can be solved by an improvement to the modeled frozen soil layers. The conclusion reached in this study suggests that the WRF-driven TSRM can be used to forecast short-term snowmelt floods on the north slope of the Tianshan Mountains, which can effectively improve the local capacity for the forecasting and early warning of snowmelt floods