200 research outputs found
A comparative evaluation of rehydration and cuploading sample application for modified twodimensional gel electrophoresis of human serum proteins using immobilized pH gradient
Proteomics is a powerful technique to study proteomes extracted from biological sources. Proteome analysis classically is based on two-dimensional electrophoresis (2D-E) for protein separation and mass spectrometry (MS) for the protein identification. The serum protein analysis is a useful diagnosis that can be used as an indicator of the physiological or clinical status of a patient. One of the central and critical steps is sample application, therefore this method should be considered and optimized for 2-DE with immobilized pH gradient. The aim of this study was focused on comparative application of ingel (rehydration loading) and in-cup (cup loading) sample application for 2-DE of human serum analysis. The results indicate that the number of spots detected with the rehydration loading was higher than the number obtained by cup-loading sample application. Also in this work, in order to obtain the best result with high resolution, a 2-DE procedure was optimized.Key words: Proteomics, 2D-E, proteome, sample application
Performance evaluation and design for variable threshold alarm systems through semi-Markov process
YesIn large industrial systems, alarm management is one of the most important issues to improve the safety and efficiency of systems in practice. Operators of such systems often have to deal with a numerous number of simultaneous alarms. Different kinds of thresholding or filtration are applied to decrease alarm nuisance and improve performance indices, such as Averaged Alarm Delay (ADD), Missed Alarm and False Alarm Rates (MAR and FAR). Among threshold-based approaches, variable thresholding methods are well-known for reducing the alarm nuisance and improving the performance of the alarm system. However, the literature suffers from the lack of an appropriate method to assess performance parameters of Variable Threshold Alarm Systems (VTASs). This study introduces two types of variable thresholding and proposes a novel approach for performance assessment of VTASs using Priority-AND gate and semi-Markov process. Application of semi-Markov process allows the proposed approach to consider industrial measurements with non-Gaussian distributions. In addition, the paper provides a genetic algorithm based optimized design process for optimal parameter setting to improve performance indices. The effectiveness of the proposed approach is illustrated via three numerical examples and through a comparison with previous studies.Noavaran Electronic Adar Sameh company [Grant NO: IRAM17S1]
Reversible Pulmonary Hypertension and Isolated Right-sided Heart Failure Associated with Hyperthyroidism
Hyperthyroidism may present with signs and symptoms related to dysfunction of a variety of organs. Cardiovascular pathology in hyperthyroidism is common. A few case reports describe isolated right heart failure, tricuspid regurgitation, and pulmonary hypertension as the prominent cardiovascular manifestations of hyperthyroidism. Although most textbooks do not mention hyperthyroidism as a cause of pulmonary hypertension and isolated right heart failure, the literature suggests that some hyperthyroid patients may develop reversible pulmonary hypertension and isolated right heart failure. We report a case of hyperthyroidism presenting with signs and symptoms of isolated right heart failure, tricuspid regurgitation, and pulmonary hypertension, which resolved with treatment of hyperthyroidism
p53 Transactivation and the Impact of Mutations, Cofactors and Small Molecules Using a Simplified Yeast-Based Screening System
The p53 tumor suppressor, which is altered in most cancers, is a sequence-specific transcription factor that is able to modulate the expression of many target genes and influence a variety of cellular pathways. Inactivation of the p53 pathway in cancer frequently occurs through the expression of mutant p53 protein. In tumors that retain wild type p53, the pathway can be altered by upstream modulators, particularly the p53 negative regulators MDM2 and MDM4. promoter, ii) single copy, chromosomally located p53-responsive and control luminescence reporters, iii) enhanced chemical uptake using modified ABC-transporters, iv) small-volume formats for treatment and dual-luciferase assays, and v) opportunities to co-express p53 with other cofactor proteins. This robust system can distinguish different levels of expression of WT and mutant p53 as well as interactions with MDM2 or 53BP1.We found that the small molecules Nutlin and RITA could both relieve the MDM2-dependent inhibition of WT p53 transactivation function, while only RITA could impact p53/53BP1 functional interactions. PRIMA-1 was ineffective in modifying the transactivation capacity of WT p53 and missense p53 mutations. This dual-luciferase assay can, therefore, provide a high-throughput assessment tool for investigating a matrix of factors that can influence the p53 network, including the effectiveness of newly developed small molecules, on WT and tumor-associated p53 mutants as well as interacting proteins
A systematic review evaluating the psychometric properties of measures of social inclusion
Introduction: Improving social inclusion opportunities for population health has been identified as a priority area for international policy. There is a need to comprehensively examine and evaluate the quality of psychometric properties of measures of social inclusion that are used to guide social policy and outcomes. Objective: To conduct a systematic review of the literature on all current measures of social inclusion for any population group, to evaluate the quality of the psychometric properties of identified measures, and to evaluate if they capture the construct of social inclusion. Methods: A systematic search was performed using five electronic databases: CINAHL, PsycINFO, Embase, ERIC and Pubmed and grey literature were sourced to identify measures of social inclusion. The psychometric properties of the social inclusion measures were evaluated against the COSMIN taxonomy of measurement properties using pre-set psychometric criteria. Results: Of the 109 measures identified, twenty-five measures, involving twenty-five studies and one manual met the inclusion criteria. The overall quality of the reviewed measures was variable, with the Social and Community Opportunities Profile-Short, Social Connectedness Scale and the Social Inclusion Scale demonstrating the strongest evidence for sound psychometric quality. The most common domain included in the measures was connectedness (21), followed by participation (19); the domain of citizenship was covered by the least number of measures (10). No single instrument measured all aspects within the three domains of social inclusion. Of the measures with sound psychometric evidence, the Social and Community Opportunities Profile-Short captured the construct of social inclusion best. Conclusions: The overall quality of the psychometric properties demonstrate that the current suite of available instruments for the measurement of social inclusion are promising but need further refinement. There is a need for a universal working definition of social inclusion as an overarching construct for ongoing research in the area of the psychometric properties of social inclusion instruments
Standardization of insurance operations and risk assessment and edition of manual for recognition of management and natural disaster risks in shrimp farms, and feasibility study of insuring shrimp hatcheries
According to achieve sustainable production in shrimp farming industry, it is necessary to provide the relief of producers through insurance. Aquaculture faces various environmental conditions such as unpredictable climate changes, epidemic diseases, harsh water factors, that may affect the production cycle, and impact on producer's life. In this research, the effects of various factors on production of cultured shrimp have been studied. The project conducted through completion of questionaries by random selected of small scale farms, and all large farms which engaged in production in that years. In order to increase the accuracy of responses, special questionnaires provided to fill in by expertise experts. All data explained the share of management and natural factors on production process
Improving Estimations of Spatial Distribution of Soil Respiration Using the Bayesian Maximum Entropy Algorithm and Soil Temperature as Auxiliary Data
This study was supported by the NSF China Programs (Grant No. 31300539 and 31570629) and the Public Welfare Technology Application Research Program of Zhejiang province (Grant No. 2015C31004).Soil respiration inherently shows strong spatial variability. It is difficult to obtain an accurate characterization of soil respiration with an insufficient number of monitoring points. However, it is expensive and cumbersome to deploy many sensors. To solve this problem, we proposed employing the Bayesian Maximum Entropy (BME) algorithm, using soil temperature as auxiliary information, to study the spatial distribution of soil respiration. The BME algorithm used the soft data (auxiliary information) effectively to improve the estimation accuracy of the spatiotemporal distribution of soil respiration. Based on the functional relationship between soil temperature and soil respiration, the BME algorithm satisfactorily integrated soil temperature data into said spatial distribution. As a means of comparison, we also applied the Ordinary Kriging (OK) and Co-Kriging (Co-OK) methods. The results indicated that the root mean squared errors (RMSEs) and absolute values of bias for both Day 1 and Day 2 were the lowest for the BME method, thus demonstrating its higher estimation accuracy. Further, we compared the performance of the BME algorithm coupled with auxiliary information, namely soil temperature data, and the OK method without auxiliary information in the same study area for 9, 21, and 37 sampled points. The results showed that the RMSEs for the BME algorithm (0.972 and 1.193) were less than those for the OK method (1.146 and 1.539) when the number of sampled points was 9 and 37, respectively. This indicates that the former method using auxiliary information could reduce the required number of sampling points for studying spatial distribution of soil respiration. Thus, the BME algorithm, coupled with soil temperature data, can not only improve the accuracy of soil respiration spatial interpolation but can also reduce the number of sampling points.Yeshttp://www.plosone.org/static/editorial#pee
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