PSO-based Parameter Estimation of Nonlinear Kinetic Models for β-Mannanase Fermentation

Particle swarm optimization (PSO), as a novel evolutionary algorithm involved in social interaction for global space search, was firstly used in kinetic parameter estimation. Based on three developed nonlinear kinetic equations for bacterial cell growth, total sugar utilization and β-mannanase production by Bacillus licheniformis under the support of a batch fermentation process, various PSO algorithms as well as gene algorithms (GA) were developed to estimate kinetic parameters. The performance comparison among these algorithms indicates the improved PSO (Trelea 1) is most suitable for kinetic parameter estimation of β-mannanase fermentation. In order to find the physical-chemical-meanings of kinetic parameters from many optimized results, multiobjective optimization with a normalized weight method was adopted. The 9 desired parameters in equations were obtained by the Trelea 1 type PSO with two batches fermentation data, and the results predicted by the models were also in good agreement with the experimental observations

Layered hybrid phase Li2NaV2(PO4)3/carbon dot nanocomposite cathodes for Li+/Na+ mixed-ion batteries

Hybrid phase Li2NaV2(PO4)3 (H-LNVP) is one of the most promising cathode materials for Li+/Na+ mixed-ion batteries.</p

Perturbative QCD analysis of B→ϕK∗B \to \phi K^* decays

We study the first observed charmless $B\to VV$ modes, the $B\to\phi K^*$ decays, in perturbative QCD formalism. The obtained branching ratios $B(B\to\phi K^*)\sim 15 \times 10^{-6}$ are larger than $\sim 9\times 10^{-6}$ from QCD factorization. The comparison of the predicted magnitudes and phases of the different helicity amplitudes, and branching ratios with experimental data can test the power counting rules, the evaluation of annihilation contributions, and the mechanism of dynamical penguin enhancement in perturbative QCD, respectively.Comment: 14 pages, 2 tables, brief disscussion on hard sacle added, version to appear in PR

Water wave propagation and scattering over topographical bottoms

Here I present a general formulation of water wave propagation and scattering over topographical bottoms. A simple equation is found and is compared with existing theories. As an application, the theory is extended to the case of water waves in a column with many cylindrical steps

Functionalized nanoparticles targeting tumor-associated macrophages as cancer therapy

The tumor microenvironment (TME) plays a central role in regulating antitumor immune responses. As an important part of the TME, alternatively activated type 2 (M2) macrophages drive the development of primary and secondary tumors by promoting tumor cell proliferation, tumor angiogenesis, extracellular matrix remodeling and overall immunosuppression. Immunotherapy approaches targeting tumor-associated macrophages (TAMs) in order to reduce the immunosuppressive state in the TME have received great attention. Although these methods hold great potential for the treatment of several cancers, they also face some limitations, such as the fast degradation rate of drugs and drug-induced cytotoxicity of organs and tissues. Nanomedicine formulations that prevent TAM signaling and recruitment to the TME or deplete M2 TAMs to reduce tumor growth and metastasis represent encouraging novel strategies in cancer therapy. They allow the specific delivery of antitumor drugs to the tumor area, thereby reducing side effects associated with systemic application. In this review, we give an overview of TAM biology and the current state of nanomedicines that target M2 macrophages in the course of cancer immunotherapy, with a specific focus on nanoparticles (NPs). We summarize how different types of NPs target M2 TAMs, and how the physicochemical properties of NPs (size, shape, charge and targeting ligands) influence NP uptake by TAMs in vitro and in vivo in the TME. Furthermore, we provide a comparative analysis of passive and active NP-based TAM-targeting strategies and discuss their therapeutic potential.Imaging- and therapeutic targets in neoplastic and musculoskeletal inflammatory diseas

PSO-based Parameter Estimation of Nonlinear Kinetic Models for β-Mannanase Fermentation

Particle swarm optimization (PSO), as a novel evolutionary algorithm involved in social interaction for global space search, was firstly used in kinetic parameter estimation. Based on three developed nonlinear kinetic equations for bacterial cell growth, total sugar utilization and β-mannanase production by Bacillus licheniformis under the support of a batch fermentation process, various PSO algorithms as well as gene algorithms (GA) were developed to estimate kinetic parameters. The performance comparison among these algorithms indicates the improved PSO (Trelea 1) is most suitable for kinetic parameter estimation of β-mannanase fermentation. In order to find the physical-chemical-meanings of kinetic parameters from many optimized results, multiobjective optimization with a normalized weight method was adopted. The 9 desired parameters in equations were obtained by the Trelea 1 type PSO with two batches fermentation data, and the results predicted by the models were also in good agreement with the experimental observations

Delivery of the Sox9 gene promotes chondrogenic differentiation of human umbilical cord blood-derived mesenchymal stem cells in an in vitro model

SRY-related high-mobility-group box 9 (Sox9) gene is a cartilage-specific transcription factor that plays essential roles in chondrocyte differentiation and cartilage formation. The aim of this study was to investigate the feasibility of genetic delivery of Sox9 to enhance chondrogenic differentiation of human umbilical cord blood-derived mesenchymal stem cells (hUC-MSCs). After they were isolated from human umbilical cord blood within 24 h after delivery of neonates, hUC-MSCs were untreated or transfected with a human Sox9-expressing plasmid or an empty vector. The cells were assessed for morphology and chondrogenic differentiation. The isolated cells with a fibroblast-like morphology in monolayer culture were positive for the MSC markers CD44, CD105, CD73, and CD90, but negative for the differentiation markers CD34, CD45, CD19, CD14, or major histocompatibility complex class II. Sox9 overexpression induced accumulation of sulfated proteoglycans, without altering the cellular morphology. Immunocytochemistry demonstrated that genetic delivery of Sox9 markedly enhanced the expression of aggrecan and type II collagen in hUC-MSCs compared with empty vector-transfected counterparts. Reverse transcription-polymerase chain reaction analysis further confirmed the elevation of aggrecan and type II collagen at the mRNA level in Sox9-transfected cells. Taken together, short-term Sox9 overexpression facilitates chondrogenesis of hUC-MSCs and may thus have potential implications in cartilage tissue engineering.publishedVersio

Strong and Weak Phases from Time-Dependent Measurements of B→ππB \to \pi \pi

Time-dependence in $B^0(t) \to \pi^+ \pi^-$ and \ob(t) \to \pi^+ \pi^- is utilized to obtain a maximal set of information on strong and weak phases. One can thereby check theoretical predictions of a small strong phase $\delta$ between penguin and tree amplitudes. A discrete ambiguity between $\delta \simeq 0$ and $\delta \simeq \pi$ may be resolved by comparing the observed charge-averaged branching ratio predicted for the tree amplitude alone, using measurements of $B \to \pi l \nu$ and factorization, or by direct comparison of parameters of the Cabibbo-Kobayashi-Maskawa (CKM) matrix with those determined by other means. It is found that with 150 fb$^{-1}$ from BaBar and Belle, this ambiguity will be resolvable if no direct CP violation is found. In the presence of direct CP violation, the discrete ambiguity between $\delta$ and $\pi - \delta$ becomes less important, vanishing altogether as $|\delta| \to \pi/2$. The role of measurements involving the lifetime difference between neutral $B$ eigenstates is mentioned briefly.Comment: 14 pages, LaTeX, 5 figures, to be published in Phys. Rev. D. Updated version with one reference change

On supersymmetric contributions to the CP asymmetry of the B -> phi K_S

We analyse the CP asymmetry of the B -> phi K_S process in general supersymmetric models. In the framework of the mass insertion approximation, we derive model independent limits for the mixing CP asymmetry. We show that chromomagnetic type of operator may play an important role in accounting for the deviation of the mixing CP asymmetry between B -> phi K_S and B -> J/psi K_S processes observed by Belle and BaBar experiments. A possible correlation between the direct and mixing CP asymmetry is also discussed. Finally, we apply our result in minimal supergravity model and supersymmetric models with non-universal soft terms.Comment: 19 pages, 3 figure

Exploring CP Violation through Correlations in B --> pi K, B_d --> pi^+pi^-, B_s --> K^+K^- Observable Space

We investigate allowed regions in observable space of B --> pi K, B_d --> pi^+pi^- and B_s --> K^+K^- decays, characterizing these modes in the Standard Model. After a discussion of a new kind of contour plots for the $B\to\pi K$ system, we focus on the mixing- induced and direct CP asymmetries of the decays B_d --> pi^+pi^- and B_s--> K^+K^-. Using experimental information on the CP-averaged B_d --> pi^{+/-}K^{+/-} and B_d --> pi^+pi^- branching ratios, the relevant hadronic penguin parameters can be constrained,implying certain allowed regions in observable space. In the case of B_d --> pi^+pi^-, an interesting situation arises now in view of the recent B-factory measurements of CP violation in this channel, allowing us to obtain new constraints on the CKM angle gamma as a function of the B^0_d--\bar{B^0_d} mixing phase phi_d=2beta, which is fixed through A_{CP}^{mix}(B_d --> J/psi K_S) up to a twofold ambiguity. If we assume that A_{CP}^{mix}(B_d --> pi^+pi^-) is positive, as indicated by recent Belle data, and that phi_d is in agreement with the ``indirect'' fits of the unitarity triangle, also the corresponding values for gamma around 60 degrees can be accommodated. On the other hand, for the second solution of phi_d, we obtain a gap around gamma ~ 60 degrees. The allowed region in the space of A_{CP}^{mix}(B_s --> K^+K^-) and A_{CP}^{dir}(B_s --> K^+K^-) is very constrained in the Standard Model, thereby providing a narrow target range for run II of the Tevatron and the experiments of the LHC era.Comment: 34 pages, LaTeX, 12 figures. More detailed introduction and a few Comments added, conclusions unchanged. To appear in Phys. Rev.