High frequency variations of Helicobacter pylori isolates in individual hosts in a Chinese population

SummaryBackgroundColonization of individual hosts by multiple Helicobacter pylori genotypes may be one reason why this infection is persistent and difficult to eradicate.MethodsIn order to study the diversity of H. pylori in individuals, a modified randomly amplified polymorphic DNA (RAPD) method was applied using primary culture isolates instead of passaged cultures.ResultsThe results showed that variations in H. pylori were prevalent among individuals in the Chinese population, and the incidence of multiple colonization was 99.1% (115/116), significantly higher than in other reports. Moreover, the number of RAPD genotypes was found to be significantly associated with the process of disease development (p<0.05). Indeed, a trend for a higher number of RAPD genotypes within a single host (up to five genotypes) was observed as the disease developed or became more serious. After subculturing for three generations in our experiment, some genotypes present in the primary cultures were lost. The different genotypes in one patient may have originated from a single ancestral strain, as determined by analysis of six H. pylori housekeeping gene alleles, most of which were shown to be identical.ConclusionsThese results suggest that investigating isolates of the primary culture will better reflect the H. pylori diversity in individuals. Also, they indicate that continuous variation of one strain in the gastric microenvironment may be the main cause of H. pylori diversity in individuals in the Chinese population

Magnetic phase diagram in Eu1−x_{1-x}Lax_xFe2_2As2_2 single crystals

We have systematically measured resistivity, susceptibility and specific heat under different magnetic fields (H) in Eu$_{1-x}$La$_x$Fe$_2$As$_2$ single crystals. It is found that a metamagnetic transition from A-type antiferromagnetism to ferromagnetism occurs at a critical field for magnetic sublattice of $Eu^{2+}$. The jump of specific heat is suppressed and shifts to low temperature with increasing H up to the critical value, then shifts to high temperature with further increasing H. Such behavior supports the metamagnetic transition. Detailed H-T phase diagrams for x=0 and 0.15 crystals are given, and possible magnetic structure is proposed. Magnetoresistance measurements indicate that there exists a strong coupling between local moment of $Eu^{2+}$ and charge in Fe-As layer. These results are very significant to understand the underlying physics of FeAs superconductors.Comment: 5 pages, 4 figure

Novel D-hordein-like HMW glutenin sequences isolated from Psathyrostachys juncea by thermal asymmetric interlaced PCR

New high-molecular-weight glutenin (HMW glutenin) sequences isolated from six Psathyrostachys juncea accessions by thermal asymmetric interlaced PCR differ from previous sequences from this species. They showed novel modifications in all of the structural domains, with unique C-terminal residues, and their N-terminal lengths were the longest among the HMW glutenins reported to date. In their repetitive domains, there were three repeatable motif units: 13-residue [GYWH(/I/Y)YT(/Q)S(/T)VTSPQQ], hexapeptide (PGQGQQ), and tetrapeptide (ITVS). The 13-residue repeats were restricted to the current sequences, while the tetrapeptides were only shared by D-hordein and the current sequences. However, these sequences were not expressed as normal HMW glutenin proteins because an in-frame stop codon located in the C-termini interrupted the intact open reading frames. A phylogenetic analysis supported different origins of the P. juncea HMW glutenin sequences than that revealed by a previous study. The current sequences showed a close relationship with D-hordein but appeared to be more primitive

The Lunar Mare Ring-Moat Dome Structure (RMDS) Age Conundrum:Contemporaneous With Imbrian-Aged Host Lava Flows or Emplaced in the Copernican?

Ring-moat dome structures (RMDSs) are small circular mounds of diameter typically about 200 m and ∼3–4 m in height, surrounded by narrow, shallow moats. They occur in clusters, are widespread in ancient Imbrian-aged mare basalt host units and show mineralogies comparable to those of their host units. Based on these close associations and similarities, a model has been proposed for the formation of RMDS as the result of late-stage flow inflation, with second boiling releasing quantities of magmatic volatiles that migrate to the top of the flow as magmatic foams and extrude through cracks in the cooled upper part of the flow to produce the small RMDS domes and surrounding moats. In contrast to this model advocating a contemporaneous emplacement of RMDSs and their host lava flows, a range of observations suggests that the RMDS formed significantly after the emplacement and cooling of their host lava flows, perhaps as recently as in the Copernican Period (∼1.1 Ga to the present). These observations include: (a) stratigraphic embayment of domes into post-lava flow emplacement impact craters; (b) young crater degradation age estimates for the underlying embayed craters; (c) regolith development models that predict thicknesses in excess of the observed topography of domes and moats; (d) landform diffusional degradation models that predict very young ages for mounds and moats; (e) suggestions of fewer superposed craters on the mounds than on the adjacent host lava flows, and (f) observations of superposed craters that suggest that the mound substrate does not have the properties predicted by the magmatic foam model. Together, these observations are consistent with the RMDS formation occurring during the period after the extrusion and solidification of the host lava flows, up to and including the geologically recent Late Copernican, that is, the last few hundreds of millions of years of lunar history. We present and discuss each of these contradictory data and interpretations and summarize the requirements for magma ascent and eruption models that might account for young RMDS ages. We conclude with a discussion of the tests and future research and exploration that might help resolve the RMDS age and mode of emplacement conundrum

Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control

Cleavage of transfer (t)RNA and ribosomal (r)RNA are critical and conserved steps of translational control for cells to overcome varied environmental stresses. However, enzymes that are responsible for this event have not been fully identified in high eukaryotes. Here, we report a mammalian tRNA/rRNA-targeting endoribonuclease: SLFN13, a member of the Schlafen family. Structural study reveals a unique pseudo-dimeric U-pillow-shaped architecture of the SLFN13 N'-domain that may clamp base-paired RNAs. SLFN13 is able to digest tRNAs and rRNAs in vitro, and the endonucleolytic cleavage dissevers 11 nucleotides from the 3'-terminus of tRNA at the acceptor stem. The cytoplasmically localised SLFN13 inhibits protein synthesis in 293T cells. Moreover, SLFN13 restricts HIV replication in a nucleolytic activity-dependent manner. According to these observations, we term SLFN13 RNase S13. Our study provides insights into the modulation of translational machinery in high eukaryotes, and sheds light on the functional mechanisms of the Schlafen family

Search for the Rare Decays J/Psi --> Ds- e+ nu_e, J/Psi --> D- e+ nu_e, and J/Psi --> D0bar e+ e-

We report on a search for the decays J/Psi --> Ds- e+ nu_e + c.c., J/Psi --> D- e+ nu_e + c.c., and J/Psi --> D0bar e+ e- + c.c. in a sample of 5.8 * 10^7 J/Psi events collected with the BESII detector at the BEPC. No excess of signal above background is observed, and 90% confidence level upper limits on the branching fractions are set: B(J/Psi --> Ds- e+ nu_e + c.c.)<4.8*10^-5, B(J/Psi --> D- e+ nu_e + c.c.) D0bar e+ e- + c.c.)<1.1*10^-5Comment: 10 pages, 4 figure

Study of J/psi decays to Lambda Lambdabar and Sigma0 Sigma0bar

The branching ratios and Angular distributions for J/psi decays to Lambda Lambdabar and Sigma0 Sigma0bar are measured using BESII 58 million J/psi.Comment: 11 pages, 5 figure

Measurements of J/psi Decays into 2(pi+pi-)eta and 3(pi+pi-)eta

Based on a sample of 5.8X 10^7 J/psi events taken with the BESII detector, the branching fractions of J/psi--> 2(pi+pi-)eta and J/psi-->3(pi+pi-)eta are measured for the first time to be (2.26+-0.08+-0.27)X10^{-3} and (7.24+-0.96+-1.11)X10^{-4}, respectively.Comment: 11 pages, 6 figure