1,101 research outputs found

    Non-Linear Transport through a Molecular Nanojunction

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    We present a simple model of electrical transport through a metal-molecule-metal nanojunction that includes charging effects as well as aspects of the electronic structure of the molecule. The interplay of a large charging energy and an asymmetry of the metal-molecule coupling can lead to various effects in non-linear electrical transport. In particular, strong negative differential conductance is observed under certain conditions.Comment: 7 pages, 5 figures, accepted by Europhys. Let

    The anisotropic quantum antiferromagnet on the Sierpinski gasket: Ground state and thermodynamics

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    We investigate an antiferromagnetic s=1/2 quantum spin system with anisotropic spin exchange on a fractal lattice, the Sierpinski gasket. We introduce a novel approximative numerical method, the configuration selective diagonalization (CSD) and apply this method to the Sierpinski gasket with N=42. Using this and other methods we calculate ground state energies, spin gap, spin-spin correlations and specific heat data and conclude that the s=1/2 quantum antiferromagnet on the Sierpinski gasket shows a disordered magnetic ground state with a very short correlation length of about 1 and an, albeit very small, spin gap. This conclusion holds for Heisenberg as well a for XY exchange.Comment: LaTeX: 16 pages, 9 figures, 1 tabl

    Predictive in Silico All-Atom Folding of a Four-Helix Protein with a Free-Energy Model

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    CONI-Net: Machine Learning of Separable Intermolecular Force Fields

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    Calculation of the "absolute" free energy of a Ăź-hairpin in an all-atom force field

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    Challenges and limits of mechanical stability in 3D direct laser writing

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    Direct laser writing is an effective technique for fabrication of complex 3D polymer networks using ultrashort laser pulses. Practically, it remains a challenge to design and fabricate high performance materials with different functions that possess a combination of high strength, substantial ductility, and tailored functionality, in particular for small feature sizes. To date, it is difficult to obtain a time-resolved microscopic picture of the printing process in operando. To close this gap, we herewith present a molecular dynamics simulation approach to model direct laser writing and investigate the effect of writing condition and aspect ratio on the mechanical properties of the printed polymer network. We show that writing conditions provide a possibility to tune the mechanical properties and an optimum writing condition can be applied to fabricate structures with improved mechanical properties. We reveal that beyond the writing parameters, aspect ratio plays an important role to tune the stiffness of the printed structures

    Multiparticle moves in acceptance rate optimized Monte Carlo

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    Accurate calculation of second osmotic virial coefficients of proteins using mixed Poisson–Boltzmann and extended DLVO theory

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    The state of proteins in aqueous solution is determined by weak, nonspecific interactions affected by pH, solvent composition, and ionic strength. Protein–protein interactions play a crucial role in determining protein stability and solubility. The second osmotic coefficient (B22_{22}) provides insight into effective interactions between proteins in solution. Models for calculating B22_{22} are valuable for estimating interactions, explaining measured phenomena, and reducing experimental time. However, existing models, like the Derjaguin–Landau–Verwey–Overbeek (DLVO) theory, assume a simple spherical shape for proteins. Owing to the fact that proteins exhibit diverse shapes and charge distributions, influencing their electrostatic properties and overall interactions, DLVO accuracy is significantly reduced for nonspherical proteins. To address this limitation, we introduce the xDLVO-CGhybr model, which combines Poisson–Boltzmann (PB) and Debye–Hückel (DH) theories to account for electrostatic interactions between proteins. PB is used for short intermolecular distances (<2 nm) with an all-atom resolution, while DH is employed for longer distances on a coarse-grained level. Additionally, xDLVO-CGhybr incorporates an improved coarse-grained Lennard-Jones (LJ) potential derived directly from the all-atom potential to capture dispersion interactions. This model improves the calculated B22 values compared to existing models and can be applied to proteins with arbitrary shape and charge under various solvent conditions (up to 1 M monovalent salt concentration). We demonstrate the application of xDLVO-CGhybr to bovine trypsin inhibitor, ribonuclease A, chymotrypsinogen, concanavalin A, bovine serum albumin, and human immunoglobulin type I proteins, validating the model against experimental data

    Discovery of the high-field polar RX J1724.0+4114

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    We report the discovery of a new AM Herculis binary (polar) as the optical counterpart of the soft X-ray source RX J1724.0+4114 detected during the ROSAT all-sky survey. The magnetic nature of this V~17 mag object is confirmed by low-resolution spectroscopy showing strong Balmer and HeII emission lines superimposed on a blue continuum which is deeply modulated by cyclotron humps. The inferred magnetic field strength is 50+/-4 MG (or possibly even ~70 MG). Photometric observations spanning ~3 years reveal a period of 119.9 min, right below the period gap. The morphology of the optical and X-ray light curves which do not show eclipses by the secondary star, suggests a self-eclipsing geometry. We derive a lower limit of d~250 pc.Comment: 6 pages, LATEX with mn.sty, incl 4 Figs., to appear in MNRAS; [email protected]
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