34 research outputs found

    Laser-Assisted Fabrication of NMR Resonators

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    A detection coil for use in nuclear resonance magnetic (NMR) spectroscopy and a method of manufacture thereof. At least two film layers of material are deposited on an outer surface of a cylindrical tube of dielectric material. The layers are patterned to form a solenoid on the tube. At least one of the deposited materials is a conductor

    Apparent disagreement between cyclic voltammetry and electrochemical impedance spectroscopy explained by time-domain simulation of constant phase elements

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    A selection of electrodes was analysed using cyclic-voltammetry (CV) and electrochemical impedance spectroscopy (EIS), and a large apparent resistance was observed with CV that was absent with EIS. The explanation for this resistance anomaly was traced to the constant phase element (CPE) behaviour which is exhibited by the electrode double-layer capacitance. Computer simulations of the transient-response of an RQ network (where Q represents a CPE) to a voltage ramp revealed bi-exponential behaviour, with two separate time-constants. One is equal to the product of R and Q, but the other is fixed at about 0.3 s. This finding is supported by observation, by mathematical derivation, and by a novel mixed-domain five-component equivalent circuit model. In addition, example code is provided as a basis for transient simulations of constant phase elements with arbitrary voltage waveforms. This explanation assists in the correct interpretation of potentially misleading cyclic voltammetry results

    Cancer Biomarker Discovery: The Entropic Hallmark

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    Background: It is a commonly accepted belief that cancer cells modify their transcriptional state during the progression of the disease. We propose that the progression of cancer cells towards malignant phenotypes can be efficiently tracked using high-throughput technologies that follow the gradual changes observed in the gene expression profiles by employing Shannon's mathematical theory of communication. Methods based on Information Theory can then quantify the divergence of cancer cells' transcriptional profiles from those of normally appearing cells of the originating tissues. The relevance of the proposed methods can be evaluated using microarray datasets available in the public domain but the method is in principle applicable to other high-throughput methods. Methodology/Principal Findings: Using melanoma and prostate cancer datasets we illustrate how it is possible to employ Shannon Entropy and the Jensen-Shannon divergence to trace the transcriptional changes progression of the disease. We establish how the variations of these two measures correlate with established biomarkers of cancer progression. The Information Theory measures allow us to identify novel biomarkers for both progressive and relatively more sudden transcriptional changes leading to malignant phenotypes. At the same time, the methodology was able to validate a large number of genes and processes that seem to be implicated in the progression of melanoma and prostate cancer. Conclusions/Significance: We thus present a quantitative guiding rule, a new unifying hallmark of cancer: the cancer cell's transcriptome changes lead to measurable observed transitions of Normalized Shannon Entropy values (as measured by high-throughput technologies). At the same time, tumor cells increment their divergence from the normal tissue profile increasing their disorder via creation of states that we might not directly measure. This unifying hallmark allows, via the the Jensen-Shannon divergence, to identify the arrow of time of the processes from the gene expression profiles, and helps to map the phenotypical and molecular hallmarks of specific cancer subtypes. The deep mathematical basis of the approach allows us to suggest that this principle is, hopefully, of general applicability for other diseases

    Laser-Assisted Fabrication of NMR Resonators

    No full text
    A detection coil for use in nuclear resonance magnetic (NMR) spectroscopy and a method of manufacture thereof. At least two film layers of material are deposited on an outer surface of a cylindrical tube of dielectric material. The layers are patterned to form a solenoid on the tube. At least one of the deposited materials is a conductor

    Stable isotopic ratios, shell lengths and organochlorine compounds in four bivalve species collected in July 2009 around Svalbard

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    Organochlorine compounds (OC) were determined in Arctic bivalves (Mya truncata, Serripes groenlan-dicus, Hiatella arctica and Chlamys islandica) from Svalbard with regard to differences in geographic location, species and variations related to their size and age. Higher chlorinated polychlorinated biphenyls (PCB 101-PCB 194), chlordanes and alpha-hexachlorocyclohexane (alpha-HCH) were consistently detected in the bivalves and PCBs dominated the OC load in the organisms. OC concentrations were highest in Mya truncata and the lowest in Serripes groenlandicus. Species-specific OC levels were likely related to differences in the species' food source, as indicated by the d13C results, rather than size and age. Higher OC concentrations were observed in bivalves from Kongsfjorden compared to the northern sampling locations Liefdefjorden and Sjuoyane. The spatial differences might be related to different water masses influencing Kongsfjorden (Atlantic) and the northern locations (Arctic), with differing phytoplankton bloom situations
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