Differential effects of SARS-CoV-2 variants on central nervous system cells and blood-brain barrier functions

BACKGROUND: Although mainly causing a respiratory syndrome, numerous neurological symptoms have been identified following of SARS-CoV-2 infection. However, how the virus affects the brain and how the mutations carried by the different variants modulate those neurological symptoms remain unclear. METHODS: We used primary human pericytes, foetal astrocytes, endothelial cells and a microglial cell line to investigate the effect of several SARS-CoV-2 variants of concern or interest on their functional activities. Cells and a 3D blood-brain barrier model were infected with the wild-type form of SARS-CoV-2, Alpha, Beta, Delta, Eta, or Omicron (BA.1) variants at various MOI. Cells and supernatant were used to evaluate cell susceptibility to the virus using a microscopic assay as well as effects of infection on (i) cell metabolic activity using a colorimetric MTS assay; (ii) viral cytopathogenicity using the xCELLigence system; (iii) extracellular glutamate concentration by fluorometric assay; and (iv) modulation of blood-brain barrier permeability. RESULTS: We demonstrate that productive infection of brain cells is SARS-CoV-2 variant dependent and that all the variants induce stress to CNS cells. The wild-type virus was cytopathic to all cell types except astrocytes, whilst Alpha and Beta variants were only cytopathic for pericytes, and the Omicron variant cytopathic for endothelial cells and pericytes. Lastly wild-type virus increases blood-brain barrier permeability and all variants, except Beta, modulate extracellular glutamate concentration, which can lead to excitotoxicity or altered neurotransmission. CONCLUSIONS: These results suggest that SARS-CoV-2 is neurotropic, with deleterious consequences for the blood-brain barrier integrity and central nervous system cells, which could underlie neurological disorders following SARS-CoV-2 infection

Image conditions for machine-based face recognition of juvenile faces

Machine-based facial recognition could help law enforcement and other organisations to match juvenile faces more efficiently. It is especially important when dealing with indecent images of children to minimise the workload, and deal with moral and stamina challenges related to human recognition. With growth related changes, juvenile face recognition is challenging. The challenge not only relates to the growth of the child’s face, but also to face recognition in the wild with unconstrained images. The aim of the study was to evaluate how different conditions (i.e. black and white, cropped, blur and resolution reduction) can affect machine-based facial recognition of juvenile age progression. The study used three off-the-shelf facial recognition algorithms (Microsoft Face API, Amazon Rekognition, and Face++) and compared the original images and the age progression images under the four image conditions against an older image of the child. The results showed a decrease in facial similarity with an increased age gap, in comparison to Microsoft; Amazon and Face++ showed higher confidence scores and are more resilient to a change in image condition. The image condition ‘black and white’ and ‘cropped’ had a negative effect across all three softwares. The relationship between age progression images and the younger original image was explored. The results suggest manual age progression images are no more useful than the original image for facial identification of missing children, and Amazon and Face++ performed better with the original image

A guided manual method for juvenile age progression using digital images

Predicting the possible age-related changes to a child’s face, age progression methods modify the shape, colour and texture of a facial image while retaining the identity of the individual. However, the techniques vary between different practitioners. This study combines different age progression techniques for juvenile subjects, various researches based on longitudinal radiographic data; physical anthropometric measurements of the head and face; and digital image measurements in pixels. Utilising 12 anthropometric measurements of the face, this study documents a new workflow for digital manual age progression. An inter-observer error study (n = 5) included the comparison of two age progressions of the same individual at different ages. The proposed age progression method recorded satisfactory levels of repeatability based on the 12 anthropometric measurements. Seven measurements achieved an error below 8.60%. Facial anthropometric measurements involving the nasion (n) and trichion (tr) showed the most inconsistency (14–34% difference between the practitioners). Overall, the horizontal measurements were more accurate than the vertical measurements. The age progression images were compared using a manual morphological method and machine-based face recognition. The confidence scores generated by the three different facial recognition APIs suggested the performance of any age progression not only varies between practitioners, but also between the Facial recognition systems. The suggested new workflow was able to guide the positioning of the facial features, but the process of age progression remains dependant on artistic interpretation

A miniature bioassay for testing the acute phytotoxicity of photosystem II herbicides on seagrass

© 2015 Wilkinson et al. Photosystem II (PSII) herbicides have been detected in nearshore tropical waters such as those of the Great Barrier Reef and may add to the pressure posed by runoff containing sediments and nutrients to threatened seagrass habitats. There is a growing number of studies into the potential effects of herbicides on seagrass, generally using large experimental set-ups with potted plants. Here we describe the successful development of an acute 12-well plate phytotoxicity assay for the PSII herbicide Diuron using isolated Halophila ovalis leaves. Fluorescence images demonstrated Diuron affected the entire leaf surface evenly and responses were not influenced by isolating leaves from the plant. The optimum exposure duration was 24 h, by which time the inhibition of effective quantum yield of PSII (ΔF/Fm′) was highest and no deterioration of photosystems was evident in control leaves. The inhibition of ΔF/Fm′ by Diuron in isolated H. ovalis leaves was identical to both potted and hydroponically grown plants (with leaves remaining attached to rhizomes), indicating similar reductions in photosynthetic activity in these acute well-plate assays. The sensitivity of the assay was not influenced by irradiance (range tested 40 to 400 μmol photons m-2 s-1). High irradiance, however, caused photo-oxidative stress in H. ovalis and this generally impacted in an additive or sub-additive way with Diuron to damage PSII. The bioassay using isolated leaves is more rapid, uses far less biological material and does not rely on specialised aquarium facilities in comparison with assays using potted plants. The development and validation of this sensitive bioassay will be useful to reliably screen and monitor the phytotoxicity of existing and emerging PSII herbicides and contribute to risk assessments and water quality guideline development in the future

The effect of exercise training interventions in adult kidney transplant recipients: a systematic review and meta-analysis of randomised control trials

Background: Kidney transplant recipients (KTRs) are characterised by adverse changes in physical fitness and body composition. Post-transplant management involves being physically active, although evidence for the effect of exercise is limited. Objective: To assess the effects of exercise training interventions in KTRs. Methods: NCBI PubMed (MEDLINE) and CENTRAL (EMBASE, WHO ICTRP) databases were searched up to March 2021 to identify eligible randomized controlled trials (RCTs) that studied exercise training in adult KTRs. Outcomes included exercise capacity, strength, blood pressure, body composition, heart rate, markers of dyslipidaemia and renal function, and health-related quality of life (QoL). Results: Sixteen RCTs, containing 827 KTRs, were included. The median intervention length was 14-weeks with participants exercising between 2–7x/week. Most studies used a mixture of aerobic and resistance exercise. Significant improvements were observed in cardiorespiratory function (VO2peak) (3.21 ml/kg/min, p = 0.003), 6MWT (76.3 meters, p = 0.009), physical function (STS-60, 4.8 repetitions, p = 0.04), and high-density lipoprotein (HDL) (0.13 mg/dL, p = 0.03). A moderate increase in maximum heart rate was seen (p = 0.06). A moderate reduction in creatinine was also observed (0.14 mg/dl, p = 0.05). Isolated studies reported improvements in strength, bone health, lean mass, and QoL. Overall, studies had high risk of bias suggestive of publication bias. Conclusions: Exercise training may confer several benefits in adult KTRs, particularly by increasing cardiorespiratory function and exercise capacity, strength, HDL levels, maximum heart rate, and improving QoL. Additional long-term large sampled RCTs, incorporating complex interventions requiring both exercise and dietary behaviour change, are needed to fully understand the effects of exercise in KTRs

Weyl Equation and (Non)-Commutative SU(n+1) BPS Monopoles

We apply the ADHMN construction to obtain the SU(n+1)(for generic values of n) spherically symmetric BPS monopoles with minimal symmetry breaking. In particular, the problem simplifies by solving the Weyl equation, leading to a set of coupled equations, whose solutions are expressed in terms of the Whittaker functions. Next, this construction is generalized for non-commutative SU(n+1) BPS monopoles, where the corresponding solutions are given in terms of the Heun B functions.Comment: 16 pages, Latex. Few typos corrected, version to appear in JHE

Mycobacterium tuberculosis cords within lymphatic endothelial cells to evade host immunity

The ability of Mycobacterium tuberculosis to form serpentine cords is intrinsically related to its virulence, but specifically how M. tuberculosis cording contributes to pathogenesis remains obscure. Here, we show that several M. tuberculosis clinical isolates form intracellular cords in primary human lymphatic endothelial cells (hLECs) in vitro and in the lymph nodes of patients with tuberculosis. We identified via RNA-Seq a transcriptional program that activated, in infected-hLECs, cell survival and cytosolic surveillance of pathogens pathways. Consistent with this, cytosolic access was required for intracellular M. tuberculosis cording. Mycobacteria lacking ESX-1 type VII secretion system or phthiocerol dimycocerosates expression, which failed to access the cytosol, were indeed unable to form cords within hLECs. Finally, we show that M. tuberculosis cording is a size-dependent mechanism used by the pathogen to avoid its recognition by cytosolic sensors and evade either resting or IFN-γ–induced hLEC immunity. These results explain the long-standing association between M. tuberculosis cording and virulence and how virulent mycobacteria use intracellular cording as strategy to successfully adapt and persist in the lymphatic tracts

A Physically-based, Subgrid Parametrization for the Production and Maintenance of Mixed-phase Clouds in a General Circulation Model

A physically based method for parametrizing the role of subgrid scale turbulence in the production and maintenance of supercooled liquid water and mixed-phase clouds is presented. The approach used is to simplify the dynamics of supersaturation fluctuations to a stochastic differential equation that can be solved analytically, giving increments to the prognostic liquid cloud fraction and liquid water content fields in a General Circulation Model (GCM). Elsewhere, it has been demonstrated that the approach captures the properties of decameter-resolution Large Eddy Simulations of a turbulent mixed-phase environment. In this paper it is shown that it can be implemented in a GCM and the effects that this has on Southern Ocean biases and on Arctic stratus are investigated