1,984 research outputs found
Coupling the Deconfining and Chiral Transitions
The Polyakov loop and the chiral condensate are used as order parameters to
explore analytically the possible phase structure of finite temperature QCD.
Nambu-Jona-Lasinio models in a background temporal gauge field are combined
with a Polyakov loop potential in a form suitable for both the lattice and the
continuum. Three possible behaviors are found: a first-order transition, a
second-order transition, and a region with both transitions.Comment: 4 pages, LaTeX, 4 Postscript Figures, uuencoded, Contribution to
Lattice 95 Conference Proceeding
Landau-Ginsberg Theory of Quark Confinement
We describe the SU(3) deconfinement transition using Landau-Ginsberg theory.
Drawing on perturbation theory and symmetry principles, we construct the free
energy as a function of temperature and the Polyakov loop. Once the two
adjustable parameters of the model are fixed, the pressure p, energy epsilon
and Polyakov loop expectation value P_F are calculable functions of
temperature. An excellent fit to the continuum extrapolation of lattice
thermodynamics data can be achieved. In an extended form of the model, the
glueball potential is responsible for breaking scale invariance at low
temperatures. Three parameters are required, but the glueball mass and the
gluon condensate are calculable functions of temperature, along with p, epsilon
and P_F.Comment: Lattice99(Finite Temperature and Density) <= added keywords only
change in revised version, sorry; 3 pages, LaTeX with espcrc2.sty and
epsf.tex. Talk presented at Lattice99, Pisa, 29 June - 3 July 1999, to appear
in Nucl. Phys. B (Proc.Suppl.
Complete High Temperature Expansions for One-Loop Finite Temperature Effects
We develop exact, simple closed form expressions for partition functions
associated with relativistic bosons and fermions in odd spatial dimensions.
These expressions, valid at high temperature, include the effects of a
non-trivial Polyakov loop and generalize well-known high temperature
expansions. The key technical point is the proof of a set of Bessel function
identities which resum low temperature expansions into high temperature
expansions. The complete expressions for these partition functions can be used
to obtain one-loop finite temperature contributions to effective potentials,
and thus free energies and pressures.Comment: 9 pages, RevTeX, no figures. To be published in Phys. Rev D. v2 has
revised introduction and conclusions, plus a few typographical errors are
corrected; v3 corrects one typ
Finite Temperature Quark Confinement
Confinement may be more easily demonstrated at finite temperature using the
Polyakov loop than at zero temperature using the Wilson loop. A natural
mechanism for confinement can arise via the coupling of the adjoint Polyakov
loop to F_{mu nu}^2. We demonstrate this mechanism with a one-loop calculation
of the effective potential for SU(2) gluons in a background field consisting of
a non-zero color magnetic field and a non-trivial Polyakov loop. The color
magnetic field drives the Polyakov loop to non-trivial behavior, and the
Polyakov loop can remove the well-known tachyonic mode associated with the
Saviddy vacuum. Minimizing the real part of the effective potential leads to
confinement, as determined by the Polyakov loop. Unfortunately, we cannot
arrange for simultaneous stability and confinement for this simple class of
field configurations. We show for a large class of abelian background fields
that at one loop tachyonic modes are necessary for confinement.Comment: 15 pages, 7 figures, RevTe
Structure-based stabilization of insulin as a therapeutic protein assembly via enhanced aromatic-aromatic interactions
Key contributions to protein structure and stability are provided by weakly polar interactions, which arise from asymmetric electronic distributions within amino acids and peptide bonds. Of particular interest are aromatic side chains whose directional Ï-systems commonly stabilize protein interiors and interfaces. Here, we consider aromatic-aromatic interactions within a model protein assembly: the dimer interface of insulin. Semi-classical simulations of aromatic-aromatic interactions at this interface suggested that substitution of residue TyrB26 by Trp would preserve native structure while enhancing dimerization (and hence hexamer stability). The crystal structure of a [TrpB26]insulin analog (determined as a T3Rf3 zinc hexamer at a resolution of 2.25 Ă
) was observed to be essentially identical to that of WT insulin. Remarkably and yet in general accordance with theoretical expectations, spectroscopic studies demonstrated a 150-fold increase in the in vitro lifetime of the variant hexamer, a critical pharmacokinetic parameter influencing design of long-acting formulations. Functional studies in diabetic rats indeed revealed prolonged action following subcutaneous injection. The potency of the TrpB26-modified analog was equal to or greater than an unmodified control. Thus, exploiting a general quantum-chemical feature of protein structure and stability, our results exemplify a mechanism-based approach to the optimization of a therapeutic protein assembly
Common datastream permutations of animal social network data are not appropriate for hypothesis testing using regression models
1. Social network methods have become a key tool for describing, modelling and testing hypotheses about the social structures of animals. However, due to the non-independence of network data and the presence of confounds, specialised statistical techniques are often needed to test hypotheses in these networks. Datastream permutations, originally developed to test the null hypothesis of random social structure, have become a popular tool for testing a wide array of null hypotheses in animal social networks. In particular, they have been used to test whether exogenous factors are related to network structure by interfacing these permutations with regression models.2. Here, we show that these datastream permutations typically do not represent the null hypothesis of interest to researchers interfacing animal social network analysis with regression modelling, and use simulations to demonstrate the potential pitfalls of using this methodology.3. Our simulations show that, if used to indicate whether a relationship exists between network structure and a covariate, datastream permutations can result in extremely high type I error rates, in some cases approaching 50%. In the same set of simulations, traditional node-label permutations produced appropriate type I error rates (~5%).4. Our analysis shows that datastream permutations do not represent the appropriate null hypothesis for these analyses. We suggest that potential alternatives to this procedure may be found in regarding the problems of non-independence of network data and unreliability of observations separately. If biases introduced during data collection can be corrected, either prior to model fitting or within the model itself, node-label permutations then serve as a useful test for interfacing animal social network analysis with regression modelling
Physical characteristics and non-keplerian orbital motion of "propeller" moons embedded in Saturn's rings
We report the discovery of several large "propeller" moons in the outer part
of Saturn's A ring, objects large enough to be followed over the 5-year
duration of the Cassini mission. These are the first objects ever discovered
that can be tracked as individual moons, but do not orbit in empty space. We
infer sizes up to 1--2 km for the unseen moonlets at the center of the
propeller-shaped structures, though many structural and photometric properties
of propeller structures remain unclear. Finally, we demonstrate that some
propellers undergo sustained non-keplerian orbit motion. (Note: This arXiv
version of the paper contains supplementary tables that were left out of the
ApJL version due to lack of space).Comment: 9 pages, 4 figures; Published in ApJ
Sexâspecific activation of SK current by isoproterenol facilitates action potential triangulation and arrhythmogenesis in rabbit ventricles
Sex has a large influence on cardiac electrophysiological properties. Whether sex differences exist in apaminâsensitive small conductance Ca2+âactivated K+ (SK) current (IKAS) remains unknown. We performed optical mapping, transmembrane potential, patch clamp, western blot and immunostaining in 62 normal rabbit ventricles, including 32 females and 30 males. IKAS blockade by apamin only minimally prolonged action potential (AP) duration (APD) in the basal condition for both sexes, but significantly prolonged APD in the presence of isoproterenol in females. Apamin prolonged APD at the level of 25% repolarization (APD25) more prominently than APD at the level of 80% repolarization (APD80), consequently reversing isoproterenolâinduced AP triangulation in females. In comparison, apamin prolonged APD to a significantly lesser extent in males and failed to restore the AP plateau during isoproterenol infusion. IKAS in males did not respond to the Lâtype calcium current agonist BayK8644, but was amplified by the casein kinase 2 (CK2) inhibitor 4,5,6,7âtetrabromobenzotriazole. In addition, wholeâcell outward IKAS densities in ventricular cardiomyocytes were significantly larger in females than in males. SK channel subtype 2 (SK2) protein expression was higher and the CK2/SK2 ratio was lower in females than in males. IKAS activation in females induced negative intracellular Ca2+âvoltage coupling, promoted electromechanically discordant phase 2 repolarization alternans and facilitated ventricular fibrillation (VF). Apamin eliminated the negative Ca2+âvoltage coupling, attenuated alternans and reduced VF inducibility, phase singularities and dominant frequencies in females, but not in males. We conclude that ÎČâadrenergic stimulation activates ventricular IKAS in females to a much greater extent than in males. IKAS activation plays an important role in ventricular arrhythmogenesis in females during sympathetic stimulation
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