Investigating Red Knot Migration Ecology along the Georgia and South Carolina Coasts: Spring 2019 Season Summaries

The rufa subspecies of the Red Knot (Calidris canutus) has declined significantly in the past 35 years, leading to federal listing (US Fish and Wildlife Service Federal Register Vol. 79 No. 238, 2014a) under the Endangered Species Act in the United States (16 U.S.C. 1531 et. seq) and Canada (COSEWIC 2007, SARA 2007). Evidence for the decline is seen in long-term surveys of a major spring staging site (Dunne et al 1982, Clark et al. 1993, Niles et al. 2008) and the largest known over-wintering site (Morrison et al. 2004). In only 30 years, the estimated population has declined from 100,000-150,000 to possibly below 30,000 (Niles et al. 2007) leading some researchers to suggest the population is highly vulnerable to extinction (Baker et al. 2004). The determination of regional population estimates and identification of major stopover sites are considered to be the highest priority for the Georgia Department of Natural Resources State Wildlife Action Plan (2015), the Atlantic Flyway Shorebird Business Strategy (Winn et al. 2013), the US Shorebird Plan (Brown et al. 2001), the USFWS Red Knot Spotlight Species Action Plan (2010), and the Western Hemisphere Shorebird Reserve Network (WHSRN) Red Knot Conservation Plan for the Western Hemisphere (Niles et al. 2010a). The Georgia Department of Natural Resources State Wildlife Action Plan ranks the Red Knot as a high priority species (with state status of “Rare”) and ranks research of the Red Knot as one of the primary conservation actions needed within the state. A band resight program was initiated along the Georgia coastal barrier islands during the fall of 2011 and spring of 2013 and 2015-2016 giving baseline information for those seasons (Lyons et al. 2017, Smith et al. 2017). A trapping and tagging project was initiated in South Carolina in recent years, though there has been no systematic resight effort within the state. The patterns observed in both studies suggest that Red Knots are using the south-Atlantic through Delaware Bay in spring as an open network of staging areas. Recent tagging results in South Carolina have documented direct spring flights from South Carolina to James Bay, suggesting that the south-Atlantic stopovers are more important in the life-cycle of shorebirds than is currently thought. It is currently unknown what percentage of Red Knots use the direct flight strategy vs. stopping in Delaware Bay on their northbound migration. Winter resighting work conducted in South Carolina suggests that virtually no Red Knots wintering along the south-Atlantic use Delaware Bay in spring migration. Although movement and settlement “decisions” are likely influenced by foraging conditions throughout the network, investigations into the factors driving movements during migration is necessary to better understand Red Knot migration ecology. This is critical in developing appropriate stopover models and adaptive management tools for land managers. The Georgia Department of Natural Resources, the South Carolina Department of Natural Resources, the US Fish and Wildlife Service, and The Center for Conservation Biology will initiate a Red Knot tagging and resighting program along the Atlantic Coast of Georgia during the spring of 2019 to be paired with the ongoing programs within Delaware Bay and elsewhere along the flyway. This project will provide critical data that will be used to analyze the ongoing questions regarding Red Knot habitat choice decision making in the south Atlantic Coast in spring. A large percentage (3-6%) of Red Knots have been previously captured and tagged with unique 2 to 3 digits alpha-numeric bands. This marked population allows for mark-resight studies of migratory populations of Red Knots with no capturing involved. A total of 27,356 Red Knots were detected during daily surveys in spring 2019 along the Georgia and South Carolina Coasts; of those, 4,917 were scanned for flags, and 315 individually banded Red Knots were resighted a total of 523 times from within the spring migrant population. A total of 71 marked to unmarked ratios were recorded during the field season, with an average of 3.6% of Red Knots individually marked over the course of the spring. The rough estimate for the total number of knots cycling through during the spring season is estimated superpopulation size for the spring 2019 season is 8,750 (3.6% of birds tagged and 315 individuals recorded). The Georgia Coast is a major stopover area annually for rufa Red Knots in spring migration and in certain years in fall migration. The superpopulation utilizing the coast in fall migration can exceed 23,000 birds (Lyons et al. 2017) and the rough estimate of spring migration superpopulation from this study is approximately 8,750 birds. The total estimated population of rufa Red Knots is 42,000 birds (Andres et al. 2012), suggesting that a high percentage of rufa knots are using the Georgia Coast in spring and in some years fall migration. There appears to be less variation in spring migration superpopulations between years than in fall migration, suggesting a more stable (but less abundant) food source for spring migrants

Regulation of Hepatic Triacylglycerol Metabolism by CGI-58 Does Not Require ATGL Co-activation

SummaryAdipose triglyceride lipase (ATGL) and comparative gene identification 58 (CGI-58) are critical regulators of triacylglycerol (TAG) turnover. CGI-58 is thought to regulate TAG mobilization by stimulating the enzymatic activity of ATGL. However, it is not known whether this coactivation function of CGI-58 occurs in vivo. Moreover, the phenotype of human CGI-58 mutations suggests ATGL-independent functions. Through direct comparison of mice with single or double deficiency of CGI-58 and ATGL, we show here that CGI-58 knockdown causes hepatic steatosis in both the presence and absence of ATGL. CGI-58 also regulates hepatic diacylglycerol (DAG) and inflammation in an ATGL-independent manner. Interestingly, ATGL deficiency, but not CGI-58 deficiency, results in suppression of the hepatic and adipose de novo lipogenic program. Collectively, these findings show that CGI-58 regulates hepatic neutral lipid storage and inflammation in the genetic absence of ATGL, demonstrating that mechanisms driving TAG lipolysis in hepatocytes differ significantly from those in adipocytes

String Phase in an Artificial Spin Ice

One-dimensional strings of local excitations are a fascinating feature of the physical behavior of strongly correlated topological quantum matter. Here we study strings of local excitations in a classical system of interacting nanomagnets, the Santa Fe Ice geometry of artificial spin ice. We measured the moment configuration of the nanomagnets, both after annealing near the ferromagnetic Curie point and in a thermally dynamic state. While the Santa Fe Ice lattice structure is complex, we demonstrate that its disordered magnetic state is naturally described within a framework of emergent strings. We show experimentally that the string length follows a simple Boltzmann distribution with an energy scale that is associated with the system's magnetic interactions and is consistent with theoretical predictions. The results demonstrate that string descriptions and associated topological characteristics are not unique to quantum models but can also provide a simplifying description of complex classical systems with non-trivial frustration

Entropy-driven order in an array of nanomagnets

Long-range ordering is typically associated with a decrease in entropy. Yet, it can also be driven by increasing entropy in certain special cases. Here we demonstrate that artificial spin-ice arrays of single-domain nanomagnets can be designed to produce such entropy-driven order. We focus on the tetris artificial spin-ice structure, a highly frustrated array geometry with a zero-point Pauling entropy, which is formed by selectively creating regular vacancies on the canonical square ice lattice. We probe thermally active tetris artificial spin ice both experimentally and through simulations, measuring the magnetic moments of the individual nanomagnets. We find two-dimensional magnetic ordering in one subset of these moments, which we demonstrate to be induced by disorder (that is, increased entropy) in another subset of the moments. In contrast with other entropy-driven systems, the discrete degrees of freedom in tetris artificial spin ice are binary and are both designable and directly observable at the microscale, and the entropy of the system is precisely calculable in simulations. This example, in which the system’s interactions and ground-state entropy are well defined, expands the experimental landscape for the study of entropy-driven ordering

Febrile illness diagnostics and the malaria-industrial complex: a socio-environmental perspective

Abstract Background Global prioritization of single-disease eradication programs over improvements to basic diagnostic capacity in the Global South have left the world unprepared for epidemics of chikungunya, Ebola, Zika, and whatever lies on the horizon. The medical establishment is slowly realizing that in many parts of sub-Saharan Africa (SSA), particularly urban areas, up to a third of patients suffering from acute fever do not receive a correct diagnosis of their infection. Main body Malaria is the most common diagnosis for febrile patients in low-resource health care settings, and malaria misdiagnosis has soared due to the institutionalization of malaria as the primary febrile illness of SSA by international development organizations and national malaria control programs. This has inadvertently created a “malaria-industrial complex” and historically obstructed our complete understanding of the continent’s complex communicable disease epidemiology, which is currently dominated by a mélange of undiagnosed febrile illnesses. We synthesize interdisciplinary literature from Ghana to highlight the complexity of communicable disease care in SSA from biomedical, social, and environmental perspectives, and suggest a way forward. Conclusion A socio-environmental approach to acute febrile illness etiology, diagnostics, and management would lead to substantial health gains in Africa, including more efficient malaria control. Such an approach would also improve global preparedness for future epidemics of emerging pathogens such as chikungunya, Ebola, and Zika, all of which originated in SSA with limited baseline understanding of their epidemiology despite clinical recognition of these viruses for many decades. Impending ACT resistance, new vaccine delays, and climate change all beckon our attention to proper diagnosis of fevers in order to maximize limited health care resources

Assessment of Brain Age in Posttraumatic Stress Disorder: Findings from the ENIGMA PTSD and Brain Age Working Groups

Background Posttraumatic stress disorder (PTSD) is associated with markers of accelerated aging. Estimates of brain age, compared to chronological age, may clarify the effects of PTSD on the brain and may inform treatment approaches targeting the neurobiology of aging in the context of PTSD. Method Adult subjects (N = 2229; 56.2% male) aged 18–69 years (mean = 35.6, SD = 11.0) from 21 ENIGMA-PGC PTSD sites underwent T1-weighted brain structural magnetic resonance imaging, and PTSD assessment (PTSD+, n = 884). Previously trained voxel-wise (brainageR) and region-of-interest (BARACUS and PHOTON) machine learning pipelines were compared in a subset of control subjects (n = 386). Linear mixed effects models were conducted in the full sample (those with and without PTSD) to examine the effect of PTSD on brain predicted age difference (brain PAD; brain age − chronological age) controlling for chronological age, sex, and scan site. Results BrainageR most accurately predicted brain age in a subset (n = 386) of controls (brainageR: ICC = 0.71, R = 0.72, MAE = 5.68; PHOTON: ICC = 0.61, R = 0.62, MAE = 6.37; BARACUS: ICC = 0.47, R = 0.64, MAE = 8.80). Using brainageR, a three-way interaction revealed that young males with PTSD exhibited higher brain PAD relative to male controls in young and old age groups; old males with PTSD exhibited lower brain PAD compared to male controls of all ages. Discussion Differential impact of PTSD on brain PAD in younger versus older males may indicate a critical window when PTSD impacts brain aging, followed by age-related brain changes that are consonant with individuals without PTSD. Future longitudinal research is warranted to understand how PTSD impacts brain aging across the lifespan

Linking soil microbial community structure to potential carbon mineralization: A continental scale assessment of reduced tillage

Potential carbon mineralization (Cmin) is a commonly used indicator of soil health, with greater Cmin values interpreted as healthier soil. While Cmin values are typically greater in agricultural soils managed with minimal physical disturbance, the mechanisms driving the increases remain poorly understood. This study assessed bacterial and archaeal community structure and potential microbial drivers of Cmin in soils maintained under various degrees of physical disturbance. Potential carbon mineralization, 16S rRNA sequences, and soil characterization data were collected as part of the North American Project to Evaluate Soil Health Measurements (NAPESHM). Results showed that type of cropping system, intensity of physical disturbance, and soil pH influenced microbial sensitivity to physical disturbance. Furthermore, 28% of amplicon sequence variants (ASVs), which were important in modeling Cmin, were enriched under soils managed with minimal physical disturbance. Sequences identified as enriched under minimal disturbance and important for modeling Cmin, were linked to organisms which could produce extracellular polymeric substances and contained metabolic strategies suited for tolerating environmental stressors. Understanding how physical disturbance shapes microbial communities across climates and inherent soil properties and drives changes in Cmin provides the context necessary to evaluate management impacts on standardized measures of soil microbial activity

Carbon-sensitive pedotransfer functions for plant available water

Currently accepted pedotransfer functions show negligible effect of management-induced changes to soil organic carbon (SOC) on plant available water holding capacity (θAWHC), while some studies show the ability to substantially increase θAWHC through management. The Soil Health Institute\u27s North America Project to Evaluate Soil Health Measurements measured water content at field capacity using intact soil cores across 124 long-term research sites that contained increases in SOC as a result of management treatments such as reduced tillage and cover cropping. Pedotransfer functions were created for volumetric water content at field capacity (θFC) and permanent wilting point (θPWP). New pedotransfer functions had predictions of θAWHC that were similarly accurate compared with Saxton and Rawls when tested on samples from the National Soil Characterization database. Further, the new pedotransfer functions showed substantial effects of soil calcareousness and SOC on θAWHC. For an increase in SOC of 10 g kg–1 (1%) in noncalcareous soils, an average increase in θAWHC of 3.0 mm 100 mm–1 soil (0.03 m3 m–3) on average across all soil texture classes was found. This SOC related increase in θAWHC is about double previous estimates. Calcareous soils had an increase in θAWHC of 1.2 mm 100 mm–1 soil associated with a 10 g kg–1 increase in SOC, across all soil texture classes. New equations can aid in quantifying benefits of soil management practices that increase SOC and can be used to model the effect of changes in management on drought resilience