On the trophic fate of Phaeocystis pouchetii: VII. Sterols and fatty acids reveal sedimentation of Phaocystis-derived organic matter via krill fecal strings

As part of a joint project on the fate of phytoplankton in Balsfjorden in Northern Norway, we investigated the trophic fate and sedimentation potential of Phaeocystis pouchetii by tracing the transition of biomarker patterns from a phytoplankton bloom to sediment traps and during a gut passage experiment. The phytoplankton biomass during the spring bloom 1996 was dominated by colonial P. pouchetii (ca. 85 %) and four members of the diatom family Thalassiosiraceae (ca. 10%). Particulate organic carbon in sediment traps largely consisted of fecal material from the Arctic krill Thysanoessa sp.. Sterol and fatty acid biomarker patterns in the phytoplankton bloom could be reproduced by combining the individual biomarker patterns of the isolated phytoplankters P. pouchetii and Thalassiosira decipiens in a ratio of ca. 75:25. In a laboratory experiment, Arctic krill (Thysanoessa raschii) fed with similar efficiency on Phaeocystis colonies and the Thalassiosiraceae. During gut passage, the abundance of Thalassiosiraceae biomarkers in fecal strings increased relative to Phaeocystis biomarkers, while biomarkers from krill became dominant. This transition of biomarker patterns due to gut passage in T. raschii closely resembled the biomarker transition from the surface bloom to material in sediment traps at 40-170 m depth, which was mainly composed of krill fecal strings. We conclude that krill grazed efficiently on Phaeocystis colonies in Balsfjorden, and caused sedimentation of Phaeocystis-derived organic matter below the euphotic zone via fecal strings. Hence, both transfer to higher trophic levels and sedimentation of Phaeocystis-derived organic matter can be more effective than commonly believed

Insights into Tikhonov regularization: application to trace gas column retrieval and the efficient calculation of total column averaging kernels

Insights are given into Tikhonov regularization and its application to the retrieval of vertical column densities of atmospheric trace gases from remote sensing measurements. The study builds upon the equivalence of the least-squares profile-scaling approach and Tikhonov regularization method of the first kind with an infinite regularization strength. Here, the vertical profile is expressed relative to a reference profile. On the basis of this, we propose a new algorithm as an extension of the least-squares profile scaling which permits the calculation of total column averaging kernels on arbitrary vertical grids using an analytic expression. Moreover, we discuss the effective null space of the retrieval, which comprises those parts of a vertical trace gas distribution which cannot be inferred from the measurements. Numerically the algorithm can be implemented in a robust and efficient manner. In particular for operational data processing with challenging demands on processing time, the proposed inversion method in combination with highly efficient forward models is an asset. For demonstration purposes, we apply the algorithm to CO column retrieval from simulated measurements in the 2.3 μm spectral region and to O₃ column retrieval from the UV. These represent ideal measurements of a series of spaceborne spectrometers such as SCIAMACHY, TROPOMI, GOME, and GOME-2. For both spectral ranges, we consider clear-sky and cloudy scenes where clouds are modelled as an elevated Lambertian surface. Here, the smoothing error for the clear-sky and cloudy atmosphere is significant and reaches several percent, depending on the reference profile which is used for scaling. This underlines the importance of the column averaging kernel for a proper interpretation of retrieved column densities. Furthermore, we show that the smoothing due to regularization can be underestimated by calculating the column averaging kernel on a too coarse vertical grid. For both retrievals, this effect becomes negligible for a vertical grid with 20–40 equally thick layers between 0 and 50 km

Structure and stability of graphene nanoribbons in oxygen, carbon dioxide, water, and ammonia

We determine, by means of density functional theory, the stability and the structure of graphene nanoribbon (GNR) edges in presence of molecules such as oxygen, water, ammonia, and carbon dioxide. As in the case of hydrogen-terminated nanoribbons, we find that the most stable armchair and zigzag configurations are characterized by a non-metallic/non-magnetic nature, and are compatible with Clar's sextet rules, well known in organic chemistry. In particular, we predict that, at thermodynamic equilibrium, neutral GNRs in oxygen-rich atmosphere should preferentially be along the armchair direction, while water-saturated GNRs should present zigzag edges. Our results promise to be particularly useful to GNRs synthesis, since the most recent and advanced experimental routes are most effective in water and/or ammonia-containing solutions.Comment: accepted for publication in PR

Structure, Stability, Edge States and Aromaticity of Graphene Ribbons

We determine the stability, the geometry, the electronic and magnetic structure of hydrogen-terminated graphene-nanoribbons edges as a function of the hydrogen content of the environment by means of density functional theory. Antiferromagnetic zigzag ribbons are stable only at extremely-low ultra-vacuum pressures. Under more standard conditions, the most stable structures are the mono- and di-hydrogenated armchair edges and a zigzag edge reconstruction with one di- and two mono-hydrogenated sites. At high hydrogen-concentration ``bulk'' graphene is not stable and spontaneously breaks to form ribbons, in analogy to the spontaneous breaking of graphene into small-width nanoribbons observed experimentally in solution. The stability and the existence of exotic edge electronic-states and/or magnetism is rationalized in terms of simple concepts from organic chemistry (Clar's rule)Comment: 4 pages, 3 figures, accepted for publication by Physical Review Letter

Appearance of Flat Bands and Edge States in Boron-Carbon-Nitride Nanoribbons

Presence of flat bands and edge states at the Fermi level in graphene nanoribbons with zigzag edges is one of the most interesting and attracting properties of nanocarbon materials but it is believed that they are quite fragile states and disappear when B and N atoms are doped at around the edges. In this paper, we theoretically investigate electronic and magnetic properties of boron-carbon-nitride (BCN) nanoribbons with zigzag edges where the outermost C atoms on the edges are alternately replaced with B and N atoms using the first principles calculations. We show that BCN nanoribbons have the flat bands and edge states at the Fermi level in both H_2 rich and poor environments. The flat bands are similar to those at graphene nanoribbons with zigzag edges, but the distributions of charge and spin densities are different between them. A tight binding model and the Hubbard model analysis show that the difference in the distribution of charge and spin densities is caused by the different site energies of B and N atoms compared with C atoms.Comment: 5 pages; 3 figure

Potential of alternate wetting and drying irrigation practices for the mitigation of ghg emissions from rice fields: Two cases in central luzon (philippines)

Reducing methane (CH$_{4}$) emission from paddy rice production is an important target for many Asian countries in order to comply with their climate policy commitments. National greenhouse gas (GHG) inventory approaches like the Tier-2 approach of the Intergovernmental Panel on Climate Change (IPCC) are useful to assess country-scale emissions from the agricultural sector. In paddy rice, alternate wetting and drying (AWD) is a promising and well-studied water management technique which, as shown in experimental studies, can effectively reduce CH$_{4}$) emissions. However, so far little is known about GHG emission rates under AWD when the technique is fully controlled by farmers. This study assesses CH$_{4}$) and nitrous oxide (N$_{2}$)O) fluxes under continuous flooded (CF) and AWD treatments for seven subsequent seasons on farmers’ fields in a pumped irrigation system in Central Luzon, Philippines. Under AWD management, CH$_{4}$) emissions were substantially reduced (73% in dry season (DS), 21% in wet season (WS)). In all treatments, CH$_{4}$) is the major contributor to the total GHG emission and is, thus, identified as the driving force to the global warming potential (GWP). The contribution of N$_{2}$)O emissions to the GWP was higher in CF than in AWD, however, these only offset 15% of the decrease in CH$_{4}$) emission and, therefore, did not jeopardize the strong reduction in the GWP. The study proves the feasibility of AWD under farmers’ management as well as the intended mitigation effect. Resulting from this study, it is recommended to incentivize dissemination strategies in order to improve the effectiveness of mitigation initiatives. A comparison of single CH$_{4}$) emissions to calculated emissions with the IPCC Tier-2 inventory approach identified that, although averaged values showed a sufficient degree of accuracy, fluctuations for single measurement points have high variation which limit the use of the method for field-level assessments

Climate-Based Suitability Assessment for Methane Mitigation by Water Saving Technology in Paddy Fields of the Central Plain of Thailand

The alternate wetting and drying (AWD) water management technique has been identified as one of the most promising options for mitigating methane (CH$_{4}$) emissions from rice cultivation. By its nature, however, this option is limited only to paddy fields where farmers have sustained access to irrigation water. In addition, large amounts of rainfall often make it difficult to drain water from paddy fields. Therefore, it is necessary to understand the specific conditions and suitability of an area in which AWD is foreseen to be applied before its CH$_{4}$ mitigation potential can be assessed in view of planning regional and national mitigation actions. In this study, we applied a methodology developed for assessing the climatic suitability of AWD to paddy fields in the central plain of Thailand in order to determine the potential spatial and temporal boundaries given by climatic and soil parameters that could impact on the applicability of AWD. Related to this, we also assessed the CH$_{4}$ mitigation potential in the target provinces. Results showed that the entire area of the six target provinces was climatically suitable for AWD in both the major (wet) and second (dry) rice seasons. A sensitivity analysis accounting for uncertainties in soil percolation and suitability classification indicated that these settings did not affect the results of the suitability assessment, although they changed to some extent the distribution of moderate and high climatic suitability areas in the major rice season. Following the methodologies of the Intergovernmental Panel on Climate Change Guidelines, we estimated that the AWD scenario could reduce annual CH$_{4}$ emissions by 32% compared with the emissions in the baseline (continuously flooded) scenario. The potential of AWD for annual CH$_{4}$ emission reduction was estimated to be 57,600 t CH$_{4}$ year$^{-1}$, equivalent to 1.61 Mt CO$_{2}$-eq year$^{-1}$, in the target provinces. However, we recognize the possibility that other parameters not included in our current approach may significantly influence the suitability of AWD and thus propose areas for further improvement derived from these limitations. All in all, our results will be instrumental in guiding practitioners at all levels involved in water management for rice cultivation

Experimentally Engineering the Edge Termination of Graphene Nanoribbons

The edges of graphene nanoribbons (GNRs) have attracted much interest due to their potentially strong influence on GNR electronic and magnetic properties. Here we report the ability to engineer the microscopic edge termination of high quality GNRs via hydrogen plasma etching. Using a combination of high-resolution scanning tunneling microscopy and first-principles calculations, we have determined the exact atomic structure of plasma-etched GNR edges and established the chemical nature of terminating functional groups for zigzag, armchair and chiral edge orientations. We find that the edges of hydrogen-plasma-etched GNRs are generally flat, free of structural reconstructions and are terminated by hydrogen atoms with no rehybridization of the outermost carbon edge atoms. Both zigzag and chiral edges show the presence of edge states.Comment: 16+9 pages, 3+4 figure

Gender Differences in Climate Change Perception and Adaptation Strategies: The Case of Three Provinces in Vietnam’s Mekong River Delta

The Policy Information and Response Platform on Climate Change and Rice in ASEAN and its Member Countries Project (PIRCCA) is one of the trial projects funded under Flagship 4. PIRCCA has an overarching goal to enable policymakers in ASEAN countries to make informed decisions on (1) food security policies focusing on the supply and availability of rice, (2) climate change adaptation policies, and (3) gender action plans

Methane emission factors from vietnamese rice production: Pooling data of 36 field sites for meta-analysis

Rice production is a significant source of greenhouse gas (GHG) emissions in the national budget of many Asian countries, but the extent of emissions varies strongly across agro-environmental zones. It is important to understand these differences in order to improve the national GHG inventory and effectively target mitigation options. This study presents a meta-analysis of CH4 database emission factors (EFs) from 36 field sites across the rice growing areas of Vietnam and covering 73 cropping seasons. The EFs were developed from field measurements using the closed chamber technique. The analysis for calculating baseline EFs in North, Central and South Vietnam in line with the Intergovernmental Panel on Climate Change (IPCC) Tier 2 methodology was specified for the three cropping seasons being early-(E), mid-(M) and late-year (L) seasons. Calculated average CH$_{4}$ EFs are given in kg ha$^{-1}$ d$^{-1}$ and reflect the distinct seasons in North (E: 2.21; L: 3.89), Central (E: 2.84; M+L: 3.13) and South Vietnam (E: 1.72; M: 2.80; L: 3.58). Derived from the available data of the edapho-hydrological zones of the Mekong River Delta, season-based EFs are more useful than zone-based EFs. In totality, these average EFs indicate an enormous variability of GHG emissions in Vietnamese rice production and represent much higher values than the IPCC default. Seasonal EFs from Vietnam exceeded IPCC defaults given for Southeast Asia corresponding to 160% (E), 240% (M) and 290% (L) of the medium value, respectively