The water balance of a seasonal stream in the semi-arid Western Cape (South Africa)

A detailed water balance and conceptual flow model was calculated and developed for the Sandspruit catchment for the period 1990 to 2010 on a winter rainfall water-year (1 April - 31 March) basis. The Sandspruit catchment (quaternary catchment G10J) is located in the Western Cape Province of South Africa and is a tributary of the Berg River. It contributes significantly to the salinisation of the mid- to lower-reaches of the Berg River and thus the hydrological drivers need to be quantified and conceptualised in order to develop salinity management strategies. Various components of the water balance, i.e. precipitation, evaporation, streamflow, recharge, etc., were monitored and quantified. In addition, stable environmental isotopes and water balance modelling were used to perform hydrograph separation as well as to quantify components of the water balance. Annual streamflow in the catchment during the period of observation was variable, ranging between 0.026 mm·a-1 and 75.401 mm·a-1. Streamflow volumes also exhibit high variability between water years. Catchment annual rainfall varied between 351 and 655 mm·a-1, averaging at 473 mm·a-1. On average, 6.5% of rainfall was converted to streamflow during the period of observation. Evapotranspiration was found to be the dominant component of the water balance, as it comprises, on average, 94% of precipitation in the catchment. Groundwater recharge was calculated to average at 29 mm·a-1. The water balance model (J2000) performed well during the simulation period with all measures of performance exhibiting acceptable values. Simulation results indicate that streamflow is driven by interflow from the soil horizon (94.68% of streamflow), followed by overland flow (4.92% of streamflow). These results, together with the physiographic conditions evident in the catchment, were used to develop a conceptual flow model. Streamflow is interpreted to be driven by quickflow, i.e. overland flow and interflow, with minimal contribution from groundwater, and is also more dependent on the rainfall distribution in time rather than on the annual volume. The correlation between average annual streamflow and average rainfall was observed to be poor, suggesting that alternative factors, e.g. the spatial distribution of winter wheat, the temporal distribution of rainfall, climatic variables (temperature), etc., exert a greater influence on streamflow. The water balance and conceptual flow model will form the basis for the application of distributed hydrological modelling in the Sandspruit catchment and the development of salinity management strategies. Results from this investigation, e.g. ET estimates, methods to quantify groundwater recharge, hydrograph separation, etc., could potentially be extrapolated to other semi-arid areas

Salinity guidelines for irrigation: Case studies from Water Research Commission projects along the Lower Vaal, Riet, Berg and Breede Rivers

A vast number of projects on salinity in irrigated agriculture were funded by the Water Research Commission (WRC) during the past 40 years. However, due to the diversity of the projects it is virtually impossible to cover all  aspects thoroughly in a paper of limited length. Thus this review focuses mainly on projects along the Lower Vaal, Riet, Berg and Breede Rivers in South Africa. The results on the water quality of these rivers indicate that irrigation has led to the deterioration of water sources. There is a direct relationship between river water quality and soils irrigated. Fortunately, effective land-suitability guidelines were developed and applied during the establishment of the major irrigation schemes. This facilitated the management of soils under irrigation. The results from long-term irrigation case studies along the Lower Vaal River and Breede River show that the quality of soils can be improved. The opposite is also true where mismanagement occurred. Research on the salinity threshold of major crops (grapevines, wheat, maize, groundnuts, etc.) confirmed the empiric nature of the guidelines. It is suggested that a more dynamic approach be used for managing salinity under irrigation at farm level, i.e. the use of models. Amongst others, future research should focus on determining the spatial and temporal distribution of salt in irrigated soils.Keywords: crop response, electrical conductivity, sodium adsorption ratio, soil type, water qualit

Total evaporation estimates from a Renosterveld and dryland wheat/fallow surface at the Voëlvlei Nature Reserve (South Africa)

Accurate quantification of the water balance, in particular evapotranspiration, is fundamental in managing water resources, especially in semi-arid areas. The objective of this study was to compare evaporation from endemic vegetation – Renosterveld – and a dryland wheat/fallow cropping system. The study was carried out in the mid-reaches of the Berg River catchment (South Africa), characterised by dryland salinity. Measurements of total evaporation from these 2 land uses were carried out with large aperture scintillometers during window periods from 2005 to 2007. Total evaporation was measured to be higher in Renosterveld than in wheat during the rainy winter season. In the dry summer season, total evaporation from Renosterveld was limited by soil water supply, and vegetation was under water stress. Spatial variability of total evaporation from both wheat/fallow land and Renosterveld was estimated using the Surface Energy Balance Algorithm for Land (SEBAL) model for 3 climatically different years. The scintillometer measurements were used to determine basal crop coefficients for long-term (20 years) simulations with the HYDRUS-1D model to assess temporal variability in total evaporation. Long-term simulations indicated that well-established, deep-rooted Renosterveld uses 39% more water than the shallowrooted wheat/fallow system. A change in land use from Renosterveld to dryland annual crops could therefore affect the soil water balance, cause shallow saline groundwater tables and degradation of soil and water resources.Keywords: evapotranspiration; large aperture scintillometer; Renosterveld; soil water balance; Surface Energy Balance Algorithm for Land (SEBAL); wheat/fallow syste

Towards computerizing intensive care sedation guidelines: design of a rule-based architecture for automated execution of clinical guidelines

<p>Abstract</p> <p>Background</p> <p>Computerized ICUs rely on software services to convey the medical condition of their patients as well as assisting the staff in taking treatment decisions. Such services are useful for following clinical guidelines quickly and accurately. However, the development of services is often time-consuming and error-prone. Consequently, many care-related activities are still conducted based on manually constructed guidelines. These are often ambiguous, which leads to unnecessary variations in treatments and costs.</p> <p>The goal of this paper is to present a semi-automatic verification and translation framework capable of turning manually constructed diagrams into ready-to-use programs. This framework combines the strengths of the manual and service-oriented approaches while decreasing their disadvantages. The aim is to close the gap in communication between the IT and the medical domain. This leads to a less time-consuming and error-prone development phase and a shorter clinical evaluation phase.</p> <p>Methods</p> <p>A framework is proposed that semi-automatically translates a clinical guideline, expressed as an XML-based flow chart, into a Drools Rule Flow by employing semantic technologies such as ontologies and SWRL. An overview of the architecture is given and all the technology choices are thoroughly motivated. Finally, it is shown how this framework can be integrated into a service-oriented architecture (SOA).</p> <p>Results</p> <p>The applicability of the Drools Rule language to express clinical guidelines is evaluated by translating an example guideline, namely the sedation protocol used for the anaesthetization of patients, to a Drools Rule Flow and executing and deploying this Rule-based application as a part of a SOA. The results show that the performance of Drools is comparable to other technologies such as Web Services and increases with the number of decision nodes present in the Rule Flow. Most delays are introduced by loading the Rule Flows.</p> <p>Conclusions</p> <p>The framework is an effective solution for computerizing clinical guidelines as it allows for quick development, evaluation and human-readable visualization of the Rules and has a good performance. By monitoring the parameters of the patient to automatically detect exceptional situations and problems and by notifying the medical staff of tasks that need to be performed, the computerized sedation guideline improves the execution of the guideline.</p

Evolution and Phylogenetic Analysis of Full-Length VP3 Genes of Eastern Mediterranean Bluetongue Virus Isolates

Bluetongue virus (BTV) is the ‘type’ species of the genus Orbivirus within the family Reoviridae. The BTV genome is composed of ten linear segments of double-stranded RNA (dsRNA), each of which codes for one of ten distinct viral proteins. Previous phylogenetic comparisons have evaluated variations in genome segment 3 (Seg-3) nucleotide sequence as way to identify the geographical origin (different topotypes) of BTV isolates. The full-length nucleotide sequence of genome Seg-3 was determined for thirty BTV isolates recovered in the eastern Mediterranean region, the Balkans and other geographic areas (Spain, India, Malaysia and Africa). These data were compared, based on molecular variability, positive-selection-analysis and maximum-likelihood phylogenetic reconstructions (using appropriate substitution models) to 24 previously published sequences, revealing their evolutionary relationships. These analyses indicate that negative selection is a major force in the evolution of BTV, restricting nucleotide variability, reducing the evolutionary rate of Seg-3 and potentially of other regions of the BTV genome. Phylogenetic analysis of the BTV-4 strains isolated over a relatively long time interval (1979–2000), in a single geographic area (Greece), showed a low level of nucleotide diversity, indicating that the virus can circulate almost unchanged for many years. These analyses also show that the recent incursions into south-eastern Europe were caused by BTV strains belonging to two different major-lineages: representing an ‘eastern’ (BTV-9, -16 and -1) and a ‘western’ (BTV-4) group/topotype. Epidemiological and phylogenetic analyses indicate that these viruses originated from a geographic area to the east and southeast of Greece (including Cyprus and the Middle East), which appears to represent an important ecological niche for the virus that is likely to represent a continuing source of future BTV incursions into Europe

Defensive responses by a social caterpillar are tailored to different predators and change with larval instar and group size

Gregariousness in animals is widely accepted as a behavioral adaptation for protection from predation. However, predation risk and the effectiveness of a prey’s defense can be a function of several other factors, including predator species and prey size or age. The objective of this study was to determine if the gregarious habit of Malacosoma disstria caterpillars is advantageous against invertebrate natural enemies, and whether it is through dilution or cooperative defenses. We also examined the effects of larval growth and group size on the rate and success of attacks. Caterpillars of M. disstria responded with predator-specific behaviors, which led to increased survival. Evasive behaviors were used against stinkbugs, while thrashing by fourth instar caterpillars and holding on to the silk mat by second instar caterpillars was most efficient against spider attacks. Collective head flicking and biting by groups of both second and fourth instar caterpillars were observed when attacked by parasitoids. Increased larval size decreased the average number of attacks by spiders but increased the number of attacks by both stinkbugs and parasitoids. However, increased body size decreased the success rate of attacks by all three natural enemies and increased handling time for both predators. Larger group sizes did not influence the number of attacks from predators but increased the number of attacks and the number of successful attacks from parasitoids. In all cases, individual risk was lower in larger groups. Caterpillars showed collective defenses against parasitoids but not against the walking predators. These results show that caterpillars use different tactics against different natural enemies. Overall, these tactics are both more diverse and more effective in fourth instar than in second instar caterpillars, confirming that growth reduces predation risk. We also show that grouping benefits caterpillars through dilution of risk, and, in the case of parasitoids, through group defenses. The decreased tendency to aggregate in the last larval instar may therefore be linked to decreasing predation risk

Mapping the soil water infiltration characteristics of a small catchment based on the sediment character of the topsoil samples

AgriwetenskappeGrondkundePlease help us populate SUNScholar with the post print version of this article. It can be e-mailed to: [email protected]

Space-time variability of soil salinity in irrigated soils of South Africa.

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The Berg River basin dryland salinity and landuse.

AgriwetenskappeGrondkundePlease help us populate SUNScholar with the post print version of this article. It can be e-mailed to: [email protected]