671 research outputs found

    Field Testing of Nano-PCM Enhanced Building Envelope Components

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    The U.S. Department of Energy s (DOE) Building Technologies Program s goal of developing high-performance, energy efficient buildings will require more cost-effective, durable, energy efficient building envelopes. Forty-eight percent of the residential end-use energy consumption is spent on space heating and air conditioning. Reducing envelope-generated heating and cooling loads through application of phase change material (PCM)-enhanced envelope components can facilitate maximizing the energy efficiency of buildings. Field-testing of prototype envelope components is an important step in estimating their energy benefits. An innovative phase change material (nano-PCM) was developed with PCM encapsulated with expanded graphite (interconnected) nanosheets, which is highly conducive for enhanced thermal storage and energy distribution, and is shape-stable for convenient incorporation into lightweight building components. During 2012, two test walls with cellulose cavity insulation and prototype PCM-enhanced interior wallboards were installed in a natural exposure test (NET) facility at Charleston, SC. The first test wall was divided into four sections, which were separated by wood studs and thin layers of foam insulation. Two sections contained nano-PCM-enhanced wallboards: one was a three-layer structure, in which nano-PCM was sandwiched between two gypsum boards, and the other one had PCM dispersed homogeneously throughout graphite nanosheets-enhanced gypsum board. The second test wall also contained two sections with interior PCM wallboards; one contained nano-PCM dispersed homogeneously in gypsum and the other was gypsum board containing a commercial microencapsulated PCM (MEPCM) for comparison. Each test wall contained a section covered with gypsum board on the interior side, which served as control or a baseline for evaluation of the PCM wallboards. The walls were instrumented with arrays of thermocouples and heat flux transducers. Further, numerical modeling of the walls containing the nano-PCM wallboards were performed to determine their actual impact on wall-generated heating and cooling loads. The models were first validated using field data, and then used to perform annual simulations using Typical Meteorological Year (TMY) weather data. This article presents the measured performance and numerical analysis to evaluate the energy-saving potential of the nano-PCM-enhanced building components

    Neural Processing of Emotional Musical and Nonmusical Stimuli in Depression

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    Background Anterior cingulate cortex (ACC) and striatum are part of the emotional neural circuitry implicated in major depressive disorder (MDD). Music is often used for emotion regulation, and pleasurable music listening activates the dopaminergic system in the brain, including the ACC. The present study uses functional MRI (fMRI) and an emotional nonmusical and musical stimuli paradigm to examine how neural processing of emotionally provocative auditory stimuli is altered within the ACC and striatum in depression. Method Nineteen MDD and 20 never-depressed (ND) control participants listened to standardized positive and negative emotional musical and nonmusical stimuli during fMRI scanning and gave subjective ratings of valence and arousal following scanning. Results ND participants exhibited greater activation to positive versus negative stimuli in ventral ACC. When compared with ND participants, MDD participants showed a different pattern of activation in ACC. In the rostral part of the ACC, ND participants showed greater activation for positive information, while MDD participants showed greater activation to negative information. In dorsal ACC, the pattern of activation distinguished between the types of stimuli, with ND participants showing greater activation to music compared to nonmusical stimuli, while MDD participants showed greater activation to nonmusical stimuli, with the greatest response to negative nonmusical stimuli. No group differences were found in striatum. Conclusions These results suggest that people with depression may process emotional auditory stimuli differently based on both the type of stimulation and the emotional content of that stimulation. This raises the possibility that music may be useful in retraining ACC function, potentially leading to more effective and targeted treatments

    Effects from the Reduction of Air Leakage on Energy and Durability

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    Protein Sequence Alignment Analysis by Local Covariation: Coevolution Statistics Detect Benchmark Alignment Errors

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    The use of sequence alignments to understand protein families is ubiquitous in molecular biology. High quality alignments are difficult to build and protein alignment remains one of the largest open problems in computational biology. Misalignments can lead to inferential errors about protein structure, folding, function, phylogeny, and residue importance. Identifying alignment errors is difficult because alignments are built and validated on the same primary criteria: sequence conservation. Local covariation identifies systematic misalignments and is independent of conservation. We demonstrate an alignment curation tool, LoCo, that integrates local covariation scores with the Jalview alignment editor. Using LoCo, we illustrate how local covariation is capable of identifying alignment errors due to the reduction of positional independence in the region of misalignment. We highlight three alignments from the benchmark database, BAliBASE 3, that contain regions of high local covariation, and investigate the causes to illustrate these types of scenarios. Two alignments contain sequential and structural shifts that cause elevated local covariation. Realignment of these misaligned segments reduces local covariation; these alternative alignments are supported with structural evidence. We also show that local covariation identifies active site residues in a validated alignment of paralogous structures. Loco is available at https://sourceforge.net/projects/locoprotein/files

    Background frequencies for residue variability estimates: BLOSUM revisited

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    <p>Abstract</p> <p>Background</p> <p>Shannon entropy applied to columns of multiple sequence alignments as a score of residue conservation has proven one of the most fruitful ideas in bioinformatics. This straightforward and intuitively appealing measure clearly shows the regions of a protein under increased evolutionary pressure, highlighting their functional importance. The inability of the column entropy to differentiate between residue types, however, limits its resolution power.</p> <p>Results</p> <p>In this work we suggest generalizing Shannon's expression to a function with similar mathematical properties, that, at the same time, includes observed propensities of residue types to mutate to each other. To do that, we revisit the original construction of BLOSUM matrices, and re-interpret them as mutation probability matrices. These probabilities are then used as background frequencies in the revised residue conservation measure.</p> <p>Conclusion</p> <p>We show that joint entropy with BLOSUM-proportional probabilities as a reference distribution enables detection of protein functional sites comparable in quality to a time-costly maximum-likelihood evolution simulation method (rate4site), and offers greater resolution than the Shannon entropy alone, in particular in the cases when the available sequences are of narrow evolutionary scope.</p
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