The Apical Ventricular Lesion In Chagas' Heart Disease.

Apical lesions of the left ventricle, ranging from endocardial thickening to aneurysms, are commonly found in Chagas' heart disease. These abnormalities can be identified by ventriculography, two-dimensional echocardiography and radioisotopic studies. Generally, clinical manifestations are limited to arrhythmias and thromboembolic. The lesions are usually small and apparently do not play a role in ventricular dysfunction.113278579

ngsLD: evaluating linkage disequilibrium using genotype likelihoods

MOTIVATION: Linkage disequilibrium measures the correlation between genetic loci and is highly informative for association mapping and population genetics. As many studies rely on called genotypes for estimating linkage disequilibrium, their results can be affected by data uncertainty, especially when employing a low read depth sequencing strategy. Furthermore, there is a manifest lack of tools for the analysis of large-scale, low-depth and short-read sequencing data from non-model organisms with limited sample sizes. RESULTS: ngsLD addresses these issues by estimating linkage disequilibrium directly from genotype likelihoods in a fast, reliable and user-friendly implementation. This method makes use of the full information available from sequencing data and provides accurate estimates of linkage disequilibrium patterns compared to approaches based on genotype calling. We conducted a case study to investigate how linkage disequilibrium decays over physical distance in two avian species. AVAILABILITY: The methods presented in this work were implemented in C/C and are freely available for non-commercial use from https://github.com/fgvieira/ngsLD

The DNA damage response is developmentally regulated in the African trypanosome

Genomes are affected by a wide range of damage, which has resulted in the evolution of a number of widely conserved DNA repair pathways. Most of these repair reactions have been described in the African trypanosome Trypanosoma brucei, which is a genetically tractable eukaryotic microbe and important human and animal parasite, but little work has considered how the DNA damage response operates throughout the T. brucei life cycle. Using quantitative PCR we have assessed damage induction and repair in both the nuclear and mitochondrial genomes of the parasite. We show differing kinetics of repair for three forms of DNA damage, and dramatic differences in repair between replicative life cycle forms found in the testse fly midgut and the mammal. We find that mammal-infective T. brucei cells repair oxidative and crosslink-induced DNA damage more efficiently than tsetse-infective cells and, moreover, very distinct patterns of induction and repair of DNA alkylating damage in the two life cycle forms. We also reveal robust repair of DNA lesions in the highly unusual T. brucei mitochondrial genome (the kinetoplast). By examining mutants we show that nuclear alkylation damage is repaired by the concerted action of two repair pathways, and that Rad51 acts in kinetoplast repair. Finally, we correlate repair with cell cycle arrest and cell growth, revealing that induced DNA damage has strikingly differing effects on the two life cycle stages, with distinct timing of alkylation-induced cell cycle arrest and higher levels of damage induced death in mammal-infective cells. Our data reveal that T. brucei regulates the DNA damage response during its life cycle, a capacity that may be shared by many microbial pathogens that exist in variant environments during growth and transmission

Soil organisms in organic and conventional cropping systems.

Apesar do crescente interesse pela agricultura orgânica, são poucas as informações de pesquisa disponíveis sobre o assunto. Assim, num Argissolo Vermelho-Amarelo distrófico foram comparados os efeitos de sistemas de cultivo orgânico e convencional, para as culturas do tomate (Lycopersicum esculentum) e do milho (Zea mays), sobre a comunidade de organismos do solo e suas atividades. As populações de fungos,bactérias e actinomicetos, determinadas pela contagem de colônias em meio de cultura, foram semelhantes para os dois sistemas de produção. A atividade microbiana, avaliada pela evolução de CO2, manteve-se superior no sistema orgânico, sendo que em determinadas avaliações foi o dobro da evolução verificada no sistema convencional. O número de espécimes de minhoca foi praticamente dez vezes maior no sistema orgânico. Não foi observada diferença na taxa de decomposição de matéria orgânica entre os dois sistemas. De modo geral, o número de indivíduos de microartrópodos foi superior no sistema orgânico do que no sistema convencional, refletindo no maior índice de diversidade de Shannon. As maiores populações de insetos foram as da ordem Collembola, enquanto para os ácaros a maior população foi a da superfamília Oribatuloidea. Indivíduos dos grupos Aranae, Chilopoda, Dyplopoda, Pauropoda, Protura e Symphyla foram ocasionalmente coletados e de forma similar entre os sistemas

Essential oil from Ageratum fastigiatum reduces expression of the pro-inflammatory cytokine tumor necrosis factor-alpha in peripheral blood leukocytes subjected to in vitro stimulation with phorbol myristate acetate

AbstractAgeratum fastigiatum (Gardner) R.M. King & H. Rob., a member of the Asteraceae family popularly known in Brazil as “matapasto”, is indicated in folk medicine as anti-inflammatory and analgesic. Despite its popular use, little is known about its potential effect on the parameters involved in an inflammatory response. The objective of this study was to characterize the chemical composition of the essential oil from A. fastigiatum and to evaluate the frequency of tumor necrosis factor alpha and interferon gamma producing cells in peripheral blood lymphocytes stimulated with phorbol myristate acetate in the presence of essential oil from A. fastigiatum. Non-toxic concentrations of essential oil from A. fastigiatum were evaluated in cultures of peripheral blood leucocytes using the trypan blue exclusion assay by flow cytometry. GC–MS analysis revealed that the prevalent compounds identified in the essential oil from A. fastigiatum sample were α-pinene, limonene, trans-caryophyllene, α-humulene, caryophyllene oxide, 1,2-humulene-epoxide, 1,6-humulanodien-3-ol, and α-cadinol. Results showed that exposure to essential oil from A. fastigiatum at concentrations of 0.5×10−2 and 1×10−2μl/ml caused no alterations in leukocyte viability as compared to the control group. Both concentrations lowered the percentage of tumor necrosis factor alpha (+)-lymphocytes and neutrophils. There were no changes in the percentage of lymphocytes positive for the interferon gamma cytokine. Our results suggest that part of the anti-inflammatory activity attributed to A. fastigiatum may be due to the effect of some of its components in decreasing the number of cells that produce the pro-inflammatory cytokine tumor necrosis factor alpha

Fluctuations and Dissipation of Coherent Magnetization

A quantum mechanical model is used to derive a generalized Landau-Lifshitz equation for a magnetic moment, including fluctuations and dissipation. The model reproduces the Gilbert-Brown form of the equation in the classical limit. The magnetic moment is linearly coupled to a reservoir of bosonic degrees of freedom. Use of generalized coherent states makes the semiclassical limit more transparent within a path-integral formulation. A general fluctuation-dissipation theorem is derived. The magnitude of the magnetic moment also fluctuates beyond the Gaussian approximation. We discuss how the approximate stochastic description of the thermal field follows from our result. As an example, we go beyond the linear-response method and show how the thermal fluctuations become anisotropy-dependent even in the uniaxial case.Comment: 22 page

The AdS4/CFT3 algebraic curve

We present the OSp(2,2|6) symmetric algebraic curve for the AdS4/CFT3 duality recently proposed in arXiv:0806.1218. It encodes all classical string solutions at strong t'Hooft coupling and the full two loop spectrum of long single trace gauge invariant operators in the weak coupling regime. This construction can also be used to compute the complete superstring semi-classical spectrum around any classical solution. We exemplify our method on the BMN point-like string.Comment: Typos and factors of 2 fixed. Main results are not affecte

Dehydrin-Like Proteins in Soybean Seeds in Response to Drought Stress during Seed Filling

There is no information on accumulation of dehydrin proteins during seed development and maturation of soybean [Glycine max (L.) Merr.] in response to drought stress. Our objective was to study accumulation of dehydrin-like proteins in developing soybean seeds in response to drought stress. A greenhouse experiment and a field experiment were conducted. In the greenhouse experiment, three treatments were imposed on soybean plants after beginning of linear seed filling (R5): well-watered (WW), gradual stress (GS) imposed before severe stress, and sudden severe stress (SS). In the field treatments were irrigation (I) and nonirrigation (NI) (rainfed) conditions imposed from R5 to R8 (mature seeds). Greenhouse results indicated dehydrin-like proteins (28 and 32 kDa) were detected 18 d after R5 (R5.8) in developing seeds from drought-stressed plants but not in seeds from the well-watered plants. In the mature seeds, dehydrin-like proteins (28, 32, and 34 kDa) were detected in seeds from drought-stressed plants as well as the well-watered plants. In the field, dehydrin-like proteins accumulated similarly under irrigation and nonirrigation conditions, with the first detection for dehydrins (28 and 32 kDa) at 22 d after R5 (R6). Accumulation of dehydrin-like proteins was maximal in seeds harvested at 43 d after R5 (seed physiological maturity)

The all loop AdS4/CFT3 Bethe ansatz

We propose a set of Bethe equations yielding the full asymptotic spectrum of the AdS4/CFT3 duality proposed in arXiv:0806.1218 to all orders in the t'Hooft coupling. These equations interpolate between the 2-loop Bethe ansatz of Minahan and Zarembo arXiv:0806.3951 and the string algebraic curve of arXiv:0807.0437. The several SU(2|2) symmetries of the theory seem to highly constrain the form of the Bethe equations up to a dressing factor whose form we also conjecture.Comment: References added. Factor of 2 in the discussion of the (generalized) scaling function fixe