The reduction, verification and interpretation of MAGSAT magnetic data over Canada

Consideration is being given to representing the magnetic field in the area 40 deg N to 83 deg N by means of functions in spherical coordinates. A solution to Laplace's equation for the magnetic potential over a restricted area was found, and programming and testing are currently being carried out. Magnetic anomaly modelling is proceeding. The program SPHERE, which was adapted to function correctly on the Cyber computer, is now operational, for deriving gravity and magnetic models in a spherical coordinate system

Structural Heterogeneity and Quantitative FRET Efficiency Distributions of Polyprolines through a Hybrid Atomistic Simulation and Monte Carlo Approach

Förster Resonance Energy Transfer (FRET) experiments probe molecular distances via distance dependent energy transfer from an excited donor dye to an acceptor dye. Single molecule experiments not only probe average distances, but also distance distributions or even fluctuations, and thus provide a powerful tool to study biomolecular structure and dynamics. However, the measured energy transfer efficiency depends not only on the distance between the dyes, but also on their mutual orientation, which is typically inaccessible to experiments. Thus, assumptions on the orientation distributions and averages are usually made, limiting the accuracy of the distance distributions extracted from FRET experiments. Here, we demonstrate that by combining single molecule FRET experiments with the mutual dye orientation statistics obtained from Molecular Dynamics (MD) simulations, improved estimates of distances and distributions are obtained. From the simulated time-dependent mutual orientations, FRET efficiencies are calculated and the full statistics of individual photon absorption, energy transfer, and photon emission events is obtained from subsequent Monte Carlo (MC) simulations of the FRET kinetics. All recorded emission events are collected to bursts from which efficiency distributions are calculated in close resemblance to the actual FRET experiment, taking shot noise fully into account. Using polyproline chains with attached Alexa 488 and Alexa 594 dyes as a test system, we demonstrate the feasibility of this approach by direct comparison to experimental data. We identified cis-isomers and different static local environments as sources of the experimentally observed heterogeneity. Reconstructions of distance distributions from experimental data at different levels of theory demonstrate how the respective underlying assumptions and approximations affect the obtained accuracy. Our results show that dye fluctuations obtained from MD simulations, combined with MC single photon kinetics, provide a versatile tool to improve the accuracy of distance distributions that can be extracted from measured single molecule FRET efficiencies

Toll-like receptors (TLRs) and mannan-binding lectin (MBL): On constant alert in a hostile environment

In the beginning were neither B cells nor T cells nor antibodies, but innate immune defense alone. The primary functional theme of innate immunity is the distinction between self and non-self, which is maintained by a vast number of cellular and subcellular components. In this context, the immense importance of the Toll-like receptors (TLRs) is well established. Positive (Darwinian) selection seems to be acting on the ligand-binding domains of these molecules, suggesting a selection pattern similar to that previously observed in the MHC proteins. In sharp contrast to TLRs, the biological significance of mannan-binding lectin (MBL) is controversial, and, concerning humans, it has been suggested that low concentration of MBL in serum represents a selective advantage. In this mini-review, based on a doctoral thesis, evolutionary aspects of TLRs and MBL are discussed

The environmental impacts of palm oil in context

Delivering the Sustainable Development Goals (SDGs) requires balancing demands on land between agriculture (SDG 2) and biodiversity (SDG 15). The production of vegetable oils, and in particular palm oil, illustrates these competing demands and trade-offs. Palm oil accounts for 40% of the current global annual demand for vegetable oil as food, animal feed, and fuel (210 million tons (Mt)), but planted oil palm covers less than 5-5.5% of total global oil crop area (ca. 425 Mha), due to oil palm’s relatively high yields5. Recent oil palm expansion in forested regions of Borneo, Sumatra, and the Malay Peninsula, where >90% of global palm oil is produced, has led to substantial concern around oil palm’s role in deforestation. Oil palm expansion’s direct contribution to regional tropical deforestation varies widely, ranging from 3% in West Africa to 47% in Malaysia. Oil palm is also implicated in peatland draining and burning in Southeast Asia. Documented negative environmental impacts from such expansion include biodiversity declines, greenhouse gas emissions, and air pollution. However, oil palm generally produces more oil per area than other oil crops, is often economically viable in sites unsuitable for most other crops, and generates considerable wealth for at least some actors. Global demand for vegetable oils is projected to increase by 46% by 20509. Meeting this demand through additional expansion of oil palm versus other vegetable oil crops will lead to substantial differential effects on biodiversity, food security, climate change, land degradation, and livelihoods. Our review highlights that, although substantial gaps remain in our understanding of the relationship between the environmental, socio-cultural and economic impacts of oil palm, and the scope, stringency and effectiveness of initiatives to address these, there has been little research into the impacts and trade-offs of other vegetable oil crops. 65 Greater research attention needs to be given to investigating the impacts of palm oil production 66 compared to alternatives for the trade-offs to be assessed at a global scale

Influence of integrated soil fertility management in wheat and tef productivity and soil chemical properties in the highland tropical environment

Soil fertility depletion and soil quality decline have been threatening the ecological and economic sustainability of crop production. In order to improve soil fertility and nutrient management approaches, on-farm integrated soil fertility management (ISFM) trials were conducted to evaluate the effects of organic and inorganic fertilizers on wheat (Triticum estivum L.) and tef (Eragrostis tef) yield and soil fertility in the highland Nitisol area of Ethiopia during 2010 and 2011 cropping seasons. The treatments were five selected combinations of N and P, manure and compost. These included control, farmers' practice (23/10 kg NP ha^-1), recommended NP rate (60/20 kg NP ha^-1), 50% of recommended NP rate (30/10 NP kg ha^-1) + 50% manure and compost as inorganic N equivalence (3.25 tons ha^-1). and 50% manure + 50% compost as N equivalence. Results revealed that yields of wheat and tef, and some soil chemical properties significantly responded to the different soil fertility management treatments. The application of 60/20 kg NP ha^-1 and 30/10 kg NP ha^-1 with 50% manure and compost as N equivalence increased mean grain yield of wheat by 151 and 129% respectively compared to the control, and by 85 and 68% respectively compared to the farmers' treatment (23/10 kg NP ha^-1). Similarly, the same treatments increased tef grain yield by 141 and 122% compared to the control, and by 44 and 33% compared to the farmers' treatment. The application of compost or manure with half the recommended NP fertilizer rate resulted in a comparable yield as that of full NP dose, which could beconsidered as an alternative option for sustainable soil health and crop productivity. In conclusion, the two year result showed that the application of ISFM may optimize yield of wheat and tef as well as improve the fertility status of the soil