Structural analysis of Salmonella enterica effector protein SopD

Salmonella outer protein D (SopD) is a type III secreted virulence effector protein from Salmonella enterica. Full-length SopD and SopD lacking 16 amino acids at the N-terminus (SopDDeltaN) have been expressed as fusions with GST in Escherichia coli, purified with a typical yield of 20-30 mg per litre of cell culture and crystallized. Biophysical characterization has been carried out mainly on SopDDeltaN. Analytical size exclusion chromatography shows that SopDDeltaN is monomeric and probably globular in aqueous solution. The secondary structure composition, calculated from the CD spectrum, is mixed (38% alpha-helix and 26% beta-strand). Sequence analysis indicates that SopD contains a coiled coil motif, as found in numerous other type III secretion system-associated proteins. This suggests that SopD has the potential for one or more heterotypic protein-protein interactions. Limited trypsin digestion of SopDDeltaN, monitored by both one-dimensional proton NMR spectroscopy and SDS-PAGE, shows that the protein has a large, protease-resistant core domain of 286 amino acid residues. This single-domain architecture suggests that SopD lacks a cognate chaperone. In crystallization trials, SopDDeltaN produced better crystals than either full-length SopD or trypsin-digested SopDDeltaN. Diffraction to 3.0 Angstrom resolution has so far been obtained from crystals of SopDDeltaN

Оценка фискальной иллюзии при налогообложении доходов физических лиц

Фискальная иллюзия сама по себе не является негативным явлением, она всего лишь следствие осуществляемой фискальной политики государства. Тем не менее, фискальная иллюзия нарушает представление экономических агентов о масштабах государственного влияния в перераспределении своих доходов и тем самым способствует принятию ими не самых эффективных экономических решений.Фіскальна ілюзія сама по собі не є негативним явищем, вона всього лише слідство здійснюваної фіскальної політики держави. Проте, фіскальна ілюзія порушує уявлення економічних агентів про масштаби державного впливу в перерозподілі своїх доходів і тим самим сприяє ухваленню ними не найефективніших економічних рішень

Towards Zero-waste Mineral Carbon Sequestration Via Two-way Valorization of Ironmaking Slag

A three-stage process was developed to transform blast furnace slag (BFS) into two valuable products: precipitated calcium carbonate (PCC) and zeolitic materials. The conceptualized process aims to simultaneously achieve sustainable CO2 sequestration and solid waste elimination. Calcium is first selectively extracted by leaching with an organic acid, followed by carbonation of the leachate to precipitate CaCO3. In parallel, the hydrothermal conversion of the extracted solid residues in alkali solution induces the dissolution/precipitation mechanism that leads to the formation of micro- and meso-porous zeolitic materials. Leaching selectivity was identified as a key factor in the valorization potential of both products. Acetic acid satisfactorily limited the leaching of aluminium, required for the subsequent synthesis of zeolites, and carbonation of the acetic acid leachate resulted in the production of PCC of varied mineralogy and morphology, depending on processing conditions. In the hydrothermal conversion stage, the formation of zeolitic phases was observed, and their characteristics were found to vary depending on the calcium extraction efficiency in the previous stage, and the alkali (NaOH) concentration. The zeolitic phases produced, in order of increasing valorization potential, were: tobermorite, sodalite, lazurite, and analcime

Extracorporeal treatment of metforminassociated lactic acidosis in clinical practice:A retrospective cohort study

Purpose To assess whether extracorporeal treatment (ECTR) improves outcome of patients with metformin-associated lactic acidosis (MALA) and to evaluate the clinical applicability of the Extracorporeal Treatments in Poisoning Workgroup (EXTRIP) criteria for starting ECTR in metformin poisoning. Methods Patients with metformin serum concentrations above 2 mg/l who were admitted in the Deventer Teaching Hospital between January 2000 and July 2019 and complied with the definition of MALA (pH 5 mmol/l) were included. Mortality and clinical parameters of patients treated with ECTR or not were compared. In addition, treatment of MALA in clinical practice was verified against the criteria of EXTRIP. Results Forty-two patients were included. Lactate (13.8 versus 10.5 mmol/l, p = 0.01), creatinine (575 versus 254 umol/l, p <0.01)), metformin (29.4 versus 8.6 mg/l, p <0.01) concentrations, and vasopressor requirement (72% versus 23%, p <0.01) were significantly higher in the ECTR-group. Blood pH (7.05 versus 7.19, p = 0.03) and bicarbonate (6 versus 11 mmol/l, p <0.01) were significantly lower. Mortality, length of hospital stay, and mechanical ventilation requirement were not statistically different. In 83% of patients, treatment of MALA was in accordance with the EXTRIP criteria. Conclusions Although there was no statistical benefit in mortality shown from ECTR, ECTR might be lifesaving in MALA, considering the ECTR-group was significantly sicker than the non-ECTR-group. The majority of patients were treated in line with the EXTRIP criteria. Severity of lactic acidosis and renal impairment were the main indications for initiating ECTR

The impact of COVID-19 infection, the pandemic and its associated control measures on patients with Pompe disease

Background: Patients with Pompe disease, a rare metabolic myopathy, were thought to be at increased risk of severe COVID-19 disease during the pandemic. In addition, the lockdown may have affected their regular treatment. Objective: To assess the perceived effect of COVID-19 infection and of the pandemic on the treatment, and physical and mental health of patients with Pompe disease. Methods: Patients with Pompe disease over 16 years of age participated in an international, cross-sectional, online survey (September 20, 2022–November 7, 2022). The questionnaire, available in eight languages, consisted of 89 questions divided into 3 parts: (A) severity of Pompe disease, (B) COVID-19 precautions and infection(s) and (C) effects of the COVID-19 pandemic. Results: Among 342 respondents, originating from 25 different countries, 47.6% experienced one or more COVID-19 infections. While most recovered within 4 weeks (69.7%) and only eight patients needed to be admitted to the hospital, 42.2% of patients experienced an impact of the infection on their overall condition, respiratory status and/or mobility status. More severely affected patients took more stringent control measures. The pandemic additionally caused interruptions in medical care in many patients (56.0%) and 17.2% of patients experienced interruptions of enzyme replacement therapy. The pandemic also affected many patients’ disease severity (27.7%), mental health (55.4%) and feeling of loneliness (43.4%). Conclusion: COVID-19 infection(s) and the pandemic affected the treatment, physical health and mental health of patients with Pompe disease, emphasizing the importance of continued patient centered care during a difficult time such as the COVID-19 pandemic.</p

The effects of wildfire frequency on post-fire soil surface water dynamics

Increasing wildfire frequency in the Mediterranean Basin could affect future plant-soil–water-dynamics. The capacity of soils to retain water is a key parameter affecting plant post-fire regeneration. Yet, few research has looked at how different soil properties related to water retention is affected by increasing wildfire frequency. This study aimed at understanding the relationship between wildfire frequency, soil–water-related properties and the dynamics of surface water in soils. To this, after a 2012-summer wildfire in Portugal, three sets of three replicate maritime pine stands with contrasted wildfire frequency were selected (0 vs. 1 vs. 4 fires since 1975). At each of the nine study sites, three re-sprouter shrubs and neighbouring bare soil were chosen (54 microsites). There, soil cover, soil–water retention curves and surface (0–5 cm) soil–water-related properties (texture, bulk density, organic matter content, soil moisture, soil surface water repellency) were monitored for one year. Furthermore, records of post-fire soil moisture dynamics were analysed continuously using 72 probes installed at 2.5 and 7.5 cm depth. The hillslopes affected by 1 fire showed higher plant recovery than the 4 fires hillslopes. During the dry season, the threshold for water stress was reached 17 days sooner in the 4 fires hillslopes, and also 10 days sooner on bare microsites. Periods of plant water stress were longer and bare soil patches size bigger. The increase in wildfire frequency promoted high soil organic matter contents but less available water content, stressing the importance of soil organic matter quality characterization in water-related properties.Open access funding provided by FCT|FCCN (b-on). This work was funded and performed within the scope of the CASCADE-PROJECT (Catastrophic shifts in drylands: how can we prevent ecosystem degradation? Grant agreement: 28306), funded by the European Commission (FP7-ENV.2011.2.1.4-2-Behaviour o ecosystems, thresholds and tipping points). We acknowledge financial support to CESAM by FCT/MCTES thought national funds (UIDP/50017/2020+UIDB/50017/2020+LA/P/0094/2020). We also acknowledge financial support the University of Aveiro through the assistant research contract of Oscar González-Pelayo (CDL-CTTRI-97-ARH/2018 (REF. 190-97-ARH/2018), and to the MED & CHANGE-University of Évora through the auxiliary research contract (Ref. UIDB/05183/2020). Thanks are also due to FCT for the research contract of Sérgio Prats (CDL-CTTRI-88-ARH/2018 REF.-138-88-ARH/2018) and auxiliary research contract (CEECIND/01473/2020), and Maruxa Malvar (SFRH/BPD/97977/2013), and the IF research grant of Jacob Keizer (IF/01465/2015) funded by national funds (OE), through the Portuguese Foundation for Science and Technology (FCT/MCTES)