Oser le génie végétal en rivière de montagne – Retour d'expérience sur les ouvrages Géni'Alp

Encore peu utilisées sur les cours d'eau dynamiques comme les rivières de montagne, les techniques de génie végétal représentent pourtant une solution écologique et économique pour la protection des berges. En s'appuyant sur le retour d'expérience de plusieurs chantiers pilotes en France et en Suisse, cet article s'intéresse à la capacité des techniques de génie végétal à résister sur des rivières de montagne associant contraintes climatiques, végétation et hydrologie particulière avec d'importantes contraintes physiques liées à l'eau et au transport solide

Oser le génie végétal en rivière de montagne ::retour d'expérience sur les ouvrages Géni'Alp

Encore peu utilisées sur les cours d'eau dynamiques comme les rivières de montagne, les techniques de génie végétal représentent pourtant une solution écologique et économique pour la protection des berges. En s'appuyant sur le retour d'expérience de plusieurs chantiers pilotes en France et en Suisse, cet article s'intéresse à la capacité des techniques de génie végétal à résister sur des rivières de montagne associant contraintes climatiques, végétation et hydrologie particulière avec d'importantes contraintes physiques liées à l'eau et au transport solide

An endogenous vitamin K-dependent mechanism regulates cell proliferation in the brain subventricular stem cell niche.

International audienceNeural stem cells (NSC) persist in the adult mammalian brain, within the subventricular zone (SVZ). The endogenous mechanisms underpinning SVZ stem and progenitor cell proliferation are not fully elucidated. Vitamin K-dependent proteins (VKDPs) are mainly secreted factors that were initially discovered as major regulators of blood coagulation. Warfarin ((S(-)-3-acetonylbenzyl)-4-hydroxycoumarin)), a widespread anticoagulant, is a vitamin K antagonist that inhibits the production of functional VKDP. We demonstrate that the suppression of functional VKDPs production, in vitro, by exposure of SVZ cell cultures to warfarin or, in vivo, by its intracerebroventricular injection to mice, leads to a substantial increase in SVZ cell proliferation. We identify the anticoagulant factors, protein S and its structural homolog Gas6, as the two only VKDPs produced by SVZ cells and describe the expression and activation pattern of their Tyro3, Axl, and Mer tyrosine kinase receptors. Both in vitro and in vivo loss of function studies consisting in either Gas6 gene invalidation or in endogenous protein S neutralization, provided evidence for an important novel regulatory role of these two VKDPs in the SVZ neurogenic niche. Specifically, we show that while a loss of Gas6 leads to a reduction in the numbers of stem-like cells and in olfactory bulb neurogenesis, endogenous protein S inhibits SVZ cell proliferation. Our study opens up new perspectives for investigating further the role of vitamin K, VKDPs, and anticoagulants in NSC biology in health and disease

Biogeographical patterns of the soil fungal:bacterial ratio across France

International audienceSoils are one of the major reservoirs of biological diversity on our planet because they host a huge richness of microorganisms. The fungal:bacterial (F:B) ratio targets two major functional groups of organisms in soils and can improve our under standing of their importance and efficiency for soil functioning. To better decipher the variability of this ratio and rank the environmental parameters involved, we used the French Soil Quality Monitoring Network (RMQS)-one of the most extensive and a priori-free soil sampling surveys, based on a systematic 16 km × 16 km grid and including more than 2,100 samples. F:B ratios, measured by quantitative PCR targeting the 18S and 16S rDNA genes, turned out to be heterogenously distributed and spatially structured in geographical patterns across France. These distribution patterns differed from bacterial or fungal densities taken separately, supporting the hypothesis that the F:B ratio is not the mere addition of each density but rather results from the complex interactions of the two functional groups. The F:B ratios were mainly influenced by soil characteristics and land management. Among soil characteristics, the pH and, to a lesser extent, the organic carbon content and the carbon:nitrogen (C:N) ratio were the main drivers. These results improved our understanding of soil microbial communities, and from an operational point of view, they suggested that the F:B ratio should be a useful new bioindicator of soil status. The resulting dataset can be considered as a first step toward building up a robust repository essential to any bioindicator and aimed at guiding and helping decision making. IMPORTANCE In the face of human disturbances, microbial activity can be impacted and, e.g., can result in the release of large amounts of soil carbon into the atmosphere, with global impacts on temperature. Therefore, the development and the regular use of soil bioindicators are essential to (i) improve our knowledge of soil microbial commun ities and (ii) guide and help decision makers define suitable soil management strat egies. Bacterial and fungal communities are key players in soil organic matter turnover, but with distinct physiological and ecological characteristics. The fungal:bacterial ratio targets these two major functional groups by investigating their presence and their equilibrium. The aim of our study is to characterize this ratio at a territorial scale and rank the environmental parameters involved so as to further develop a robust repository essential to the interpretation of any bioindicator of soil quality. KEYWORDS soil microbiology, molecular biology, microbial ecology, bioindicators S oil microbial communities play essential roles in nutrient cycling and ecosystem productivity as principal decomposers of organic matter (1, 2). Bacterial and fungal communities largely control the soil organic matter turnover, but with distinct physio logical abilities regarding soil functions (2, 3). In bacterium-dominated soils, organic matter decomposition and nutrient mineralization are fast, while the conversion rate

Agro-Eco Sol, un outil de diagnostic des fonctions du sol basé sur des bioindicateurs bioindicateurs - Structure et règles générales d’interprétation

National audienc

Agro-Eco Sol, un outil de diagnostic des fonctions du sol basé sur des bioindicateurs ; structure et règles générales d’interprétation

National audienc

AGRO-ECO SOL, un outil de diagnostic des fonctions du sol et de conseil basé sur des bioindicateurs - schéma général d’interprétation

National audienc

Application of high-density DNA resequencing microarray for detection and characterization of botulinum neurotoxin-producing clostridia.

Clostridium botulinum and related clostridia express extremely potent toxins known as botulinum neurotoxins (BoNTs) that cause severe, potentially lethal intoxications in humans. These BoNT-producing bacteria are categorized in seven major toxinotypes (A through G) and several subtypes. The high diversity in nucleotide sequence and genetic organization of the gene cluster encoding the BoNT components poses a great challenge for the screening and characterization of BoNT-producing strains.In the present study, we designed and evaluated the performances of a resequencing microarray (RMA), the PathogenId v2.0, combined with an automated data approach for the simultaneous detection and characterization of BoNT-producing clostridia. The unique design of the PathogenID v2.0 array allows the simultaneous detection and characterization of 48 sequences targeting the BoNT gene cluster components. This approach allowed successful identification and typing of representative strains of the different toxinotypes and subtypes, as well as the neurotoxin-producing C. botulinum strain in a naturally contaminated food sample. Moreover, the method allowed fine characterization of the different neurotoxin gene cluster components of all studied strains, including genomic regions exhibiting up to 24.65% divergence with the sequences tiled on the arrays.The severity of the disease demands rapid and accurate means for performing risk assessments of BoNT-producing clostridia and for tracing potentials sources of contamination in outbreak situations. The RMA approach constitutes an essential higher echelon component in a diagnostics and surveillance pipeline. In addition, it is an important asset to characterise potential outbreak related strains, but also environment isolates, in order to obtain a better picture of the molecular epidemiology of BoNT-producing clostridia

AGRO-ECO SOL, un outil de diagnostic des fonctions du sol et de conseil basé sur des bioindicateurs - schéma général d’interprétation

National audienc

Agro-Eco Sol, un outil de diagnostic des fonctions du sol basé sur des bioindicateurs bioindicateurs - Structure et règles générales d’interprétation

National audienc