136 research outputs found
Effect of glycerol and dimethyl sulfoxide on the phase behavior of lysozyme: Theory and experiments
Salt, glycerol and dimethyl sulfoxide (DMSO) are used to modify the
properties of protein solutions. We experimentally determined the effect of
these additives on the phase behavior of lysozyme solutions. Upon the addition
of glycerol and DMSO, the fluid-solid transition and the gas-liquid coexistence
curve (binodal) shift to lower temperatures and the gap between them increases.
The experimentally observed trends are consistent with our theoretical
predictions based on the thermodynamic perturbation theory (TPT) and the
Derjaguin-Landau-Verwey-Overbeek (DLVO) model for the lysozyme-lysozyme pair
interactions. The values of the parameters describing the interactions, namely
the refractive indices, dielectric constants, Hamaker constant and cut-off
length, are extracted from literature or are experimentally determined by
independent experiments, including static light scattering to determine the
second virial coefficient. We observe that both, glycerol and DMSO, render the
potential more repulsive, while sodium chloride reduces the repulsion.Comment: Manuscript accepted for publication in The Journal of Chemical
Physic
Influence of Hydrodynamic Interactions on Mechanical Unfolding of Proteins
We incorporate hydrodynamic interactions in a structure-based model of
ubiquitin and demonstrate that the hydrodynamic coupling may reduce the peak
force when stretching the protein at constant speed, especially at larger
speeds. Hydrodynamic interactions are also shown to facilitate unfolding at
constant force and inhibit stretching by fluid flows.Comment: to be published in Journal of Physics: Condensed Matte
Aspects of the dynamics of colloidal suspensions: Further results of the mode-coupling theory of structural relaxation
Results of the idealized mode-coupling theory for the structural relaxation
in suspensions of hard-sphere colloidal particles are presented and discussed
with regard to recent light scattering experiments. The structural relaxation
becomes non-diffusive for long times, contrary to the expectation based on the
de Gennes narrowing concept. A semi-quantitative connection of the wave vector
dependences of the relaxation times and amplitudes of the final
-relaxation explains the approximate scaling observed by Segr{\`e} and
Pusey [Phys. Rev. Lett. {\bf 77}, 771 (1996)]. Asymptotic expansions lead to a
qualitative understanding of density dependences in generalized Stokes-Einstein
relations. This relation is also generalized to non-zero frequencies thereby
yielding support for a reasoning by Mason and Weitz [Phys. Rev. Lett {\bf 74},
1250 (1995)]. The dynamics transient to the structural relaxation is discussed
with models incorporating short-time diffusion and hydrodynamic interactions
for short times.Comment: 11 pages, 9 figures; to be published in Phys. Rev.
Independent Ion Migration in Suspensions of Strongly Interacting Charged Colloidal Spheres
We report on sytematic measurements of the low frequency conductivity in
aequous supensions of highly charged colloidal spheres. System preparation in a
closed tubing system results in precisely controlled number densities between
1E16/m3 and 1E19/m^3 (packing fractions between 1E-7 and 1E-2) and electrolyte
concentrations between 1E-7 and 1E-3 mol/l. Due to long ranged Coulomb
repulsion some of the systems show a pronounced fluid or crystalline order.
Under deionized conditions we find s to depend linearily on the packing
fraction with no detectable influence of the phase transitions. Further at
constant packing fraction s increases sublinearily with increasing number of
dissociable surface groups N. As a function of c the conductivity shows
pronounced differences depending on the kind of electrolyte used. We propose a
simple yet powerful model based on independent migration of all species present
and additivity of the respective conductivity contributions. It takes account
of small ion macro-ion interactions in terms of an effectivly transported
charge. The model successfully describes our qualitatively complex experimental
observations. It further facilitates quantitative estimates of conductivity
over a wide range of particle and experimental parameters.Comment: 32 pages, 17 figures, 2 tables, Accepted by Physical Review
Nonergodicity transitions in colloidal suspensions with attractive interactions
The colloidal gel and glass transitions are investigated using the idealized
mode coupling theory (MCT) for model systems characterized by short-range
attractive interactions. Results are presented for the adhesive hard sphere and
hard core attractive Yukawa systems. According to MCT, the former system shows
a critical glass transition concentration that increases significantly with
introduction of a weak attraction. For the latter attractive Yukawa system, MCT
predicts low temperature nonergodic states that extend to the critical and
subcritical region. Several features of the MCT nonergodicity transition in
this system agree qualitatively with experimental observations on the colloidal
gel transition, suggesting that the gel transition is caused by a low
temperature extension of the glass transition. The range of the attraction is
shown to govern the way the glass transition line traverses the phase diagram
relative to the critical point, analogous to findings for the fluid-solid
freezing transition.Comment: 11 pages, 7 figures; to be published in Phys. Rev. E (1 May 1999
Effect of Composition Changes on the Structural Relaxation of a Binary Mixture
Within the mode-coupling theory for idealized glass transitions, we study the
evolution of structural relaxation in binary mixtures of hard spheres with size
ratios of the two components varying between 0.5 and 1.0. We find two
scenarios for the glassy dynamics. For small size disparity, the mixing yields
a slight extension of the glass regime. For larger size disparity, a
plasticization effect is obtained, leading to a stabilization of the liquid due
to mixing. For all , a decrease of the elastic moduli at the transition
due to mixing is predicted. A stiffening of the glass structure is found as is
reflected by the increase of the Debye-Waller factors at the transition points.
The critical amplitudes for density fluctuations at small and intermediate wave
vectors decrease upon mixing, and thus the universal formulas for the
relaxation near the plateau values describe a slowing down of the dynamics upon
mixing for the first step of the two-step relaxation scenario. The results
explain the qualitative features of mixing effects reported by Williams and van
Megen [Phys. Rev. E \textbf{64}, 041502 (2001)] for dynamical light-scattering
measurements on binary mixtures of hard-sphere-like colloids with size ratio
Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750)
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