Molecular basis for modulation of the p53 target selectivity by KLF4

The tumour suppressor p53 controls transcription of various genes involved in apoptosis, cell-cycle arrest, DNA repair and metabolism. However, its DNA-recognition specificity is not nearly sufficient to explain binding to specific locations in vivo. Here, we present evidence that KLF4 increases the DNA-binding affinity of p53 through the formation of a loosely arranged ternary complex on DNA. This effect depends on the distance between the response elements of KLF4 and p53. Using nuclear magnetic resonance and fluorescence techniques, we found that the amino-terminal domain of p53 interacts with the KLF4 zinc fingers and mapped the interaction site. The strength of this interaction was increased by phosphorylation of the p53 N-terminus, particularly on residues associated with regulation of cell-cycle arrest genes. Taken together, the cooperative binding of KLF4 and p53 to DNA exemplifies a regulatory mechanism that contributes to p53 target selectivity

Exact infinite-time statistics of the Loschmidt echo for a quantum quench

The equilibration dynamics of a closed quantum system is encoded in the long-time distribution function of generic observables. In this paper we consider the Loschmidt echo generalized to finite temperature, and show that we can obtain an exact expression for its long-time distribution for a closed system described by a quantum XY chain following a sudden quench. In the thermodynamic limit the logarithm of the Loschmidt echo becomes normally distributed, whereas for small quenches in the opposite, quasi-critical regime, the distribution function acquires a universal double-peaked form indicating poor equilibration. These findings, obtained by a central limit theorem-type result, extend to completely general models in the small-quench regime.Comment: 4 pages, 2 figure

Quantum phase transition in quantum wires controlled by an external gate

We consider electrons in a quantum wire interacting via a long-range Coulomb potential screened by a nearby gate. We focus on the quantum phase transition from a strictly one-dimensional to a quasi-one-dimensional electron liquid, that is controlled by the dimensionless parameter $n x_0$, where $n$ is the electron density and $x_0$ is the characteristic length of the transverse confining potential. If this transition occurs in the low-density limit, it can be understood as the deformation of the one-dimensional Wigner crystal to a zigzag arrangement of the electrons described by an Ising order parameter. The critical properties are governed by the charge degrees of freedom and the spin sector remains essentially decoupled. At large densities, on the other hand, the transition is triggered by the filling of a second one-dimensional subband of transverse quantization. Electrons at the bottom of the second subband interact strongly due to the diverging density of states and become impenetrable. We argue that this stabilizes the electron liquid as it suppresses pair-tunneling processes between the subbands that would otherwise lead to an instability. However, the impenetrable electrons in the second band are screened by the excitations of the first subband, so that the transition is identified as a Lifshitz transition of impenetrable polarons. We discuss the resulting phase diagram as a function of $n x_0$.Comment: 18 pages, 8 figures, minor changes, published versio

Quantum correlations in the temporal CHSH scenario

We consider a temporal version of the CHSH scenario using projective measurements on a single quantum system. It is known that quantum correlations in this scenario are fundamentally more general than correlations obtainable with the assumptions of macroscopic realism and non-invasive measurements. In this work, we also educe some fundamental limitations of these quantum correlations. One result is that a set of correlators can appear in the temporal CHSH scenario if and only if it can appear in the usual spatial CHSH scenario. In particular, we derive the validity of the Tsirelson bound and the impossibility of PR-box behavior. The strength of possible signaling also turns out to be surprisingly limited, giving a maximal communication capacity of approximately 0.32 bits. We also find a temporal version of Hardy's nonlocality paradox with a maximal quantum value of 1/4.Comment: corrected versio

Kinematic dynamo wave in the vicinity of the solar poles

We consider a dynamo wave in the solar convective shell for the kinematic $\alpha\omega$-dynamo model. The spectrum and eigenfunctions of the corresponding equations are derived analytically with the aid of the WKB method. Our main aim here is to investigate the dynamo wave behavior in the vicinity of the solar poles. Explicit expressions for the incident and reflected waves are obtained. The reflected wave is shown to be relatively weak in comparison to the incident wave. The phase shifts and the ratio of amplitudes of the two waves are found.Comment: 20 pages, 2 EPS figure

Shear-Driven Dynamo Waves in the Fully Nonlinear Regime

Large-scale dynamo action is well understood when the magnetic Reynolds number (Rm) is small, but becomes problematic in the astrophysically relevant large Rm limit since the fluctuations may control the operation of the dynamo, obscuring the large-scale behavior. Recent works by Tobias & Cattaneo demonstrated numerically the existence of large-scale dynamo action in the form of dynamo waves driven by strongly helical turbulence and shear. Their calculations were carried out in the kinematic regime in which the back-reaction of the Lorentz force on the flow is neglected. Here, we have undertaken a systematic extension of their work to the fully nonlinear regime. Helical turbulence and large-scale shear are produced self-consistently by prescribing body forces that, in the kinematic regime, drive flows that resemble the original velocity used by Tobias & Cattaneo. We have found four different solution types in the nonlinear regime for various ratios of the fluctuating velocity to the shear and Reynolds numbers. Some of the solutions are in the form of propagating waves. Some solutions show large-scale helical magnetic structure. Both waves and structures are permanent only when the kinetic helicity is non-zero on average

Typical local measurements in generalised probabilistic theories: emergence of quantum bipartite correlations

What singles out quantum mechanics as the fundamental theory of Nature? Here we study local measurements in generalised probabilistic theories (GPTs) and investigate how observational limitations affect the production of correlations. We find that if only a subset of typical local measurements can be made then all the bipartite correlations produced in a GPT can be simulated to a high degree of accuracy by quantum mechanics. Our result makes use of a generalisation of Dvoretzky's theorem for GPTs. The tripartite correlations can go beyond those exhibited by quantum mechanics, however.Comment: 5 pages, 1 figure v2: more details in the proof of the main resul

Probing Spin-Polarized Currents in the Quantum Hall Regime

An experiment to probe spin-polarized currents in the quantum Hall regime is suggested that takes advantage of the large Zeeman-splitting in the paramagnetic diluted magnetic semiconductor zinc manganese selenide (Zn$_{1-x}$Mn$_x$Se). In the proposed experiment spin-polarized electrons are injected by ZnMnSe-contacts into a gallium arsenide (GaAs) two-dimensional electron gas (2DEG) arranged in a Hall bar geometry. We calculated the resulting Hall resistance for this experimental setup within the framework of the Landauer-B\"uttiker formalism. These calculations predict for 100% spininjection through the ZnMnSe-contacts a Hall resistance twice as high as in the case of no spin-polarized injection of charge carriers into a 2DEG for filling factor $\nu=2$. We also investigated the influence of the equilibration of the spin-polarized electrons within the 2DEG on the Hall resistance. In addition, in our model we expect no coupling between the contact and the 2DEG for odd filling factors of the 2DEG for 100% spininjection, because of the opposite sign of the g-factors of ZnMnSe and GaAs.Comment: 7 pages, 5 figure