Alignment of Linear Biochemical Pathways Using Protein Structural Classification

Metabolic, signaling and regulatory pathways form the basis of biological processes and are important for the analysis of cellular behavior and evolution. This paper presents an approach of aligning biochemical pathways on the basis of the structure of involved proteins and their classification. The suitable information is retrieved from an integrated database system.
SIGNALIGN is available at: http://agbi.techfak.uni-bielefeld.de/signalign/index.jsp 

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Description of two new actinosporean types from a brook of Fuji Mountain, Honshu, and from Chitose River, Hokkaido, Japan

Actinospore infection of oligochaetes living in the mud of 3 freshwater biotopes in Japan was studied. Using the cell-well plate method, a new aurantiactinomyxon type was found in 0.77 % of the examined Tubifex tubifex oligochaete specimens from a brook near Yamanashi Prefectural Fisheries Experimental Station on Fuji Mountain. In 0.14 % of Lumbriculus variagetus collected from Chitose River, near Chitose Salmon Hatchery, a new siedleckiella type was found, while at the same time 8.1 % of the Lumbriculus spp. oligochaetes released triactinomyxons of Myxobolus arcticus. Of the examined Rhyacodrilus komarovi oligochaetes collected from the Mena River system, Hokkaido, 0.2, 0.6, 0.5 and 0.8% were infected with echinactinomyxon, neoactinomyxum and 2 types of triactinomyxon spores, respectively, and described in our previous paper. The oligochaetes released actinospores for several weeks. Actinospore infection showed high intensity in positive oligochaetes in the case of all the actinosporean types. Two of the actinospore types (aurantiactinomyxon and siedleckiella) presented here have not been previously described

Magnetic susceptibilities of diluted magnetic semiconductors and anomalous Hall-voltage noise

The carrier spin and impurity spin densities in diluted magnetic semiconductors are considered using a semiclassical approach. Equations of motions for the spin densities and the carrier spin current density in the paramagnetic phase are derived, exhibiting their coupled diffusive dynamics. The dynamical spin susceptibilities are obtained from these equations. The theory holds for p-type and n-type semiconductors doped with magnetic ions of arbitrary spin quantum number. Spin-orbit coupling in the valence band is shown to lead to anisotropic spin diffusion and to a suppression of the Curie temperature in p-type materials. As an application we derive the Hall-voltage noise in the paramagnetic phase. This quantity is critically enhanced close to the Curie temperature due to the contribution from the anomalous Hall effect.Comment: 18 pages, 1 figure include

Optical properties of metallic (III,Mn)V ferromagnetic semiconductors in the infrared to visible range

We report on a study of the ac conductivity and magneto-optical properties of metallic ferromagnetic (III,Mn)V semiconductors in the infrared to visible spectrum. Our analysis is based on the successful kinetic exchange model for (III,Mn)V ferromagnetic semiconductors. We perform the calculations within the Kubo formalism and treat the disorder effects pertubatively within the Born approximation, valid for the metallic regime. We consider an eight-band Kohn-Luttinger model (six valence bands plus two conduction bands) as well as a ten-band model with additional dispersionless bands simulating phenomenologically the upper-mid-gap states induced by antisite and interstitial impurities. These models qualitatively account for optical-absorption experiments and predict new features in the mid-infrared Kerr angle and magnetic-circular-dichroism properties as a function of Mn concentration and free carrier density.Comment: 10 pages, 7 figures, some typos correcte

Heat transport in a Coulomb ion crystal with a topological defect

The thermodynamics of low-dimensional systems departs significantly from phenomenologically deducted macroscopic laws. Particular examples, not yet fully understood, are provided by the breakdown of Fourier's law and the ballistic transport of heat. Low-dimensional trapped ion systems provide an experimentally accessible and well-controlled platform for the study of these problems. In our work, we study the transport of thermal energy in low-dimensional trapped ion crystals, focusing in particular on the influence of the Aubry-like transition that occurs when a topological defect is present in the crystal. We show that the transition significantly hinders efficient heat transport, being responsible for the rise of a marked temperature gradient in the non-equilibrium steady state. Further analysis reveals the importance of the motional eigenfrequencies of the crystal.Comment: 9 pages, 5 figure

Absence of skew scattering in two-dimensional systems: Testing the origins of the anomalous Hall effect

We study the anomalous Hall conductivity in spin-polarized, asymmetrically confined two-dimensional electron and hole systems, focusing on skew-scattering contributions to the transport. We find that the skew scattering, principally responsible for the extrinsic contribution to the anomalous Hall effect, vanishes for the two-dimensional electron system if both chiral Rashba subbands are partially occupied, and vanishes always for the two-dimensional hole gas studied here, regardless of the band filling. Our prediction can be tested with the proposed coplanar two-dimensional electron/hole gas device and can be used as a benchmark to understand the crossover from the intrisic to the extrinsic anomalous Hall effect.Comment: 4 pages, 2 figures include

Doping dependence of the Neel temperature in Mott-Hubbard antiferromagnets: Effect of vortices

The rapid destruction of long-range antiferromagnetic order upon doping of Mott-Hubbard antiferromagnetic insulators is studied within a generalized Berezinskii-Kosterlitz-Thouless renormalization group theory in accordance with recent calculations suggesting that holes dress with vortices. We calculate the doping-dependent Neel temperature in good agreement with experiments for high-Tc cuprates. Interestingly, the critical doping where long-range order vanishes at zero temperature is predicted to be xc ~ 0.02, independently of any energy scales of the system.Comment: 4 pages with 3 figures included, minor revisions, to be published in PR

Avaliação nutricional e sensorial de barrinhas de cereais contendo suspensão de nanofibrilas de celulose de casca de pinhão.

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Medieneinsatz in der Eignungsdiagnostik:empirische Untersuchung zur Validität eines medial variierten Personalauswahlverfahrens

Die Anforderungen, welche an moderne Personalauswahlverfahren gestellt werden, sind vielschichtig. So sollten diese, neben einer hohen Objektivität, Zuverlässigkeit und Vorhersagegüte, auch in Bezug auf die wahrgenommene soziale Validität und Fairness höchsten Ansprüchen genügen. Einen möglichen Ansatz, um den oben genannten Forderungen gerecht zu werden, stellt der Einsatz von Multimedia dar. Mit der vorliegenden Arbeit wurde, motiviert durch positive Ergebnissen zu videobasierten SJTs, ein erster Versuch unternommen, eine Rollenspielübung in multimedialer, videobasierter Form abzubilden. Anhand des Vergleichs eines zu diesem Zweck konstruierten multimedialen Verfahrens mit einer herkömmlichen Rollenspielübung in Face-to-Face Form und einer Paper-Pencil Variante sollte die Frage beantwortet werden, inwieweit sich für das Rollenspiel eine Verbesserung der kriterienorientierten sowie der wahrgenommenen sozialen Validität und Fairness durch den Einsatz von Multimedia realisieren lässt