Effect of Phosphorus Nutrition on Growth and Physiology of Cotton Under Ambient and Elevated Carbon Dioxide

Phosphorous deficiency in soil limits crop growth and productivity in the majority of arable lands worldwide and may moderate the growth enhancement effect of rising atmospheric carbon dioxide (CO2) concentration. To evaluate the interactive effect of these two factors on cotton (Gossypium hirsutum) growth and physiology, plants were grown in controlled environment growth chambers with three levels of phosphate (Pi) supply (0.20, 0.05 and 0.01 mM) under ambient and elevated (400 and 800 μmol mol‒1, respectively) CO2. Phosphate stress caused stunted growth and resulted in early leaf senescence with severely decreased leaf area and photosynthesis. Phosphate stress led to over 77 % reduction in total biomass across CO2 levels. There was a below-ground (roots) shift in biomass partitioning under Pi deficiency. While tissue phosphorus (P) decreased, tissue nitrogen (N) content tended to increase under Pi deficiency. The CO2 × Pi interactions were significant on leaf area, photosynthesis and biomass accumulation. The stimulatory effect of elevated CO2 on growth and photosynthesis was reduced or highly depressed suggesting an increased sensitivity of cotton to Pi deficiency under elevated CO2. Although, tissue P and stomatal conductance were lower at elevated CO2, these did not appear to be the main causes of cotton unresponsiveness to elevated CO2 under severe Pi-stress. The alteration in the uptake and utilization of N was suggested due to a consistent reduction (18–21 %) in the cotton plant tissue N content under elevated CO2

Lateral Segregation of Photosystem I in Cyanobacterial Thylakoids

Photosystem I (PSI) is the dominant photosystem in cyanobacteria and it plays a pivotal role in cyanobacterial metabolism. Despite its biological importance, the native organisation of PSI in cyanobacterial thylakoid membranes is poorly understood. Here, we use atomic force microscopy (AFM) to show that ordered, extensive macromolecular arrays of PSI complexes are present in thylakoids from Thermosynechococcus (T.) elongatus, Synechococcus sp. PCC 7002 and Synechocystis sp PCC 6803. Hyperspectral confocal fluorescence microscopy (HCFM) and three-dimensional structured illumination microscopy (3D-SIM) of Synechocystis sp PCC 6803 cells visualise PSI domains within the context of the complete thylakoid system. Crystallographic and AFM data were used to build a structural model of a membrane landscape comprising 96 PSI trimers and 27,648 chlorophyll a molecules. Rather than facilitating inter-trimer energy transfer the close associations between PSI primarily maximise packing efficiency; short-range interactions with Complex I and cytochrome b6f are excluded from these regions of the membrane, so PSI turnover is sustained by long-distance diffusion of the electron donors at the membrane surface. Elsewhere, PSI-photosystem II (PSII) contact zones provide sites for docking phycobilisomes and the formation of megacomplexes. PSI-enriched domains in cyanobacteria might foreshadow the partitioning of PSI into stromal lamellae in plants, similarly sustained by long-distance diffusion of electron carriers

Statistical Analysis of Microarray Data with Replicated Spots: A Case Study with Synechococcus WH8102

Until recently microarray experiments often involved relatively few arrays with only a single representation of each gene on each array. A complete genome microarray with multiple spots per gene (spread out spatially across the array) was developed in order to compare the gene expression of a marine cyanobacterium and a knockout mutant strain in a defined artificial seawater medium. Statistical methods were developed for analysis in the special situation of this case study where there is gene replication within an array and where relatively few arrays are used, which can be the case with current array technology. Due in part to the replication within an array, it was possible to detect very small changes in the levels of expression between the wild type and mutant strains. One interesting biological outcome of this experiment is the indication of the extent to which the phosphorus regulatory system of this cyanobacterium affects the expression of multiple genes beyond those strictly involved in phosphorus acquisition

The ABCD of usability testing

We introduce a methodology for tracking and auditing feedback, errors and suggestions for software packages. This short paper describes how we innovate on the evaluation mechanism, introducing an (Antecedent, Barrier, Consequence and Development) ABCD form, embedded within an eParticipation platform to enable end users to easily report on any usability issues. This methodology will be utilised to improve the STEP cloud eParticipation platform (part of the current STEP Horizon2020 project http://step4youth.eu. The platform is currently being piloted in real life contexts, with the participation of public authorities that are integrating the eParticipation platform into their regular decision-making practices. The project is involving young people, through engagement and motivation strategies and giving them a voice in Environmental decision making at the local level. The pilot evaluation aims to demonstrate how open engagement needs to be embedded within public sector processes and the usability methodology reported here will help to identify the key barriers for wide scale deployment of the platform