778 research outputs found

    Performance analysis of pressurized irrigation systems operating on-demand using flow-driven simulation models

    Get PDF
    On-demand pressurized irrigation systems are designed to deliver water with the flow rate and pressure required by the farm irrigation systems, sprinkling or micro-irrigation, and respecting the time, duration and frequency decided by the farmers. Due to the variation in farm demand along the season and the day, a large spatial and temporal variability of flow regimes occurs in these systems, which may affect the performance of the farm systems and the yields of the irrigated crops. Therefore, there is a need to analyse those systems to identify and solve performance problems. In this research, two simulation models for the analysis of irrigation systems operating on-demand, ICARE and AKLA, are used and compared to assess the hydraulic performance of the irrigation network of the Lucefecit Irrigation System, in Southern Portugal. ICARE assesses the global performance of the irrigation system through the indexed characteristic curves, while AKLA provides for the identification of the relative pressure deficit and reliability at every hydrant. Both models adopt a flow-driven analysis approach, performing the analysis for multiple flow regimes. To support the hydraulic characterization of the system and for calibration of the steadystate hydraulic model, field measurements were performed at selected nodes of the network, including four hydrants. The analysis with ICARE does not provide for a sufficient identification of problems. In fact, poor performance is indicated when a few hydrants operate below the minimum pressure set at design. Differently, the analysis with AKLA, applied at the hydrant level, shows that the performance of the Lucefecit system is generally acceptable. AKLA identifies which hydrants operate below the required pressure and, therefore, allows to support any eventual related improvement. Results show that the performance of the system highly improved when changing the piezometric elevation from 260 to 265m a.s.l. However, this improvement is not sufficient because three hydrants still have high relative pressure deficit and low reliability. Solutions for those hydrants require increasing diameters of network pipes supplying them

    Micropropagation of a recalcitrant pine (Pinus pinea L.): An overview of the effects of ectomycorrhizal inoculation

    Get PDF
    Stone pine (Pinus pinea L.) is an economically important forest species in some regions of Iberian Peninsula. Portugal and Spain have nearly 500,000 ha of stone pine stands, representing 85% of worldwide distribution. The main use of this species is for the production of seeds (pinion) for food industry. In addition to its enormous profitability as a producer of seeds, it has beneficial impact on soil protection, dunes fixation and is a pioneer species particularly for cork and holm oaks degraded ecosystems. Stone pine plantations are today a major source of income for forestry holdings. Investments have targeted breeding, reforestation, forest management and harvesting. The maternal inheritance of desirable characteristics such as cone weight, number of seeds per cone and seed length is considerably high in this species thus encouraging the selection of seeds from “plus” trees. The selected trees have been propagated by grafting and micropropagation. However, grafting generates high variability due to scion-rootstock interaction that varies production levels. The production of clonal plants from selected seeds by micropropagation techniques has advanced very slowly due to the recalcitrance of this species in tissue culture and particularly to adventitious rooting of microshoots. Due to the tremendous importance of developing a reproducible tissue culture method for clonal propagation, a study has been carried out for over a decade to enhance rooting and acclimation. During this period of time, continuous increments in the multiplication rate and rooting frequency were achieved by introducing variations in culture media composition and conditions. Auxins, carbohydrates, light quality and duration, temperature at different concentrations and levels as well as compounds such as coumarin; salicylic acid, polyamines, etc. were tested for induction and expression phases of adventitious rooting. Despite these efforts, microshoots regenerated through organogenesis from mature embryo cotyledons failed to root or to have sustained root growth. At this point, an in vitro co-culture technique of stone pine microshoots with ectomycorrhizal-fungi was introduced to overcome the adventitious root growth cessation in vitro and improve root development during acclimation phase. An overview of the results showing the positive effect of fungal inoculation in promoting root growth in vitro and on plantlet survival during acclimation will be presented. Preliminary results of biochemical signals between Pinus pinea/Pisolithus arhizus during early steps of in vitro culture detected by liquid chromatography-mass spectrometry that might be responsible for the positive effect on root growth will be also presented

    Hypoxia Inhibits Hypertrophic Differentiation and Endochondral Ossification in Explanted Tibiae

    Get PDF
    Purpose: Hypertrophic differentiation of growth plate chondrocytes induces angiogenesis which alleviates hypoxia normally present in cartilage. In the current study, we aim to determine whether alleviation of hypoxia is merely a downstream effect of hypertrophic differentiation as previously described or whether alleviation of hypoxia and consequent changes in oxygen tension mediated signaling events also plays an active role in regulating the hypertrophic differentiation process itself. Materials and Methods: Fetal mouse tibiae (E17.5) explants were cultured up to 21 days under normoxic or hypoxic conditions (21% and 2.5% oxygen respectively). Tibiae were analyzed on growth kinetics, histology, gene expression and protein secretion. Results: The oxygen level had a strong influence on the development of explanted fetal tibiae. Compared to hypoxia, normoxia increased the length of the tibiae, length of the hypertrophic zone, calcification of the cartilage and mRNA levels of hypertrophic differentiation-related genes e.g. MMP9, MMP13, RUNX2, COL10A1 and ALPL. Compared to normoxia, hypoxia increased the size of the cartilaginous epiphysis, length of the resting zone, calcification of the bone and mRNA levels of hyaline cartilage-related genes e.g. ACAN, COL2A1 and SOX9. additionally, hypoxia enhanced the mRNA and protein expression of the secreted articular cartilage markers GREM1, FRZB and DKK1, which are able to inhibit hypertrophic differentiation. Conclusions: Collectively our data suggests that oxygen levels play an active role in the regulation of hypertrophic differentiation of hyaline chondrocytes. Normoxia stimulates hypertrophic differentiation evidenced by the expression of hypertrophic differentiation related genes. In contrast, hypoxia suppresses hypertrophic differentiation of chondrocytes, which might be at least partially explained by the induction of GREM1, FRZB and DKK1 expressio

    Effect of lunging exercise program with Pessoa training aid on cardiac physical conditioning predictors in adult horses

    Get PDF
    ABSTRACT The aim of this study was to evaluate the effect the Pessoa training aid (PTA) exercise program exerts in some physical conditioning predictors. Eight detrained adult horses were evaluated in 12 sessions of work with PTA (3 sessions per week). All horses used a heart rate monitor and GPS (V800, Polar Electro) and data was used to calculate energy expenditure (EE), net cost of transport (COT), metabolic energy requirement (Pmet), oxygen pulse, oxygen utilization, heart rate and heart rate variability (HRV). The horses were weighted, and the thoracolumbar shape were measured at the level of the 18th (T18), 13th (T13) and 8th (T8) thoracic vertebrae with a flexible ruler before and after the experimental period. Data obtained weekly were submitted to ANOVA and Tukey test (p≤0.05). Data obtained just before and after the experimental period were submitted to paired t test. There was a decrease in left-right asymmetry. In the third week there was an increase in HR, EE, oxygen pulse and oxygen utilization followed by a decrease in the fourth week. The biomechanics related parameters, COT and Pmet decreased week by week. The HRV showed a sympathetic stimulus in the third week followed by a shift to parasympathetic in the fourth week. We conclude that 12 sessions of lunge exercise with PTA contributed to physical condition improvement

    High throughput generated micro-aggregates of chondrocytes stimulate cartilage formation in vitro and in vivo

    Get PDF
    Cell-based cartilage repair strategies such as matrix-induced autologous chondrocyte implantation (MACI) could be improved by enhancing cell performance. We hypothesised that micro-aggregates of chondrocytes generated in high-throughput prior to implantation in a defect could stimulate cartilaginous matrix deposition and remodelling. To address this issue, we designed a micro-mould to enable controlled high-throughput formation of micro-aggregates. Morphology, stability, gene expression profiles and chondrogenic potential of micro-aggregates of human and bovine chondrocytes were evaluated and compared to single-cells cultured in micro-wells and in 3D after encapsulation in Dextran-Tyramine (Dex-TA) hydrogels in vitro and in vivo. We successfully formed micro-aggregates of human and bovine chondrocytes with highly controlled size, stability and viability within 24 hours. Micro-aggregates of 100 cells presented a superior balance in Collagen type I and Collagen type II gene expression over single cells and micro-aggregates of 50 and 200 cells. Matrix metalloproteinases 1, 9 and 13 mRNA levels were decreased in micro-aggregates compared to single-cells. Histological and biochemical analysis demonstrated enhanced matrix deposition in constructs seeded with micro-aggregates cultured in vitro and in vivo, compared to single-cell seeded constructs. Whole genome microarray analysis and single gene expression profiles using human chondrocytes confirmed increased expression of cartilage-related genes when chondrocytes were cultured in micro-aggregates. In conclusion, we succeeded in controlled high-throughput formation of micro-aggregates of chondrocytes. Compared to single cell-seeded constructs, seeding of constructs with micro-aggregates greatly improved neo-cartilage formation. Therefore, micro-aggregation prior to chondrocyte implantation in current MACI procedures, may effectively accelerate hyaline cartilage formation

    Role of the chemokines CCL3/MIP-1α and CCL5/RANTES in sponge-induced inflammatory angiogenesis in mice

    Get PDF
    Barcelos, Luciola S Coelho, Amanda M Russo, Remo C Guabiraba, Rodrigo Souza, Adriano L S Bruno-Lima, Guilherme Jr Proudfoot, Amanda E I Andrade, Silvia P Teixeira, Mauro M Microvasc Res. 2009 Sep;78(2):148-54. doi: 10.1016/j.mvr.2009.04.009. Epub 2009 May 8.; International audience; OBJECTIVE: We examined the potential contribution of CCL3 and CCL5 to inflammatory angiogenesis in mice. METHODS: Polyester-polyurethane sponges were implanted in mice and blood vessel counting and hemoglobin, myeloperoxidase and N-acetylglucosaminidase measurements used as indexes for vascularization, neutrophil and macrophage accumulation, respectively. RESULTS: CCL3 and CCL5 were expressed throughout the observation period. Exogenous CCL3 enhanced angiogenesis in WT, but angiogenesis proceeded normally in CCL3(-/-) mice, suggesting that endogenous CCL3 is not critical for sponge-induced angiogenesis in mice. CCL5 expression was detected at day 1, but levels significantly increased thereafter. Exogenous CCL5 reduced angiogenesis in WT mice possible via CCR5 as CCL5 was without an effect in CCR5(-/-) mice. Treatment of WT with the CCR1/CCR5 antagonist, Met-RANTES, prevented neutrophil and macrophage accumulation, but enhanced sponge vascularization. CONCLUSION: Thus, endogenous CCL3 appears not to play a role in driving sponge-induced inflammatory angiogenesis in mice. The effects of CCL5 were anti-angiogenic and appeared to be mediated via activation of CCR5

    Saccharomyces Cerevisiae Transcriptional Reprograming Due To Bacterial Contamination During Industrial Scale Bioethanol Production

    Get PDF
    Background: The bioethanol production system used in Brazil is based on the fermentation of sucrose from sugarcane feedstock by highly adapted strains of the yeast Saccharomyces cerevisiae. Bacterial contaminants present in the distillery environment often produce yeast-bacteria cellular co-aggregation particles that resemble yeast-yeast cell adhesion (flocculation). The formation of such particles is undesirable because it slows the fermentation kinetics and reduces the overall bioethanol yield. Results: In this study, we investigated the molecular physiology of one of the main S. cerevisiae strains used in Brazilian bioethanol production, PE-2, under two contrasting conditions: typical fermentation, when most yeast cells are in suspension, and co-aggregated fermentation. The transcriptional profile of PE-2 was assessed by RNA-seq during industrial scale fed-batch fermentation. Comparative analysis between the two conditions revealed transcriptional profiles that were differentiated primarily by a deep gene repression in the co-aggregated samples. The data also indicated that Lactobacillus fermentum was likely the main bacterial species responsible for cellular co-aggregation and for the high levels of organic acids detected in the samples. Conclusions: Here, we report the high-resolution gene expression profiling of strain PE-2 during industrial-scale fermentations and the transcriptional reprograming observed under co-aggregation conditions. This dataset constitutes an important resource that can provide support for further development of this key yeast biocatalyst.141Basso, L.C., Amorim, H.V., Oliveira, A.J., Lopes, M.L., Yeast selection for fuel ethanol production in Brazil (2008) FEMS Yeast Res, 8, pp. 1155-1163Carvalho-Netto, O.V., Carazzolle, M.F., Rodrigues, A., Bragança, W.O., Costa, G.G.L., Argueso, J.L., A simple and effective set of PCR-based molecular markers for the monitoring of the Saccharomyces cerevisiae cell population during bioethanol fermentation (2013) J Biotechnol, 168, pp. 701-709Silva-Filho, E.A., Santos, S.K.B., Resende, A.D.M., Morais, J.O.F., Morais, M.A., Ardaillon Simões, D., Yeast population dynamics of industrial fuel-ethanol fermentation process assessed by PCR-fingerprinting (2005) Antonie Van Leeuwenhoek, 88, pp. 13-23Argueso, J.L., Carazzolle, M.F., Mieczkowski, P.A., Duarte, F.M., Carvalho-Netto, O.V., Missawa, S.K., Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production (2009) Genome Res, 19, pp. 2258-2270Soares, E.V., Flocculation in Saccharomyces cerevisiae: a review (2011) J Appl Microbiol, 110, pp. 1-18Verstrepen, K.J., Klis, F.M., Flocculation, adhesion and biofilm formation in yeasts (2006) Mol Microbiol, 60, pp. 5-15Amorim, H.V., Lopes, M.L., Castro Oliveira, J.V., Buckeridge, M.S., Goldman, G.H., Scientific challenges of bioethanol production in Brazil (2011) Appl Microbiol Biotechnol, 91, pp. 1267-1275Abreu-Cavalheiro, A., Monteiro, G., Solving ethanol production problems with genetically modified yeast strains (2014) Braz J Microbiol, 44 (3), pp. 665-671Lucena, B.T.L., dos Santos, B.M., Moreira, J.L., Moreira, A.P.B., Nunes, A.C., Azevedo, V., Diversity of lactic acid bacteria of the bioethanol process (2010) BMC Microbiol, 10, p. 298Yokoya, F., Oliva-Neto, P., Características da floculação de leveduras por Lactobacillus fermentum (1991) Brazilian J Microbiol, 22, pp. 12-16Tiukova, I., Eberhard, T., Passoth, V., Interaction of Lactobacillus vini with the ethanol-producing yeasts Dekkera bruxellensis and Saccharomyces cerevisiae (2014) Biotechnol Appl Biochem, 61, pp. 40-44Pretzer, G., Snel, J., Molenaar, D., Biodiversity-based identification and functional characterization of the mannose-specific adhesin of Lactobacillus plantarum (2005) J Bacteriol, 187, pp. 6128-6136Furukawa, S., Nojima, N., Nozaka, S., Hirayama, S., Satoh, A., Ogihara, H., Mutants of Lactobacillus plantarum ML11-11 deficient in co-aggregation with yeast exhibited reduced activities of mixed-species biofilm formation (2012) Biosci Biotechnol Biochem, 76, pp. 326-330Turner, M.S., Hafner, L.M., Walsh, T., Giffard, P.M., Peptide surface display and secretion using two LPXTG-containing surface proteins from Lactobacillus fermentum BR11 (2003) Appl Environ Microbiol, 69, pp. 5855-5863Hirayama, S., Furukawa, S., Ogihara, H., Morinaga, Y., Yeast mannan structure necessary for co-aggregation with Lactobacillus plantarum ML11-11 (2012) Biochem Biophys Res Commun, 419, pp. 652-655Rayner, J.C., Munro, S., Identification of the MNN2 and MNN5 mannosyltransferases required for forming and extending the mannose branches of the outer chain mannans of Saccharomyces cerevisiae (1998) J Biol Chem, 273, pp. 26836-26843Abbott, D.A., Zelle, R.M., Pronk, J.T., Maris, A.J.A., Metabolic engineering of Saccharomyces cerevisiae for production of carboxylic acids: current status and challenges (2009) FEMS Yeast Res, 9, pp. 1123-1136Dorta, C., Oliva-Neto, P., Abreu-Neto, M.S., Nicolau-Junior, N., Nagashima, A.I., Synergism among lactic acid, sulfite, pH and ethanol in alcoholic fermentation of Saccharomyces cerevisiae (PE-2 and M-26) (2005) World J Microbiol Biotechnol, 22, pp. 177-182Kawahata, M., Masaki, K., Fujii, T., Iefuji, H., Yeast genes involved in response to lactic acid and acetic acid: acidic conditions caused by the organic acids in Saccharomyces cerevisiae cultures induce expression of intracellular metal metabolism genes regulated by Aft1p (2006) FEMS Yeast Res, 6, pp. 924-936Thomas, K.C., Hynes, S.H., Ingledew, W.M., Influence of medium buffering capacity on inhibition of Saccharomyces cerevisiae growth by acetic and lactic acids (2002) Appl Environ Microbiol, 68, pp. 1616-1623Narendranath, N.V., Thomas, K.C., Ingledew, W.M., Effects of acetic acid and lactic acid on the growth of Saccharomyces cerevisiae in a minimal medium (2001) J Ind Microbiol Biotechnol, 26, pp. 171-177Argueso, J.L., Pereira, G.A.G., Perspective: Indigenous sugarcane yeast strains as ideal biological platforms for the delivery of next generation biorefining technologies (2010) Int Sugar J, 112, pp. 86-89Pruesse, E., Quast, C., Knittel, K., Fuchs, B.M., Ludwig, W., Peplies, J., SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB (2007) Nucleic Acids Res, 35, pp. 7188-7196Bakker, B.M., Overkamp, K.M., Maris, A.J., Kötter, P., Luttik, M.A., Dijken, J.P., Stoichiometry and compartmentation of NADH metabolism in Saccharomyces cerevisiae (2001) FEMS Microbiol Rev, 25, pp. 15-37Nevoigt, E., Stahl, U., Osmoregulation and glycerol metabolism in the yeast Saccharomyces cerevisiae (1997) FEMS Microbiol Rev, 21, pp. 231-241Ishida, N., Saitoh, S., Ohnishi, T., Tokuhiro, K., Nagamori, E., Kitamoto, K., Metabolic engineering of Saccharomyces cerevisiae for efficient production of pure L-(+)-lactic acid (2006) Appl Biochem Biotechnol, 131, pp. 795-807Oliva-Neto, P., Yokoya, F., Evaluation of bacterial contamination in a fed-batch alcoholic fermentation process (1994) World J Microbiol Biotechnol, 10, pp. 697-699Geng, F., Laurent, B.C., Roles of SWI/SNF and HATs throughout the dynamic transcription of a yeast glucose-repressible gene (2004) EMBO J, 23, pp. 127-137Ozcan, S., Vallier, L.G., Flick, J.S., Carlson, M., Johnston, M., Expression of the SUC2 gene of Saccharomyces cerevisiae is induced by low levels of glucose (1997) Yeast, 13, pp. 127-137Basso, L.C., Basso, T.O., Rocha, S.N., Ethanol production in Brazil: the industrial process and its impact on yeast fermentation (2010) Biofuel Production - Recent Developments and Prospects, 1, pp. 85-100. , Bernardes MAS, editor. Rijeka: InTechPiper, P., Ortiz Calderon, C., Hatzixanthis, K., Mollapour, M., Weak acid adaptationthe stress response that confers yeasts with resistance to organic acid food preservatives (2001) Microbiology, 147, pp. 2635-2642Serrano, R., Kielland-Brandt, M.C., Fink, G.R., Yeast plasma membrane ATPase is essential for growth and has homology with (Na+ + K+), K+- and Ca2+-ATPases (1986) Nature, 319, pp. 689-693Abbott, D.A., Knijnenburg, T.A., Poorter, L.M.I., Reinders, M.J.T., Pronk, J.T., Maris, A.J., Generic and specific transcriptional responses to different weak organic acids in anaerobic chemostat cultures of Saccharomyces cerevisiae (2007) FEMS Yeast Res, 7, pp. 819-833Abbott, D.A., Suir, E., Maris, A.J.A., Pronk, J.T., Physiological and transcriptional responses to high concentrations of lactic acid in anaerobic chemostat cultures of Saccharomyces cerevisiae (2008) Appl Environ Microbiol, 74, pp. 5759-5768Fernandes, A.R., Mira, N.P., Vargas, R.C., Canelhas, I., Sá-Correia, I., Saccharomyces cerevisiae adaptation to weak acids involves the transcription factor Haa1p and Haa1p-regulated genes (2005) Biochem Biophys Res Commun, 337, pp. 95-103Mira, N.P., Becker, J.D., Sá-Correia, I., Genomic expression program involving the Haa1p-regulon in Saccharomyces cerevisiae response to acetic acid (2010) OMICS, 14, pp. 587-601Mira, N.P., Palma, M., Guerreiro, J.F., Sá-Correia, I., Genome-wide identification of Saccharomyces cerevisiae genes required for tolerance to acetic acid (2010) Microb Cell Fact, 9, p. 79Grant, C.M., MacIver, F.H., Dawes, I.W., Glutathione is an essential metabolite required for resistance to oxidative stress in the yeast Saccharomyces cerevisiae (1996) Curr Genet, 29, pp. 511-515Stephen, D.W., Jamieson, D.J., Glutathione is an important antioxidant molecule in the yeast Saccharomyces cerevisiae (1996) FEMS Microbiol Lett, 141, pp. 207-212Grant, C.M., Role of the glutathione/glutaredoxin and thioredoxin systems in yeast growth and response to stress conditions (2001) Mol Microbiol, 39, pp. 533-541Wheeler, G.L., Trotter, E.W., Dawes, I.W., Grant, C.M., Coupling of the transcriptional regulation of glutathione biosynthesis to the availability of glutathione and methionine via the Met4 and Yap1 transcription factors (2003) J Biol Chem, 278, pp. 49920-49928Dormer, U.H., Westwater, J., McLaren, N.F., Kent, N.A., Mellor, J., Jamieson, D.J., Cadmium-inducible expression of the yeast GSH1 gene requires a functional sulfur-amino acid regulatory network (2000) J Biol Chem, 275, pp. 32611-32616Abbott, D.A., Suir, E., Duong, G.-H., Hulster, E., Pronk, J.T., Maris, A.J., Catalase overexpression reduces lactic acid-induced oxidative stress in Saccharomyces cerevisiae (2009) Appl Environ Microbiol, 75, pp. 2320-2325Ludovico, P., Rodrigues, F., Almeida, A., Silva, M.T., Barrientos, A., Côrte-Real, M., Cytochrome c release and mitochondria involvement in programmed cell death induced by acetic acid in Saccharomyces cerevisiae (2002) Mol Biol Cell, 13, pp. 2598-2606Rodríguez-Navarro, S., Llorente, B., Rodríguez-Manzaneque, M.T., Ramne, A., Uber, G., Marchesan, D., Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6 (2002) Yeast, 19, pp. 1261-1276Padilla, P.A., Fuge, E.K., Crawford, M.E., Errett, A., Werner-Washburne, M., The highly conserved, coregulated SNO and SNZ gene families in Saccharomyces cerevisiae respond to nutrient limitation (1998) J Bacteriol, 180, pp. 5718-5726Ehrenshaft, M., Bilski, P., Li, M.Y., Chignell, C.F., Daub, M.E., A highly conserved sequence is a novel gene involved in de novo vitamin B6 biosynthesis (1999) Proc Natl Acad Sci U S A, 96, pp. 9374-9378Stambuk, B.U., Dunn, B., Alves, S.L., Duval, E.H., Sherlock, G., Industrial fuel ethanol yeasts contain adaptive copy number changes in genes involved in vitamin B1 and B6 biosynthesis (2009) Genome Res, 19, pp. 2271-2278Hoffman, C.S., Preparation of yeast DNA (2001) Current Protocols in Molecular Biology, pp. 13-21. , Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K, editors. New York: John Wiley & SonsCollart, M.A., Oliviero, S., Preparation of Yeast RNA (2001) Current Protocols in Molecular Biology, pp. 13-22. , Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K, editors. New York: John Wiley & SonsLi, R., Li, Y., Kristiansen, K., Wang, J., SOAP: short oligonucleotide alignment program (2008) Bioinformatics, 24, pp. 713-714Wang, L., Feng, Z., Wang, X., Wang, X., Zhang, X., DEGseq: an R package for identifying differentially expressed genes from RNA-seq data (2010) Bioinformatics, 26, pp. 136-138Mortazavi, A., Williams, B.A., Mccue, K., Schaeffer, L., Wold, B., Mapping and quantifying mammalian transcriptomes by RNA-Seq (2008) Nat Methods, 5, pp. 1-8Sharan, R., Maron-Katz, A., Shamir, R., CLICK and EXPANDER: a system for clustering and visualizing gene expression data (2003) Bioinformatics, 19, pp. 1787-1799Livak, K.J., Schmittgen, T.D., Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method (2001) Methods, 25, pp. 402-408Cui, P., Lin, Q., Ding, F., Xin, C., Gong, W., Zhang, L., A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing (2010) Genomics, 96, pp. 259-265Heuer, H., Krsek, M., Baker, P., Smalla, K., Wellington, E.M., Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients (1997) Appl Environ Microbiol, 63, pp. 3233-324

    Oral treatment with Saccharomyces cerevisiae strain UFMG 905 modulates immune responses and interferes with signal pathways involved in the activation of inflammation in a murine model of typhoid fever

    Get PDF
    AbstractSalmonella spp. are Gram-negative, facultative, intracellular pathogens that cause several diarrheal diseases ranging from self-limiting gastroenteritis to typhoid fever. Previous results from our laboratory showed that Saccharomyces cerevisiae strain UFMG 905 isolated from ‘cachaça’ production presented probiotic properties due to its ability to protect against experimental infection with Salmonella enterica serovar Typhimurium. In this study, the effects of oral treatment with S. cerevisiae 905 were evaluated at the immunological level in a murine model of typhoid fever. Treatment with S. cerevisiae 905 inhibited weight loss and increased survival rate after Salmonella challenge. Immunological data demonstrated that S. cerevisiae 905 decreased levels of proinflammatory cytokines and modulated the activation of mitogen-activated protein kinases (p38 and JNK, but not ERK1/2), NF-κB and AP-1, signaling pathways which are involved in the transcriptional activation of proinflammatory mediators. Experiments in germ-free mice revealed that probiotic effects were due, at least in part, to the binding of Salmonella to the yeast. In conclusion, S. cerevisiae 905 acts as a potential new biotherapy against S. Typhimurium infection due to its ability to bind bacteria and modulate signaling pathways involved in the activation of inflammation in a murine model of typhoid fever
    corecore