Fishes from the rio da Dona, a threatened environment in the Recôncavo Sul basin, Bahia, Brazil

The rio da Dona is an important water body in the Recôncavo Sul basin used as a water supply for the neighboring towns and for agriculture, recreation and subsistence fishing. The knowledge about the ichthyofauna of this river is scarce. In this paper, an inventory of the fish fauna from rio da Dona basin and an identification key for the species recorded are presented. Additionally, taxonomic and conservationist issues are discussed. The specimens were collected in different sites along the upper, middle and lower courses of the rio da Dona. The fishes were anesthetized, fixed in formalin, conserved in ethanol, and identified. In addition to the material collected, specimens previously deposited in the ichthyological collection of the Museu de História Natural da Bahia were also analyzed. Twenty species, distributed into 16 genera, ten families, and four orders were recorded. One of these species, Aspidoras kiriri, is endemic to the rio da Dona. Four species, Cichla pinima, Coptodon rendalli, Poecilia reticulata and Serrasalmus brandtii, have been introduced into the river. Higher richness of native species has been recorded in the upper course of the rio da Dona, while in the middle and lower parts non-native species were also representative. Along the river, a series of anthropic impacts were observed, such as deforestation of native forest including the riparian vegetation, silting and dams, which can probably compromised the resident ichthyofauna

Identificação por "Multiplex PCR" do sorotipo monofásico e atípico Salmonella enterica subsp. enterica sorotipo 1,4,[5],12:i:-, no Estado de São Paulo, Brasil: freqüência e resistência antimicrobiana

Salmonella spp. are the etiologic agents of salmonellosis, a worldwide spread zoonoses causing foodborne outbreaks and clinical diseases. By serological identification, Salmonella enterica subsp. enterica serotype 1,4,[5],12:i:- accounted for 8.8% of human and 1.6% of nonhuman Salmonella strains isolated in São Paulo State, during 1991-2000. A total of 28.6% of them amplified a fragment corresponding to H:1,2 (flagellar phase two) through PCR analysis and were further assigned as S. Typhimurium. Antimicrobial resistance was detected in 36.3% of the 369 PCR-negative strains tested, including the multiresistance to ampicillin, chloramphenicol, sulfonamides, tetracycline, and streptomycin.Salmonella spp. é o agente etiológico da salmonelose, zoonose mundialmente distribuída e responsável por surtos de doenças transmitidas por alimentos e doenças clínicas. Sorologicamente, Salmonella enterica subsp. enterica sorotipo 1,4,[5],12:i:- correspondeu a 8,8% e 1,6% das cepas de Salmonella de origem humana e não-humana, respectivamente, isoladas no Estado de São Paulo, no decênio 1991-2000. Aproximadamente 28,6% destas cepas amplificaram o fragmento correspondente a H:1,2 (fase flagelar dois) em testes de PCR e foram, então, identificadas como S. Typhimurium. Das 369 cepas negativas em PCR, 36,3% apresentou resistência antimicrobiana, incluindo multirresistência a ampicilina, cloranfenicol, sulfonamidas, tetraciclina e estreptomicina

Detection of cytotoxic necrotizing factor types 1 and 2 among fecal Escherichia coli isolates from brazilian children with and without diarrhea

The enteropathogenic role of cytotoxic necrotizing factor (CNF)-producing Escherichia coli was investigated by searching cnf genes among 2074 isolates from 200 children with and 200 without acute diarrhea in Brazil. Fourteen (7%) cases versus 10 (5%) control children carried at least one cnf positive isolate (P = 0.50) and most isolates expressed CNF type 1. DNA sequences of virulence factors of extraintestinal pathogenic E. coli (ExPEC) were detected in 78.6% of CNF1-producing isolates. Besides not being associated with human acute diarrhea, the CNF1-producing isolates here identified may represent potential ExPEC transitorily composing the normal intestinal flora.Instituto Adolfo Lutz Seção de BacteriologiaUniversidade Federal de São Paulo (UNIFESP), Escola Paulista de Medicina (EPM) Departamento de Microbiologia, Imunologia e ParasitologiaUNIFESP, EPM, Depto. de Microbiologia, Imunologia e ParasitologiaSciEL

Stool processing-methods for Salmonella enterica isolation and PCR detection

The aim of this study was to compare the efficiency of three protocols for bacteriological isolation of Salmonella enterica and detection by PCR in swine feces samples. Pool of feces (n=62) were processed by three different methods. Method 1: samples (10g) were pre-enriched in BPW (1:10) and enriched in Rappaport-Vassiliadis broth (1:100). Method 2: samples (1g) were first enriched in GN-Hajna broth (1:10) and secondly enriched in Muller-Kaufmann tetrathionate broth (1`:10). Method 3: Single step enrichment of feces (1g) in selenite-cystine broth (1:10). PCR was performed using DNA extracted from the last enrichment broth of each bacteriological method. Salmonella enterica was cultured from 13 out of 62 samples (20.9%) and seven different serotypes were isolated. The methods 1, 2 and 3 resulted in 9 (14.5%), 6 (9.6%) and 2 (3.2%) positive samples, respectively. PCR was significantly superior than conventional bacteriology for Salmonella detection only when Rappaport-Vassiliadis was used for DNA-template preparation

Salmonella Typhimurium CARRIAGE at slaughter AFTER an enterocolitis outbreak in a swine herd

The aim of this study was to estimate the prevalence of slaughter pigs carrying Salmonella Typhimurium after a entericolitis outbreak in a commercial pig farm. A cross-sectional study was done during the slaughter of a batch of 86 animals. Mesenteric lymph nodes from 43 pigs were collected and pre-enriched in buffered peptone water (1:10) overnight at 37∞C Afterwards, aliquots of 1mL and 0.1mL were transferred to selenite-cystine and Rappaport-Vassiliadis broth, respectively. A loopful of each sample was streaked onto XLT4 and brilliant green agar plates, which were incubated at 37∞C for 24 hours. Salmonella was cultured in 23 out of 43 collected samples (53.48%). Salmonella Typhimurim (13 strains) and Salmonella enterica subs. enterica 1,4,5,12:i:- (10 strains) were isolated. These results indicated that the slaughter of pigs from batches previously affected by enteric salmonellosis may represent a high risk for pork contamination, since there is an positive association between infected pigs before slaughter and carcass contamination

CONHECIMENTO ICTIOPARASITOLÓGICO TRADICIONAL DOS PESCADORES ARTESANAIS DO RIO JAGUARIPE, BAHIA, NORDESTE DO BRASIL

A etnoparasitologia é uma área de estudo que relaciona-se diretamente com a etnoecologia uma vez que, por definição, o parasitismo é considerado uma das relações simbióticas entre seres vivos. A ictioparasitologia pode ser estudada sob este prisma, avaliando-se o modo como as populações ribeirinhas compreendem as doenças parasitárias dos animais dos quais dependem para sua subsistência. Esta pesquisa objetivou analisar o conhecimento tradicional de pescadores dos municípios de Nazaré e Jaguaripe, Bahia, que realizam pesca no Rio Jaguaripe, sobre as interações peixes-parasitos, visando observar a percepção da ocorrência de parasitos, da influência desses organismos sobre os peixes, da dinâmica do parasitismo (sazonalidade, ciclo de vida) e da relação dos parasitos de peixes com o ser humano e com possíveis zoonoses. A seleção dos pescadores deu-se por amostragem tipo bola de neve e a coleta de dados por meio de questionário aberto e semiestruturado. Foram entrevistados 27 pescadores sendo os dados analisados qualitativamente e quantitativamente. Os resultados obtidos de ambas as comunidades apontam para um conhecimento de pelo menos dois grupos zoológicos de parasitos: Crustacea e Nematoda. Indicam reconhecimento de aspectos como sazonalidade, patologias e biologia parasitária. Também demonstrou que os pescadores percebem parasitos principalmente daqueles peixes de interesse comercial e não consideram a possibilidade de parasitos de peixes causarem doenças em humanos

Sorovares de Salmonella isolados de humanos no Estado de São Paulo, Brasil, 1996-2003

A salmonelose permanece uma importante causa de doença diarréica em humanos no Estado de São Paulo, Brasil. Nesse estudo foram identificados 3554 isolados de Salmonella de infecções humanas, durante o período 1996-2003. Entre os 68 diferentes sorovares determinados, S. Enteritidis foi predominante em infecções gastrointestinais e extra-intestinais, responsável por 67.4% de todos os isolados. S. Typhimurium e S. enterica subsp. enterica (4,5,12:i:-) foram mais freqüentemente isolados de crianças com idade de < 1 a 4 anos, em contraste, infecções por S. Enteritidis foram predominantes em pessoas entre 20 e 50 anos. A contínua vigilância laboratorial das salmoneloses, incluindo a sorotipagem, tem evidenciado os sorovares de Salmonella causando infecções humanas em nossa área geográfica ao longo do tempo.Salmonellosis remains an important cause of diarrheal illness in humans in São Paulo State, Brazil. In this study were identified 3554 Salmonella isolates from human infections, during the period 1996-2003. Among 68 different serovars determined, S. Enteritidis was the most frequent one in gastrointestinal and extra-intestinal infections accounting for 67.4% of all isolates. S. Typhimurium and S. enterica subsp. enterica (4,5,12:i:-) were most frequently isolated from children aged < 1-4 year-old, in contrast, people with S. Enteritidis infections were most likely to be 20-50 year-old. In our geographic area the continued laboratorial surveillance of salmonellosis, including serotyping, has showed the trends in Salmonella serovars causing infections in humans throughout the time

Salmonella enterica serotypes from human and nonhuman sources in Sao Paulo State, Brazil, 2004-2020

Salmonellosis ranks among the most frequently reported zoonosis worldwide and is often associated with foodborne outbreaks. Since the 1950s, the distribution of Salmonella serotypes in Sao Paulo State, Brazil, has been documented and periodically reported. In this study, we updated the data on the distribution of Salmonella serotypes received in our reference laboratory, isolated from human infections and nonhuman sources, from 2004 to 2020. In that period, a total of 9,014 Salmonella isolates were analyzed, of which 3,553 (39.4%) were recovered from human samples, mainly of stool (65%) and blood (25.6%), and 5,461 (60.6%) were isolated from nonhuman origins, such as animals (47.2%), food (27.7%) and animal environments (18.6%). In human isolates, a total of 104 serotypes were identified and the most frequent ones were Enteritidis, Typhimurium, S . I. 4,[5],12:i:-, Dublin and Typhi. A consistent reduction of the Enteritidis proportion was observed over the years. Among the 156 serotypes identified in isolates with nonhuman origins, Enteritidis, Mbandaka, Typhimurium, Agona and Anatum were ranked as the top five Salmonella serotypes; in more recent years, S . Heidelberg has increased in frequency. Although with different proportions, the top 10 prevalent serotypes were identified in both human and nonhuman origins, underscoring the role of animals, food products and environment as reservoirs of Salmonella with potential to cause human salmonellosis

Surto alimentar por Salmonella Enteritidis no Noroeste do Estado de São Paulo, Brasil

A foodborne outbreak which affected 211 persons occurred, in a School, in 1993. The epidemiological data obtained by interviewing the affected and non affected persons sampled showed as predominant symptoms: diarrhoea, fever (77.7%), abdominal cramps (67.7%), vomiting (65.8%), hot-and-cold sensations (54.5%) and headache (44.5%). The median incubation period was of 17 hours, the limits being 3 and 29 hours. The disease period was of from 3 to 4 days. The food concerned was a kind of paté, a mayonnaise mixture prepared with fresh eggs with boiled potatoes that was consumed with bread. The biological material analysis - 3 coprocultures, and leftovers of the food revealed the presence of one and the same organism: Salmonella Enteritidis. In the food, the numbers of this bacterium per gram were sufficient to account for the manifestation of the disease (104 and 105/g). The antibiogram of all the isolates showed the same sensibility pattern. The preparation related to this outbreak suggests the endogenous contamination of the eggs; the cross contamination - the outbreak affected three school periods, as the food was prepared separately for each school period; and the conditions under which the food was kept during the time from preparation to consumption. The observation of the 3 food handlers, by successive coprocultures, for one week, indicates that they were not asymptomatic carriers nor were they affected as a result of this outbreak by the causal bacteria.Em 1993 ocorreu um surto alimentar em escola, com 211 afetados. Os dados epidemiológicos levantados por entrevista de amostragem de afetados e não afetados mostraram que os sintomas predominantes foram diarréia, febre (77,7%), dor abdominal (67,7%), vômito (65,8%), calafrios (54,5%) e cefaléia (44,5%). A mediana de incubação foi de 17 horas, com limites entre 3 e 29 horas. A duração da doença foi de 3 a 4 dias. O alimento consumido foi um tipo de patê, mistura de molho de maionese preparada com ovos crus com batata cozida, passado em pão. A análise de material biológico (3 coproculturas) e de restos de alimentos revelou a presença do mesmo microrganismo, a Salmonella Enteritidis. No caso dos alimentos, o número encontrado desta bactéria por gramo de produto era compatível com a quantidade de células necessária para desencadear a doença (10(4)e 10(5)/g). O antibiograma de todas as cepas isoladas revelou o mesmo padrão de sensibilidade. As falhas no preparo do alimento relacionadas com o levantamento indicam a possibilidade de contaminação endógena dos ovos; contaminação cruzada - o surto afetou três períodos escolares, sendo que para cada um o alimento foi preparado em separado - e as condições de manutenção do alimento após preparo e até o consumo. A observação por uma semana seguida das 3 merendeiras envolvidas, através de coprocultura, não indicaram que as mesmas fossem portadoras assintomáticas desta bactéria ou que tivessem sido envolvidas no surto em questão

Antimicrobial resistance patterns of Salmonella isolated from finishing pigs and environmental samples

The aim of this study was to determine the antimicrobial resistance patterns of Salmonella isolates from pigs and environmental samples collected from modern swine facilities in Brazil. Sixteen samples from a total of 1,026 were positive to Salmonella and six serotypes were identified: Salmonella Typhimurium (1), Salmonella Agona (5), Salmonella Sandiego (4), Salmonella Rissen (1), Salmonella Senftenberg ( 4) and Salmonella Javiana (I). Resistance patterns were different among serotypes, but different isolates from a single serotype had the same antimicrobial pattern. The highest percentage of resistance was to tetracycline (100%), streptomycin (100%), nalidixic acid (100%), cefotaxime (12.5) and tobramycin ( 12.5). All serotypes were I 00% susceptible to ceftriaxone, norfloxacin, ciprofloxacin, ampicillin, gentamycin and chloramphenicol. Intermediate resistance to neomycin (93.5%), amikacin (12.5%) and trimethoprim (12.5%) was seen. The high resistance to tetracycline and streptomycin may be due to its extensive use in pig production