Temporary inhibition of papain by hairpin loop mutants of chicken cystatin Distorted binding of the loops results in cleavage of the Gly9-Ala10 bond

AbstractTemporary inhibition of the cysteine proteinases papain and cathepsin L was observed with several hairpin loop mutants of recombinant chicken cystatin at enzyme concentrations above nanomolar. Kinetic modelling of inhibition data, gel electrophoresis and amino acid sequencing revealed that reappearance of papain activity is due to selective cleavage of the Gly9-Ala10 bond in the N-terminal binding area of the chicken cystatin variants, resulting in truncated inhibitors of lower affinity. Cleavage of the same bond by contaminating papaya proteinase IV was ruled out by previous purification of papain and suitable control experiments. According to the proposed kinetic model, cleavage occurs within the enzyme-inhibitor complex with first order rate constants ktemp of 2.3 × 10−3 up to 5 × 10−1 s−1. A similar ktempKm ratio was found for all mutants (0.7 × 106–2.1 × 106 s−1·M−1); it is almost identical with the kcatKm ratio of the peptide substrate Z-Phe-Arg-NHMec. These results suggest that distorted contacts of one of the hairpin loops affect binding of the N-terminal contact area in a way that covalent interaction of the Gly9-Ala10 bond with the active-site Cys residue of papain can occur and the bond is cleaved in a substrate-like manner

The δ44Ca-temperature calibration on fossil and cultured Globigerinoides sacculifer: New tool for reconstruction of past sea surface temperatures

We report direct δ44Ca-temperature calibration on cultured and fossil calcite foraminifera, showing that Ca isotopes are potentially a new proxy for past sea surface temperatures (SST). Samples have been analyzed using a 43Ca-48Ca double spike and thermal ionization mass spectrometry (TIMS). In order to avoid species-dependent isotope fractionation we focused our investigations on a single foraminifera species (Globigerinoides sacculifer), which is known to inhabit shallow euphotic waters in tropical and subtropical oceans. Ca isotope measurements were performed on cultured G. sacculifer that grew in seawater kept at temperatures of 19.5°, 26.5°, and 29.5°C. A δ44Ca change of 0.24 ± 0.02 per 1°C is defined by the weighted linear regression through reproduced δ44Ca data of the three temperatures (95% confidence level). Application of this new method to fossil G. sacculifer of an Equatorial East Atlantic sediment core (GeoB1112; 5°46.7′S, 10°45.0′W, 3125 m) indicates that the δ44Ca difference between marine isotope stage 1 (MIS-1) and MIS-2 is 0.71 ± 0.24. According to the current δ44Ca-temperature calibration this value corresponds to a temperature difference between MIS-1 and MIS-2 of ∼3.0 ± 1.0°C

Rise to modern levels of ocean oxygenation coincided with the Cambrian radiation of animals.

The early diversification of animals (∼630 Ma), and their development into both motile and macroscopic forms (∼575-565 Ma), has been linked to stepwise increases in the oxygenation of Earth's surface environment. However, establishing such a linkage between oxygen and evolution for the later Cambrian 'explosion' (540-520 Ma) of new, energy-sapping body plans and behaviours has proved more elusive. Here we present new molybdenum isotope data, which demonstrate that the areal extent of oxygenated bottom waters increased in step with the early Cambrian bioradiation of animals and eukaryotic phytoplankton. Modern-like oxygen levels characterized the ocean at ∼521 Ma for the first time in Earth history. This marks the first establishment of a key environmental factor in modern-like ecosystems, where animals benefit from, and also contribute to, the 'homeostasis' of marine redox conditions

δ98/95Mo values and Molybdenum Concentration Data for NIST SRM 610, 612 and 3134: Towards a Common Protocol for Reporting Mo Data

Molybdenum concentration and δ98/95Mo values for NIST SRM 610 and 612 (solid glass), NIST SRM 3134 (lot 891307; liquid) and IAPSO seawater reference material are presented based on comparative measurements by MC-ICP-MS performed in laboratories at the Universities of Bern and Oxford. NIST SRM 3134 and NIST SRM 610 and 612 were found to have identical and homogeneous 98Mo/95Mo ratios at a test portion mass of 0.02 g. We suggest, therefore, that NIST SRM 3134 should be used as reference for the δ–Mo notation and to employ NIST SRM 610 or 612 as solid silicate secondary measurement standards, in the absence of an isotopically homogeneous solid geological reference material for Mo. The δ98/95MoJMC Bern composition (Johnson Matthey ICP standard solution, lot 602332B as reference) of NIST SRM 3134 was 0.25 ± 0.09‰ (2s). Based on five new values, we determined more precisely the mean open ocean δ98/95MoSRM 3134 value of 2.09 ± 0.07‰, which equals the value of δ98/95MoJMC Bern of 2.34 ± 0.07‰. We also refined the Mo concentration data for NIST SRM 610 to 412 ± 9 μg g−1 (2s) and NIST SRM 612 to 6.4 ± 0.7 μg g−1 by isotope dilution. We propose these concentration data as new working values, which allow for more accurate in situ Mo determination using laser ablation ICP-MS or SIMS

Tropical Atlantic SST history inferred from Ca isotope thermometry over the last 140 ka

Exploring the potentials of new methods in palaeothermometry is essential to improve our understanding of past climate change. Here, we present a refinement of the published δ44/40Ca-temperature calibration investigating modern specimens of planktonic foraminifera Globigerinoides sacculifer and apply this to sea surface temperature (SST) reconstructions over the last two glacial–interglacial cycles. Reproduced measurements of modern G. sacculifer collected from surface waters describe a linear relationship for the investigated temperature range (19.0–28.5 °C): δ44/40Ca [‰] = 0.22 (±0.05)∗SST [°C] −4.88. Thus a change of δ44/40Ca[‰] of 0.22 (±0.05) corresponds to a relative change of 1 °C. The refined δ44/40Camodern-calibration allows the determination of both relative temperature changes and absolute temperatures in the past. This δ44/40Camodern-calibration for G. sacculifer has been applied to the tropical East Atlantic sediment core GeoB1112 for which other SST proxy data are available. Comparison of the different data sets gives no indication for significant secondary overprinting of the δ44/40Ca signal. Long-term trends in reconstructed SST correlate strongly with temperature records derived from oxygen isotopes and Mg/Ca ratios supporting the methods validity. The observed change of SST of approximately 3 °C at the Holocene-last glacial maximum transition reveals additional evidence for the important role of the tropical Atlantic in triggering global climate change, based on a new independent palaeothermometer

Geochemical and Sm-Nd Characteristics of a polymetamorphic S-type granitoid: The Mönchalpgneiss - Silvretta nappe/Switzerland

This paper presents trace element and Sm-Nd isotope data on the Mönchalpgneiss in order to compare the geochemistry of the two polymetamorphic igneous suites that comprise over 30% of the Austroalpine Silvretta nappe. The first are the so-called "Younger Orthogneisses" of the "Fliielagranitic Association" and the second are the "Older Orthogneisses" including the Mönchalpgneisswhich are associated with metagabbros, metadiorites, metatonalites and metagranitoids. U-Pb zircon results from the Mönchalpgneiss are indicative of anatectic processes in late Cambrian to Ordovician times. A volcanic-arc (VA) tectonic environment during intrusion explains the direct association of gabbroic and metagranitoid rocks in the Engadine area. This model is in line with the distribution of major, trace and rare earth elements in these anatectic rocks. However, the significance of the geochemical results remains ambiguous, since the average continental crust and paragneisses of the Silvretta also show VA-type signatures in the respective diagrams. Nd model ages on four Mönchalpgneiss whole-rock samples from the type locality are closely grouped around 1.70 Ga, which is a commonly obtained value for European continental crust. This age is interpreted to be the result of a homogeneous mixture of different crustal component

Marine Mo isotope inventory: The role of igneous rock weathering

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