Downstream Migration and Multiple Dam Passage by Atlantic Salmon Smolts

The purpose of this study was to investigate behavior and survival of radio-tagged wild and hatchery-reared landlocked Atlantic Salmon Salmo salar smolts as they migrated past three hydropower dams equipped with fish bypass solutions in the Winooski River, Vermont. Among hatchery-reared smolts, those released early were more likely to initiate migration and did so after less delay than those released late. Once migration was initiated, however, the late-released hatchery smolts migrated at greater speeds. Throughout the river system, hatchery-reared fish performed similarly to wild fish. Dam passage rates varied between the three dams and was highest at the dam where unusually high spill levels occurred throughout the study period. Of the 50 fish that did migrate downstream, only 10% managed to reach the lake. Migration success was low despite the presence of bypass solutions, underscoring the need for evaluations of remedial measures; simply constructing a fishway is not synonymous with providing fish passage.</p

Introduction to “Binary Binds”: Deconstructing Sex and Gender Dichotomies in Archaeological Practice

YesGender archaeology has made significant strides toward deconstructing the hegemony of binary categorizations. Challenging dichotomies such as man/woman, sex/gender, and biology/culture, approaches informed by poststructuralist, feminist, and queer theories have moved beyond essentialist and universalist identity constructs to more nuanced configurations. Despite the theoretical emphasis on context, multiplicity, and fluidity, binary starting points continue to streamline the spectrum of variability that is recognized, often reproducing normative assumptions in the evidence. The contributors to this special issue confront how sex, gender, and sexuality categories condition analytical visibility, aiming to develop approaches that respond to the complexity of theory in archaeological practice. The papers push the ontological and epistemological boundaries of bodies, personhood, and archaeological possibility, challenging a priori assumptions that contain how sex, gender, and sexuality categories are constituted and related to each other. Foregrounding intersectional approaches that engage with ambiguity, variability, and difference, this special issue seeks to “de-contain” categories, assumptions, and practices from “binding” our analytical gaze toward only certain kinds of persons and knowledges, in interpretations of the past and practices in the present

Nothing Lasts Forever: Environmental Discourses on the Collapse of Past Societies

The study of the collapse of past societies raises many questions for the theory and practice of archaeology. Interest in collapse extends as well into the natural sciences and environmental and sustainability policy. Despite a range of approaches to collapse, the predominant paradigm is environmental collapse, which I argue obscures recognition of the dynamic role of social processes that lie at the heart of human communities. These environmental discourses, together with confusion over terminology and the concepts of collapse, have created widespread aporia about collapse and resulted in the creation of mixed messages about complex historical and social processes

Testing advances in molecular discrimination among Chinook salmon life histories: evidence from a blind test

The application of DNA-based markers toward the task of discriminating among alternate salmon runs has evolved in accordance with ongoing genomic developments and increasingly has enabled resolution of which genetic markers associate with important life-history differences. Accurate and efficient identification of the most likely origin for salmon encountered during ocean fisheries, or at salvage from fresh water diversion and monitoring facilities, has far-reaching consequences for improving measures for management, restoration and conservation. Near-real-time provision of high-resolution identity information enables prompt response to changes in encounter rates. We thus continue to develop new tools to provide the greatest statistical power for run identification. As a proof of concept for genetic identification improvements, we conducted simulation and blind tests for 623 known-origin Chinook salmon (Oncorhynchus tshawytscha) to compare and contrast the accuracy of different population sampling baselines and microsatellite loci panels. This test included 35 microsatellite loci (1266 alleles), some known to be associated with specific coding regions of functional significance, such as the circadian rhythm cryptochrome genes, and others not known to be associated with any functional importance. The identification of fall run with unprecedented accuracy was demonstrated. Overall, the top performing panel and baseline (HMSC21) were predicted to have a success rate of 98%, but the blind-test success rate was 84%. Findings for bias or non-bias are discussed to target primary areas for further research and resolution.Keywords: Microsatellites, Oncorhynchus tshawytscha, Individual-identificationKeywords: Microsatellites, Oncorhynchus tshawytscha, Individual-identificatio

Estimates of linkage disequilibrium and effective population size in rainbow trout

<p>Abstract</p> <p>Background</p> <p>The use of molecular genetic technologies for broodstock management and selective breeding of aquaculture species is becoming increasingly more common with the continued development of genome tools and reagents. Several laboratories have produced genetic maps for rainbow trout to aid in the identification of loci affecting phenotypes of interest. These maps have resulted in the identification of many quantitative/qualitative trait loci affecting phenotypic variation in traits associated with albinism, disease resistance, temperature tolerance, sex determination, embryonic development rate, spawning date, condition factor and growth. Unfortunately, the elucidation of the precise allelic variation and/or genes underlying phenotypic diversity has yet to be achieved in this species having low marker densities and lacking a whole genome reference sequence. Experimental designs which integrate segregation analyses with linkage disequilibrium (LD) approaches facilitate the discovery of genes affecting important traits. To date the extent of LD has been characterized for humans and several agriculturally important livestock species but not for rainbow trout.</p> <p>Results</p> <p>We observed that the level of LD between syntenic loci decayed rapidly at distances greater than 2 cM which is similar to observations of LD in other agriculturally important species including cattle, sheep, pigs and chickens. However, in some cases significant LD was also observed up to 50 cM. Our estimate of effective population size based on genome wide estimates of LD for the NCCCWA broodstock population was 145, indicating that this population will respond well to high selection intensity. However, the range of effective population size based on individual chromosomes was 75.51 - 203.35, possibly indicating that suites of genes on each chromosome are disproportionately under selection pressures.</p> <p>Conclusions</p> <p>Our results indicate that large numbers of markers, more than are currently available for this species, will be required to enable the use of genome-wide integrated mapping approaches aimed at identifying genes of interest in rainbow trout.</p

Archaeological Ethnography, Heritage Management, and Community Archaeology: A Pragmatic Approach from Crete

This article examines the introduction of archaeological ethnography as an approach to establish positioned research and bring context-specific and reflexive considerations into community archaeology projects. It considers recent cri-tiques of heritage management in archaeology and the role of archaeologists as experts in it, contending that smaller and less prominent sites exist in different contexts and pose different problems than large-scale projects usually addressed in the literature. We describe how the ‘Three Peak Sanctuaries of Central Crete’ project, investigating prehistoric Minoan ritual sites, involves communities and stakeholders and what demands the latter pose on experts in the field. Archae-ological work is always already implicated in local development projects which create and reproduce power hierarchies. It is therefore important that archaeol-ogists maintain their critical distance from official heritage discourses, as they are materialized in development programmes, while at the same time engaging with local expectations and power struggles; they also have to critically address and position their own assumptions. We use examples from our community archae-ology project to propose that these goals can be reached through archaeological ethnographic fieldwork that should precede any archaeological project to inform its methodological decisions, engage stakeholders, and collaboratively shape heritage management strategies

Transformación en el tiempo: definiendo el sitio de Xuenkal, Yucatán, durante el periodo Clásico Terminal

The ancient Maya center of Xuenkal, located in the Cupul region about 45 km northeast of Chichén Itzá, is one of the few known interior sites that witnessed a substantial Sotuta occupation. Proyecto Arqueológico Xuenkal (PAX) research is investigating the Sotuta material and its relationship to preceding Late-Terminal Classic Cehpech settlement in order to understand the nature of this transition. Drawing upon extensive test excavations and broad excavations of household groups, we suggest that the pre-Sotuta Xuenkal occupation was much more robust than previously hypothesized. Settlement data show extensive Cehpech settlement extending into the hinterlands, while household excavations reveal that Late Classic Xuenkal was both very prosperous and closely tied to neighbouring Ek' Balam and Kulubá, and more distant Cobá. In contrast, the Sotuta settlement is limited to clusters within the site core. Together these data suggest that the Sotuta control of Xuenkal may have been the result of regional political conflict rather than an autochthonous transformation.El antiguo centro maya de Xuenkal, ubicado en la región Cupul, aproximadamente a 45 km hacia el noreste de Chichén Itzá fue uno de los sitios tierra adentro que contaban con una ocupación Sotuta sustancial. La investigación del Proyecto Arqueológico Xuenkal (PAX) se enfoca en el estudio de la cultura material Sotuta y su relación con la ocupación Cehpech del Clásico Tardío-Terminal con el propósito de entender la naturaleza de tal transición. Utilizando una metodología de excavación de pozos de sondeo en contextos domésticos sugerimos que la ocupación pre-Sotuta fue mucho más robusta de lo que originalmente pensábamos. Los resultados del estudio del patrón de asentamiento demuestran que existía un asentamiento Cehpech extensivo que se extendía hacia la periferia, y las excavaciones de las unidades domésticas revelan que durante el Clásico Tardío Xuenkal era un asentamiento mucho más próspero de lo que imaginábamos y que sus pobladores probablemente tenían un contacto estrecho y recíproco con sus vecinos de Ek' Balam, Kulubá y Cobá. En contraste, el asentamiento Sotuta se limita a grupos residenciales localizados dentro del núcleo del sitio. Estos datos en conjunto sugieren que el control que ejerció Sotuta sobre Xuenkal está probablemente ligado al resultado de un conflicto político regional, más que una transformación autóctona

HOUSEHOLD ORGANIZATION AND THE DYNAMICS OF STATE EXPANSION: THE LATE CLASSIC–TERMINAL CLASSIC TRANSFORMATION AT XUENKAL, YUCATAN, MEXICO

While changing views of the sociopolitical history of the northern Maya lowlands now recognize that Chichen Itza's emergence as a major polity on an unprecedented scale occurred during the Terminal Classic period, rather than the Early Postclassic period, the ramifications of significant chronological overlap between Chichen Itza's rise and the demise of neighboring polities have been largely unexplored. The ancient Maya center of Xuenkal, located in the Cupul region about 45 km northeast of Chichen Itza, is one of the few known interior sites to contain substantial (and discrete) Cehpech and Sotuta occupations. The Proyecto Arqueológico Xuenkal (PAX) was initiated in 2004 to elucidate Chichen Itza's role in the history of the Cupul region and what role local Xuenkal elites may have played in negotiating regional political dynamics. As with many surrounding centers, it appears that Xuenkal's occupational history reached its zenith with the Late Classic–Terminal Classic Cehpech ceramic sphere. However, unlike neighboring sites associated with Cehpech, such as Ek' Balam or Yaxuna, Xuenkal also contained a substantial Sotuta settlement concentrated within the site core during the Terminal Classic period. These populations adapted into an evolving regional economy by dramatically increasing household production as compared to Late Classic groups. While Sotuta households were tightly integrated into Chichen Itza's regional economy, evidence for their direct state control is not readily apparent. We suggest that the relationship between Chichen Itza and regional communities was more dynamic than current models contend, and that Chichen Itza's political machinations across the peninsula must be considered in local contexts that varied across households, communities, and regions

The Artisans of Terminal Classic Xuenkal, Yucatan, Mexico Gender and Craft during a Time of Economic Change

Recent attention to the importance of the domestic economy in studies of craft specialization highlights the key role gender plays in the organization of pre-Hispanic economic systems (Hirth 2009; Brumfiel and Nichols 2009). In a comprehensive examination of the domestic economies of ancient Mesoamerica, Kenneth Hirth (2009) argues that household production has been overlooked (in part) because households have been viewed as unchanging and conservative. One could argue that gendered ideals and the values a culture holds about gendered production are also too often considered fixed or unchanging. Useful analogies to modern ethnographic practices can easily become a haphazard argumen