7 research outputs found
Including food systems, biodiversity, nutrition and health in the Post-2020 Global Biodiversity Framework: a submission from the Alliance of Bioversity International and the International Center for Tropical Agriculture.
Tice_etal.2016.SupplementalText.pdf. Supplementary text that includes: an extended materials and methods section, details of light microscope observations, and a discussion on the justification for taxonomic reassignment of Stereomyxa ramosa ATCCÂŽ 50982â˘. (PDF 524 kb
Bioinformatic scripts
Full scripts for bioinformatic pipeline as applied for sequence data analysis for Geisen et al. 2015 Mol. Ecolog
Amoebozoa alignment
Allignment of 18S sequences (NEXUS-file), as used for phylogenetic analysis on Amoebazoa, as presented in Fig.3 of Geisen et al. 2015, Mol Ecology. Allignment includes OTUs recovered in this study, as well as sequences associated with those OTUs (downloaded from NCBI)
file used for statistical analyses
file used for statistical analyse
all morphological and qpcr raw data
all morphological and qpcr raw dat
Additional file 7: Figure S1. of Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group
UnconvergedChainsPB.pdf. 325 gene (102,140 AA sites) phylogeny of Amoebozoa rooted with Obazoa. The tree was built using PhyloBayes-MPI v1.5a under the CAT?+?GTR model of protein evolution. This tree is the summation of all unconverged chains of Phylobayes. Values at nodes are posterior probabilities. (PDF 206 kb
Dataset of "Unearthing the soil-borne microbiome of land plants"
We described the soil-borne microbiome of land plants</p