Comparison of molecular typing methods for Candida albicans.

This is the published version. Copyright 1992 American Society for Microbiology.Four molecular approaches to determining the types of Candida albicans strains were compared. The strains used were those whose repeated DNA (ribosomal and mitochondrial) EcoRI restriction fragment length polymorphisms (RFLP) were determined by Stevens et al. (D. A. Stevens, F. C. Odds, and S. Scherer, Rev. Infect. Dis. 12:258-266, 1990). Scherer and Stevens (S. Scherer and D. A. Stevens, Proc. Natl. Acad. Sci. USA 85:1452-1456, 1988) used the same strains to examine the Southern blots of genomic EcoRI digests probed with the repeated sequence 27A. The results of these investigators were compared with determinations of RFLPs generated from repeated DNA by the enzyme HinfI and examination of the karyotypes of strains under two sets of conditions, one for the smaller chromosomes and one for the larger ones. Analysis of RFLPs of repeated DNA is most convenient but shows the lowest degree of resolution. Use of the repeated sequence and use of karyotype have very high resolution, but the former method is more convenient than the latter. HinfI digestion is more sensitive than EcoRI digestion but equally convenient. By using all four methods, separate types were identified for 18 of the 20 strains examined

Canine presumed glial brain tumours treated with radiotherapy: Is there an inferior outcome in tumours contacting the subventricular zone?

Post-treatment outcome in canine glial tumours is described with a broad range of survival times between 2 and 28 months. After surgery or radiation therapy, the tumours may progress locally or spread within the central nervous system. It is unknown if tumour- or patient-specific factors influence prognosis. In humans, glioblastoma involving the subventricular zone has been found to recur distantly, with shortened time to progression and overall survival. We included 32 dogs irradiated for a presumptive primary glial brain tumour in this retrospective cohort study. Tumours were grouped relative to subventricular zone contact and overt ventricular invasion assessing pre-treatment magnetic resonance images. Median time to progression (TTP) for all cases was 534 days (95%CI, 310–758), with a significantly shorter TTP in dogs with lesions at the subventricular zone (median TTP, 260 vs. 687 days; p =.049). Tumours at the subventricular zone progressed more often (p =.001), and more likely as CNS-metastasis (52.9% vs. 13.3%, p =.028). Median overall survival (OS) was 489 days (95%CI, 147–831) and median tumour-specific survival 609 days (95%CI, 382–835). Involvement of the subventricular zone was significantly associated with a shorter tumour-specific survival (median, 306 vs. 719 days; p =.044). Glial tumours contacting the subventricular zone in dogs have a shorter tumour-specific survival and a higher rate of progression and CNS-metastasis. Despite local tumour control, metastasis must be considered and should prompt further treatment approaches

Counteracting Green Alder Shrub Expansion by Low-Input Grazing

In the past decades, the decline of traditional agriculture has caused an abandonment of marginal pastures in many mountain areas of Europe. In the Swiss Alps, green alder (Alnus viridis) is the most abundant successional shrub. A survey of 24 pasture-shrub gradients showed that the encroachment by green alder, in contrast to other shrubs, is associated with a substantial decline in plant species richness. The understorey of alder is primarily populated by very few, broad-leaved herbaceous species benefitting from the atmospheric nitrogen fixed by actinomycetes in symbiosis with green alder. However, the understory vegetation also provides an underestimated forage, rich in protein and comparable in productivity and digestibility to nearby open pastures. A two-year grazing experiment with cattle (Dexter), sheep (local Engadine sheep) and mixed-breed goats in the Eastern Swiss Alps demonstrated that robust breeds were able to exploit these resources as they readily penetrated the thickets. The Engadine sheep and the goats consumed green alder bark and thus actively counteracted shrub encroachment. Dexter cattle did not forage on alder bark but on leaves and opened the thickets by their movement through them. Since goats preferred other woody species to green alder and depleted them before the alder, they may impair the regeneration of late-successional forest. Dexter heifers and Engadine lambs performed equally well on pastures with high shrub cover and on open pastures in terms of average daily weight gain, carcass and meat quality. This was facilitated by the comparatively low productivity of these breeds. In this way, low-input grazing systems utilizing adapted breeds, especially sheep, can add to conservation goals and sustain a viable meat production in marginal areas

Defensive responses of cuttlefish to different teleost predators

Author Posting. © Marine Biological Laboratory, 2013. This article is posted here by permission of Marine Biological Laboratory for personal use, not for redistribution. The definitive version was published in Biological Bulletin 225 (2013): 161-174.We evaluated cuttlefish (Sepia officinalis) responses to three teleost predators: bluefish (Pomatomus saltatrix), summer flounder (Paralichthys dentatus), and black seabass (Centropristis striata). We hypothesized that the distinct body shapes, swimming behaviors, and predation tactics exhibited by the three fishes would elicit markedly different antipredator responses by cuttlefish. Over the course of 25 predator-prey behavioral trials, 3 primary and 15 secondary defense behaviors of cuttlefish were shown to predators. In contrast, secondary defenses were not shown during control trials in which predators were absent. With seabass—a benthic, sit-and-pursue predator—cuttlefish used flight and spent more time swimming in the water column than with other predators. With bluefish—an active, pelagic searching predator—cuttlefish remained closely associated with the substrate and relied more on cryptic behaviors. Startle (deimatic) displays were the most frequent secondary defense shown to seabass and bluefish, particularly the Dark eye ring and Deimatic spot displays. We were unable to evaluate secondary defenses by cuttlefish to flounder—a lie-and-wait predator—because flounder did not pursue cuttlefish or make attacks. Nonetheless, cuttlefish used primary defense during flounder trials, alternating between cryptic still and moving behaviors. Overall, our results suggest that cuttlefish may vary their behavior in the presence of different teleost predators: cryptic behaviors may be more important in the presence of active searching predators (e.g., bluefish), while conspicuous movements such as swimming in the water column and startle displays may be more prevalent with relatively sedentary, bottom-associated predators (e.g., seabass).This project was funded by a United States Department of Defense, Defense Advanced Research Projects Agency, Defense Sciences Office (DARPA DSO) Grant (HR0011-09- 1-0017)

Primary and secondary defences of squid to cruising and ambush fish predators : variable tactics and their survival value

Author Posting. © The Author(s), 2010. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Animal Behaviour 81 (2011): 585-594, doi:10.1016/j.anbehav.2010.12.002.Longfin squid (Loligo pealeii) were exposed to two predators, bluefish (Pomatomus saltatrix) and summer flounder (Paralichthys dentatus), representing cruising and ambush foraging tactics, respectively. During 35 trials, 86 predator–prey interactions were evaluated between bluefish and squid, and in 29 trials, 92 interactions were assessed between flounder and squid. With bluefish, squid predominantly used stay tactics (68.6%, 59/86) as initial responses. The most common stay response was to drop to the bottom, while showing a disruptive body pattern, and remain motionless. In 37.0% (34/92) of interactions with flounder, squid did not detect predators camouflaging on the bottom and showed no reaction prior to being attacked. Squid that did react, used flee tactics more often as initial responses (43.5%, 40/92), including flight with or without inking. When all defence behaviours were considered concurrently, flight was identified as the strongest predictor of squid survival during interactions with each predator. Squid that used flight at any time during an attack sequence had high probabilities of survival with bluefish (65%, 20/31) and flounder (51%, 18/35). The most important deimatic/protean behaviour used by squid was inking. Inking caused bluefish to startle (deimatic) and abandon attacks (probability of survival = 61%, 11/18) and caused flounder to misdirect (protean) attacks towards ink plumes rather than towards squid (probability of survival = 56%, 14/25). These are the first published laboratory experiments to evaluate the survival value of antipredator behaviours in a cephalopod. Results demonstrate that squid vary their defence tactics in response to different predators and that the effectiveness of antipredator behaviours is contingent upon the behavioural characteristics of the predator encountered.This study was funded by the Woods Hole Oceanographic Institution Sea Grant Program, the Massachusetts Marine Fisheries Institute, the University of Massachusetts and the Five College Coastal and Marine Sciences Program. R. T. Hanlon acknowledges partial support from ONR grant N000140610202 and the Sholley Foundation

Income inequality and its relationship with loneliness prevalence: A cross-sectional study among older adults in the US and 16 European countries

BACKGROUNDS: The prevalence of loneliness increases among older adults, varies across countries, and is related to within-country socioeconomic, psychosocial, and health factors. The 2000-2019 pooled prevalence of loneliness among adults 60 years and older went from 5.2% in Northern Europe to 24% in Eastern Europe, while in the US was 56% in 2012. The relationship between country-level factors and loneliness, however, has been underexplored. Because income inequality shapes material conditions and relative social deprivation and has been related to loneliness in 11 European countries, we expected a relationship between income inequality and loneliness in the US and 16 European countries. METHODS: We used secondary cross-sectional data for 75,891 adults age 50+ from HRS (US 2014), ELSA (England, 2014), and SHARE (15 European countries, 2013). Loneliness was measured using the R-UCLA three-item scale. We employed hierarchical logistic regressions to analyse whether income inequality (GINI coefficient) was associated with loneliness prevalence. RESULTS: The prevalence of loneliness was 25.32% in the US (HRS), 17.55% in England (ELSA) and ranged from 5.12% to 20.15% in European countries (SHARE). Older adults living in countries with higher income inequality were more likely to report loneliness, even after adjusting for the sociodemographic composition of the countries and their Gross Domestic Products per capita (OR: 1.52; 95% CI: 1.17-1.97). DISCUSSION: Greater country-level income inequality was associated with higher prevalence of loneliness over and above individual-level sociodemographics. The present study is the first attempt to explore income inequality as a predictor of loneliness prevalence among older adults in the US and 16 European countries. Addressing income distribution and the underlying experience of relative deprivation might be an opportunity to improve older adults' life expectancy and wellbeing by reducing loneliness prevalence