A Study on Intrusion Detection System in Wireless Sensor Networks

The technology of Wireless Sensor Networks (WSNs) has become most significant in present day. WSNs are extensively used in applications like military, industry, health, smart homes and smart cities. All the applications of WSN require secure communication between the sensor nodes and the base station. Adversary compromises at the sensor nodes to introduce different attacks into WSN. Hence, suitable Intrusion Detection System (IDS) is essential in WSN to defend against the security attack. IDS approaches for WSN are classified based on the mechanism used to detect the attacks. In this paper, we present the taxonomy of security attacks, different IDS mechanisms for detecting attacks and performance metrics used to assess the IDS algorithm for WSNs. Future research directions on IDS in WSN are also discussed

SYNTHESIS AND BIOLOGICAL EVALUATION OF 2-(2'/3'/4'/6'-SUBSTITUTED PHENYL)-1H-INDOLES

Objective: Indole derivatives were reported to a wide range of biological activities. Thus it was our aim to synthesize a series of 2-(2'/3'/4'/6'-substituted phenyl) -1H-indoles using clayzic catalyst and screen for their in vitro anti-inflammatory, antioxidant and antimicrobial activities.Methods: Various substituted acetophenones were reacted with phenylhydrazine in the presence of modified clayzic catalyst and obtained 2-(2'/3'/4'/6'-substituted phenyl)-1H-indoles in a one pot reaction. The cyclized compounds were characterized by FT-IR, NMR, UV-Vis and mass spectral analyses and screened for anti-inflammatory activity against cytokines tumor necrosis factor (TNF-α) and interleukin-6 (IL-6) by measuring cytokine production by performing sandwich ELISA model, antioxidant activity by DPPH assay method and antimicrobial activity by well-diffusion method.Results: An eco-friendly route with better yields for the synthesis of 2-(2'/3'/4'/6'-substituted phenyl)-1H-indoles in the presence of clayzic catalyst was achieved. The biological activity results suggested that compounds (2d, 2e and 2i) have excellent anti-inflammatory activity, compounds (2a-2d and 2j) possessing better antioxidant property and compounds (2b, 2i, 2k and 2m) have promising antibacterial and antifungal activities when compared to the standard drugs.Conclusion: Synthesis of 2-(2'/3'/4'/6'-substituted phenyl)-1H-indoles was successfully achieved in the presence of clayzic catalyst. Compounds bearing amino, methyl, methoxy, hydroxyl and fluoro groups have shown better anti-inflammatory, antioxidant and antimicrobial activities when compared to the other compounds and 1H-indole.Â

ACTIVITY OF POLYHERBAL EXTRACT AGAINST BACTERIA CAUSING SKIN INFECTIONS IN DIABETIC PATIENTS.

Objective   : - The objective of   this   study is to evaluate antibacterial activity of Polyherbal extract on few    microorganisms causing skin infections in most of the  diabetic patients  .Methods   : - Methanolic Polyherbal extract was prepared  from Acacia ferruginia (bark & fruit), Chloroxylon swietenia (bark, leaf, root), Casearia elliptica (bark), Terminalia alata (root, leaf). The preliminary phytochemical analysis was performed to identify the major phytoconstituents  in the extract.  Polyherbal extract was evaluated for antibacterial activity against bacteria   like Staphylococcus aureus, Bacillus subtilis, Pseudomonas aeruginosa,   Escherichia coli, Proteus species, Klebsiella species causing skin infections , diabetic foot infections in diabetic patients. In-vitro method of agar diffusion disc method was used for the evaluation of antibacterial activity through zone of inhibition.  The standard drug used was Gentamicin. Minimum Inhibitory Concentration (MIC) of the extract was done  using broth dilution method.Results:  The polyherbal extract showed good antibacterial activity. The standard drug used was Gentamicin.  The Methanolic   Polyherbal extract showed   potent activityon all the selected microorganisms. The Polyherbal extract was active  against Pseudomonas aeruginosa (2.57 +  0.39) and E.coli (2.92 + 0.29) when compared with standard. The polyherbal extract showed potent activity  on Bacillus subtilis and  Proteus vulgaris.Conclusion : The polyherbal extract showed broad spectrum activity by being active against gram positive and gram negative microorganisms providing the scope for further analysis as a antibacterial preparation for the skin infections in diabetes patients. Â

Pattern and distribution of lung parenchymal changes in COVID-19 infection on high resolution computed tomography: a descriptive cross-sectional study

Background: This was a descriptive cross-sectional study conducted in a tertiary care hospital in south India during the peak of the COVID-19 infection pandemic in India between June 2020 to June 2021. HRCT lung parenchymal findings of patients with COVID-19 infection were studied, and the pattern and distribution of various lung parenchymal changes in each lung were described. HRCT lung findings were further correlated with clinical findings and clinical severity, which further helped in the clinical management of patients.Methods: This descriptive cross-sectional study was done at Sagar Hospitals, Tilak Nagar, Jayanagar, Bengaluru on a total of 111 RT-PCR positive COVID-19 patients in the age group 18 to 80. HRCT lung imaging findings were studied from June 2020 to June 2021 during the pandemic. These findings were further correlated with clinical findings and the clinical severity of the patient.Results: This study showed that chest CT findings in COVID-19 infection are variable. Ground glass opacity was the most common lesion observed, followed by Air space opacification and consolidation with an air bronchogram. In some cases, a crazy-paving pattern, subpleural linear bands, subpleural reticulations and fibrotic streaks were observed. A few cases showed traction bronchiectasis due to adjacent lung fibrosis and lung cyst within lesions. The lesion distribution was both bilateral (more common) and unilateral and showed peripheral predominance. There was a positive correlation between the CT severity score and clinical grading and the clinical severity of the patient.Conclusions: HRCT lung findings in COVID-19 patients were described in detail, including predominant lesion, predominant pattern, distribution in detail with reference to each lung segment, laterality, and correlation with clinical severity

In search of the right literature search engine(s)

*Background*
Collecting scientific publications related to a specific topic is crucial for different phases of research, health care and ‘effective text mining’. Available bio-literature search engines vary in their ability to scan different sections of articles, for the user-provided search terms and/or phrases. Since a thorough scientific analysis of all major bibliographic tools has not been done, their selection has often remained subjective. We have considered most of the existing bio-literature search engines (http://www.shodhaka.com/startbioinfo/LitSearch.html) and performed an extensive analysis of 18 literature search engines, over a period of about 3 years. Eight different topics were taken and about 50 searches were performed using the selected search engines. The relevance of retrieved citations was carefully assessed after every search, to estimate the citation retrieval efficiency. Different other features of the search tools were also compared using a semi-quantitative method.
*Results*
The study provides the first tangible comparative account of relative retrieval efficiency, input and output features, resource coverage and a few other utilities of the bio-literature search tools. The results show that using a single search tool can lead to loss of up to 75% relevant citations in some cases. Hence, use of multiple search tools is recommended. But, it would also not be practical to use all or too many search engines. The detailed observations made in the study can assist researchers and health professionals in making a more objective selection among the search engines. A corollary study revealed relative advantages and disadvantages of the full-text scanning tools.
*Conclusion*
While many studies have attempted to compare literature search engines, important questions remained unanswered till date. Following are some of those questions, along with answers provided by the current study:
a)	Which tools should be used to get the maximum number of relevant citations with a reasonable effort? ANSWER: _Using PubMed, Scopus, Google Scholar and HighWire Press individually, and then compiling the hits into a union list is the best option. Citation-Compiler (http://www.shodhaka.com/compiler) can help to compile the results from each of the recommended tool._
b)	What is the approximate percentage of relevant citations expected to be lost if only one search engine is used? ANSWER: _About 39% of the total relevant citations were lost in searches across 4 topics; 49% hits were lost while using PubMed or HighWire Press, while 37% and 20% loss was noticed while using Google Scholar and Scopus, respectively._ 
c)	Which full text search engines can be recommended in general? ANSWER: _HighWire Press and Google Scholar._
d)	Among the mostly used search engines, which one can be recommended for best precision? ANSWER: _EBIMed._
e)	Among the mostly used search engines, which one can be recommended for best recall? ANSWER: _Depending on the type of query used, best recall could be obtained by HighWire Press or Scopus.

UV SPECTROPHOTOMETRIC METHOD DEVELOPMENT AND VALIDATION FOR SIMULTANEOUS ESTIMATION OF ALPRAZOLAM AND MEBEVERINE HYDROCHLORIDE IN BULK DRUG AND PHARMACEUTICAL FORMULATION

A simple, accurate, precise, sensitive, rapid and economical spectrophotometric method was developed and validated for simultaneous estimation of Alprazolam (ALP) and Mebeverine HCl (MBH) in bulk drug and pharmaceutical formulation. The estimation of these drugs was carried out by using 0.1M HCl as a solvent. The wavelength maxima for Alprazolam and Mebeverine HCl were found to be 262.3 nm and 222.5 nm. The linearity range was observed in the concentration range of 3-15 µg/ml for both drugs and regression equation was found to be for ALP 0.0565x+0.0138 and for MBH 0.049x-0.0126. Percentage recoveries for Alprazolam and Mebeverine HCl were found to be 99.84% and 99.47% respectively. % RSD values for Intra-day precision were found to be for ALP 1.18% and for MBH 0.59%. Inter-day precision %RSD values were found to be for ALP 0.94% and for MBH 0.69%. LOD was found to be for ALP 1.42 (µg/ml) and for MBH 2.1542 (µg/ml). LOQ was found to be for ALP 4.3242 (µg/ml) and for MBH 6.5442 (µg/ml). The %Assay of Alprazolam and Mebeverine HCl were found to be 99.20% and 100.02% respectively. Statistical analysis proved that the developed method can be successfully used for simultaneous analysis of Alprazolam and Mebeverne HCl in pure and tablet dosage forms

Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level

Funding Information: TC was supported by a grant of the NWO ALWOP.233 to RPdV. RSK and SG were supported by a grant of the Applied Science division (TTW) of NWO and the Technology Program of the Ministry of Infrastructure and Water Management 15807 to RPdV. The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, was supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The Academy of Finland grant no. 308284 to MRM is also acknowledged. Publisher Copyright: © 2022 The Author(s)The current impetus towards a sustainable bio-based economy has accelerated research to better understand the mechanisms through which filamentous fungi convert plant biomass, a valuable feedstock for biotechnological applications. Several transcription factors have been reported to control the polysaccharide degradation and metabolism of the resulting sugars in fungi. However, little is known about their individual contributions, interactions and crosstalk. D-galactose is a hexose sugar present mainly in hemicellulose and pectin in plant biomass. Here, we study D-galactose conversion by Aspergillus niger and describe the involvement of the arabinanolytic and xylanolytic activators AraR and XlnR, in addition to the D-galactose-responsive regulator GalX. Our results deepen the understanding of the complexity of the filamentous fungal regulatory network for plant biomass degradation and sugar catabolism, and facilitate the generation of more efficient plant biomass-degrading strains for biotechnological applications.Peer reviewe

The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum

Fungi play a critical role in the global carbon cycle by degrading plant polysaccharides to small sugars and metabolizing them as carbon and energy sources. We mapped the well-established sugar metabolic network of Aspergillus niger to five taxonomically distant species (Aspergillus nidulans, Penicillium subrubescens, Trichoderma reesei, Phanerochaete chrysosporium and Dichomitus squalens) using an orthology-based approach. The diversity of sugar metabolism correlates well with the taxonomic distance of the fungi. The pathways are highly conserved between the three studied Eurotiomycetes (A. niger, A. nidulans, P. subrubescens). A higher level of diversity was observed between the T. reesei and A. niger, and even more so for the two Basidiomycetes. These results were confirmed by integrative analysis of transcriptome, proteome and metabolome, as well as growth profiles of the fungi growing on the corresponding sugars. In conclusion, the establishment of sugar pathway models in different fungi revealed the diversity of fungal sugar conversion and provided a valuable resource for the community, which would facilitate rational metabolic engineering of these fungi as microbial cell factories

Activation of Epithelial-Mesenchymal Transition and Altered β-Catenin Signaling in a Novel Indian Colorectal Carcinoma Cell Line

Colorectal cancer is the third major cause of cancer-related mortality worldwide. The upward trend in incidence and mortality rates, poor sensitivity to conventional therapies and a dearth of early diagnostic parameters pose a huge challenge in the management of colorectal cancer in India. Due to the high level of genetic diversity present in the Indian population, unraveling the genetic contributions toward pathogenesis is key for understanding the etiology of colorectal cancer and in reversing this trend. We have established a novel cell line, MBC02, from an Indian colorectal cancer patient and have carried out extensive molecular characterization to unravel the pathological alterations in this cell line. In-depth molecular analysis of MBC02 revealed suppression of E-cadherin expression, concomitant with overexpression of EMT related molecules, which manifested in the form of highly migratory and invasive cells. Loss of membrane-tethered E-cadherin released β-catenin from the adherens junction resulting in its cytoplasmic and nuclear accumulation and consequently, upregulation of c-Myc. MBC02 also showed dramatic transcriptional upregulation of β-catenin. Remarkably, we observed significantly elevated proteasome activity that perhaps co-evolved to compensate for the unnaturally high mRNA level of β-catenin to regulate the increased protein load. In addition, there was substantial misregulation of other clinically relevant signaling pathways that have clinical relevance in the pathogenesis of colorectal cancer. Our findings pave the way toward understanding the molecular differences that could define pathogenesis in cancers originating in the Indian population

Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level

The current impetus towards a sustainable bio-based economy has accelerated research to better understand the mechanisms through which filamentous fungi convert plant biomass, a valuable feedstock for biotechnological applications. Several transcription factors have been reported to control the polysaccharide degradation and metabolism of the resulting sugars in fungi. However, little is known about their individual contributions, interactions and crosstalk. D-galactose is a hexose sugar present mainly in hemicellulose and pectin in plant biomass. Here, we study D-galactose conversion by Aspergillus niger and describe the involvement of the arabinanolytic and xylanolytic activators AraR and XlnR, in addition to the D-galactose-responsive regulator GalX. Our results deepen the understanding of the complexity of the filamentous fungal regulatory network for plant biomass degradation and sugar catabolism, and facilitate the generation of more efficient plant biomass-degrading strains for biotechnological applications