Iron ooid beds of the Carolinefjellet Formation, Spitsbergen, Norway

Iron ooid beds are unusual deposits that have been linked to greenhouse conditions and the transgressive flooding of shallow shelves, and which were globally prevalent during certain periods. Within the marine, Aptian-Albian, Carolinefjellet Formation of Spitsbergen, chamosite ooids have been found within distinctive sandstone beds at six localities, and at a consistent stratigraphic position within the basal Dalkjegla Member. Distinctive characteristics include the iron ooids themselves, a coarser grain size, intercalation with silty siderites, grading, cross-beds indicating offshore or longshore transport, and a lack of burrowing. The enclosing sands display planar and hummocky crossstratification and abundant oscillation ripple marks, and are interpreted as lagoon-attached bar complexes. The stratigraphic position and traits of the iron ooid sands are consistent with seaward storm transport and preservation within interbar swales. Ooids vary in shape considerably, and display evidence for multiple growth events. Nuclei of quartz, opaques, carbonate clasts and laminated crusts are typically encircled by finer grained tangential chamosite and opaque laminae, sometimes with outer overgrowths of calcite and/or radial chamosite. The Dalkjegla Member is the marine portion of a large-scale transgressive tract, attached to underlying fluvio-estuarine Helvetiafjellet Formation strata. A lagoonal environment associated with the basal shales of the Dalkjegla Member represents a logical setting, where riverine iron concentration and iron silicate growth could occur. The Spitsbergen iron ooid beds extend the known occurrence of Cretaceous examples, representing a less common High-Latitude example, and one not directly associated with a transgressive flooding surface

The bacterial transposon Tn7 causes premature polyadenylation of mRNA in eukaryotic organisms: TAGKO mutagenesis in filamentous fungi

TAGKO is a Tn7-based transposition system for genome wide mutagenesis in filamentous fungi. The effects of transposon insertion on the expression of TAGKO alleles were examined in Magnaporthe grisea and Mycosphaerella graminicola. Northern analysis showed that stable, truncated transcripts were expressed in the TAGKO mutants. Mapping of the 3′-ends of TAGKO cDNAs revealed that they all contain Tn7 end sequences, regardless of the transposon orientation. Polyadenylation signals characteristic of eukaryotic genes, preceded by stop codons in all frames, are located in both ends of the bacterial transposon. Thus, TAGKO transcripts are prematurely polyadenylated, and truncated proteins are predicted to be translated in the fungal mutants. Depending on the extent of protein truncation, TAGKO mutations in HPD4 (encoding p-hydroxyphenylpyruvate dioxygenase) resulted in tyrosine sensitivity in the two fungi. Similarly, a particular M.grisea CBS1 (encoding cystathionine β-synthase) TAGKO cDNA failed to complement cysteine auxotrophy in a yeast CBS mutant. TAGKO, therefore, represents a useful tool for in vivo study of truncated gene products in filamentous fungi.postprin

Petrography of Lower Cretaceous sandstones on Spitsbergen

The sandstone petrography of sample suites from four sites spanning the Rurikfjellet (Hauterivian) to Carolinefjellet (Aptian–Albian) formations in central Spitsbergen was investigated. The sandstones show a distinct stepwise shift in composition from quartz arenites to sublitharenites and lithic arenites, typically within the upper part of the Helvetiafjellet Formation. This shift is related to the introduction of 10 - 25 % (grain %) plagioclase grains and volcanic lithics, and a notable increase in basement and sedimentary lithics. Quartz grain character also changes, and grain shapes become more varied. The shift is also associated with the transgressive arrival of marine sediments in the area, and the introduction of sands from the east-northeast by shore-parallel transport. Regional regression and subsequent transgression, and the change in sandstone composition is attributed to the development of the High Arctic Large Igneous Province in the region. The relative constancy of sand composition and volume of volcanic detritus within the Carolinefjellet Formation suggests long term (≈ 20 M) stability of the sediment system and a large volcanic source area, consistent with LIP (Large Igneous Province) derivation, along with significant exposure of basement rocks. Sample spacing and sediment recycling and mixing do not allow detection of events that would have changed sandstone composition that were less than ≈ 1 M duration. Preservation of significant amounts of plagioclase in a sediment-starved shelf can be explained by relatively cold climatic conditions

A commentary on claw deformities in the blue crab

Throughout history mankind has probably reacted to all natural phenomena by some degree of either attraction or repulsion. Certainly the same objects or phenomena are not viewed exactly alike by all. The rhythmic, as contrasted with discordant, motion, or symmetrical versus non-symmetrical patterns of structure may elicit various feelings in different people. Since natural growth generally produces structural patterns which follow some type of symmetry, this is what we usually expect. While sluggish motion and radial symmetry often are associated, usually animals which dart about or are quick in action have evolved along lines of bilateral symmetry, as have fishes and crabs. Any deviation from recognized actions and structural patterns is certain to attract one\u27s attention . In contrast to a fish and other bilaterally symmetrical animals, including most crustaceans, the crab darts sideways, not along its axis of symmetry. In this study we have been attracted to deviations from symmetry in the external structure of crab claws

Scale-free memory model for multiagent reinforcement learning. Mean field approximation and rock-paper-scissors dynamics

A continuous time model for multiagent systems governed by reinforcement learning with scale-free memory is developed. The agents are assumed to act independently of one another in optimizing their choice of possible actions via trial-and-error search. To gain awareness about the action value the agents accumulate in their memory the rewards obtained from taking a specific action at each moment of time. The contribution of the rewards in the past to the agent current perception of action value is described by an integral operator with a power-law kernel. Finally a fractional differential equation governing the system dynamics is obtained. The agents are considered to interact with one another implicitly via the reward of one agent depending on the choice of the other agents. The pairwise interaction model is adopted to describe this effect. As a specific example of systems with non-transitive interactions, a two agent and three agent systems of the rock-paper-scissors type are analyzed in detail, including the stability analysis and numerical simulation. Scale-free memory is demonstrated to cause complex dynamics of the systems at hand. In particular, it is shown that there can be simultaneously two modes of the system instability undergoing subcritical and supercritical bifurcation, with the latter one exhibiting anomalous oscillations with the amplitude and period growing with time. Besides, the instability onset via this supercritical mode may be regarded as "altruism self-organization". For the three agent system the instability dynamics is found to be rather irregular and can be composed of alternate fragments of oscillations different in their properties.Comment: 17 pages, 7 figur

Simpson's paradox visualized: The example of the Rosiglitazone meta-analysis

<p>Abstract</p> <p>Background</p> <p>Simpson's paradox is sometimes referred to in the areas of epidemiology and clinical research. It can also be found in meta-analysis of randomized clinical trials. However, though readers are able to recalculate examples from hypothetical as well as real data, they may have problems to easily figure where it emerges from.</p> <p>Method</p> <p>First, two kinds of plots are proposed to illustrate the phenomenon graphically, a scatter plot and a line graph. Subsequently, these can be overlaid, resulting in a overlay plot. The plots are applied to the recent large meta-analysis of adverse effects of rosiglitazone on myocardial infarction and to an example from the literature. A large set of meta-analyses is screened for further examples.</p> <p>Results</p> <p>As noted earlier by others, occurrence of Simpson's paradox in the meta-analytic setting, if present, is associated with imbalance of treatment arm size. This is well illustrated by the proposed plots. The rosiglitazone meta-analysis shows an effect reversion if all trials are pooled. In a sample of 157 meta-analyses, nine showed an effect reversion after pooling, though non-significant in all cases.</p> <p>Conclusion</p> <p>The plots give insight on how the imbalance of trial arm size works as a confounder, thus producing Simpson's paradox. Readers can see why meta-analytic methods must be used and what is wrong with simple pooling.</p

MMS Measurements of the Vlasov Equation: Probing the Electron Pressure Divergence Within Thin Current Sheets

We investigate the kinetic structure of electron‐scale current sheets found in the vicinity of the magnetopause and embedded in the magnetosheath within the reconnection exhaust. A new technique for computing terms of the Vlasov equation using Magnetospheric Multiscale (MMS) measurements is presented and applied to study phase space density gradients and the kinetic origins of the electron pressure divergence found within these current sheets. Crescent‐shaped structures in ∇⊥2fe give rise to bipolar and quadrupolar signatures in v·∇fe measured near the maximum ∇·Pe inside the current layers. The current density perpendicular to the magnetic field is strong (J⊥∼2 μA/m2), and the thickness of the current layers ranges from 3 to 5 electron inertial lengths. The electron flows supporting the current layers mainly result from the combination of E×B and diamagnetic drifts. We find nonzero J·E′ within the current sheets even though they are observed apart from typical diffusion region signatures.publishedVersio

Baryonic Popcorn

In the large N limit cold dense nuclear matter must be in a lattice phase. This applies also to holographic models of hadron physics. In a class of such models, like the generalized Sakai-Sugimoto model, baryons take the form of instantons of the effective flavor gauge theory that resides on probe flavor branes. In this paper we study the phase structure of baryonic crystals by analyzing discrete periodic configurations of such instantons. We find that instanton configurations exhibit a series of "popcorn" transitions upon increasing the density. Through these transitions normal (3D) lattices expand into the transverse dimension, eventually becoming a higher dimensional (4D) multi-layer lattice at large densities. We consider 3D lattices of zero size instantons as well as 1D periodic chains of finite size instantons, which serve as toy models of the full holographic systems. In particular, for the finite-size case we determine solutions of the corresponding ADHM equations for both a straight chain and for a 2D zigzag configuration where instantons pop up into the holographic dimension. At low density the system takes the form of an "abelian anti-ferromagnetic" straight periodic chain. Above a critical density there is a second order phase transition into a zigzag structure. An even higher density yields a rich phase space characterized by the formation of multi-layer zigzag structures. The finite size of the lattices in the transverse dimension is a signal of an emerging Fermi sea of quarks. We thus propose that the popcorn transitions indicate the onset of the "quarkyonic" phase of the cold dense nuclear matter.Comment: v3, 80 pages, 18 figures, footnotes 5 and 7 added, version to appear in the JHE