Role of Bacterial-Fungal Interactions on Heavy Metal Phytotoxicity in Serpentine Soil

This study was conducted to understand the role of bacterial–fungal interactions on heavy metal uptake by Zea mays plants. A pot experiment was conducted for 90 days with Z. mays in serpentine soil inoculated with a Gram-negative bacterium, fungus (Aspergilllus sp.) and both microbes to determine the effects of inoculation on nickel, manganese, chromium and cobalt concentrations in plant tissue and soil. Soil nutrients and soil enzyme activities were measured to determine the effect of inoculations on soil quality. Inoculation of microorganisms increased shoot and root biomass, and the maximum biomass was in the bacterial–fungal inoculation. This could be due to the solubilisation of phosphate and production of indole acetic acid. Although the combination treatment contributed to an increase in heavy metal uptake in Z. mays plants, the lowest translocation was observed in the combination treatment. Moreover, the soil available nitrogen, available phosphorous and total organic carbon content were increased with the microbial inoculation. Similarly, the soil dehydrogenase activity was higher as a result of microbial inoculation, whereas the highest dehydrogenase activity was reported in the combination inoculation. This study confirms the synergistic effect of bacterial–fungal inoculation as a soil-quality enhancer and as a plant-growth promoter in the presence of heavy metals

Comparison of T2-weighted Magnetic Resonance Imaging findings with histological findings in degenerated lumbar discs in patients with lumbar disc herniation

Diagnosis of disc degeneration and herniation largely depends on Magnetic Resonance Imaging (MRI) and X-rays which fails to detect early disc degeneration. This study was conducted to compare the degenerative changes seen in histological assessment with T2-weighted MRI findings. The study recruited 104 patients with lumbar disc herniation undergoing lumbar discectomy. Excised lumbar disc fragments were taken for histology and T2-weighted MRI was conducted prior to the surgery. Excised disc fragments were subjected to routine histology procedure and van Gieson stain for collagen was performed on each specimen.  Disc degeneration was assessed by histological parameters and T2-weighted MRI findings. The majority of subjects (94.2%) showed degenerative changes of the excised portion of the lumbar discs in histological assessment of the disc. However, T2-weighted MRI findings of degenerative changes of the discs were comparatively less (35.6%). According to the histological assessment, higher percentage (61.5 %) of discs were moderately degenerated while 7.7 % had severely degenerated discs. All patients who were confirmed for disc degeneration with T2-weighted MRI (n=37) had confirmed degenerative changes in the histological assessment as well. Histological degenerative alterations were observed in the majority of patients when compared to detectable degenerative changes in T2-weighted MRI suggesting the importance of histological assessment of degeneration in the excised intervertebral disc fragments. As early degenerative changes are not detected by the standard T2weighted MRI technique, if neglected, can progress to severe stages resulting in more discomfort and pain to the patients. KEYWORDS:    Disc degeneration, Histology, Magnetic Resonance Imaging &nbsp

Biochemical expression of exudes of a fungal-bacterial bio film during growth and maturation

Biofilms are often complex communities of multiple microbial species and remain attached to surfaces. Fungal-bacterial biofllms are formed when the fungal surface is colonized by one or more species of bacteria. These biofilms can enhance microbial effectiveness compared to the monocultures. Beneficial biofilms can be developed in vitro and be used for various agricultural and biotechnological purposes. As a recent development in biofertilizer research, fungal-rhizobial biofilms have been developed and these are termed biofilmed biofertilizers (BFBFs). This research was focused to investigate chemical composition of compounds exuded during growth and maturation of the biofilms. A developed fungal-bacterial biofilm using an Azotobacter species and a Colletorichum fungal species was used for the study. Exudates of the biofilm, fungal monoculture and bacterial monoculture in solid and liquid states were extracted separately by using three organic solvents; hexane, ethyl acetate and methanol. Extraction was done weekly for four weeks during growth and maturation of the biofllm. Then extracted exudates dissolved in organic solvents were evaporated by using a vortex evaporator. Thereafter crude was mixed with potassium bromide (KBr) and pellets were made. The KBr pellets were analyzed using Fourier Transform Infrared (FTIR) spectroscopy. To evaluate the effect of the exudates of the fungal-bacterial biofilm on seed germination and plant growth in comparison to bacterial and fungal monocultures, a plant assay was done weekly by using lettuce (Lactuca sativa) seeds (N 48). During all four harvests, the fungal-bacterial biofllm produced more diverse functional groups than the mono cultures. The developed biofilm produced carboxylic acids and carboxylic salts, which are associated with plant growth promoting hormones, especially in first and second harvests. Significantly higher plant height and high germination of lettuce with the biofilm exudates could be attributed to above fact. During third and fourth weeks, the biofllm produced more amines and amides than fungal and bacterial mono cultures. This may have contributed to increased pH in biofilm cultures compared to the mono cultures. Thus, it can be concluded that biochemical expression of exudates of fungal-bacterial biofilms during their growth and maturation is very useful for breaking dormancy of seeds and their germination and growth, contributing to high plant productivit

C1 inhibitor deficiency: 2014 United Kingdom consensus document

C1 inhibitor deficiency is a rare disorder manifesting with recurrent attacks of disabling and potentially life-threatening angioedema. Here we present an updated 2014 United Kingdom consensus document for the management of C1 inhibitor-deficient patients, representing a joint venture between the United Kingdom Primary Immunodeficiency Network and Hereditary Angioedema UK. To develop the consensus, we assembled a multi-disciplinary steering group of clinicians, nurses and a patient representative. This steering group first met in 2012, developing a total of 48 recommendations across 11 themes. The statements were distributed to relevant clinicians and a representative group of patients to be scored for agreement on a Likert scale. All 48 statements achieved a high degree of consensus, indicating strong alignment of opinion. The recommendations have evolved significantly since the 2005 document, with particularly notable developments including an improved evidence base to guide dosing and indications for acute treatment, greater emphasis on home therapy for acute attacks and a strong focus on service organisation. This article is protected by copyright. All rights reserved

Antifungal susceptibility and phenotypic characterization of oral isolates of a black fungus from a nasopharyngeal carcinoma patient under radiotherapy

10.1186/s12903-015-0023-9BMC Oral Health15

P109 The impact of tb nice guidance on resource capacity and contact screening outcomes: a retrospective, observational study within a central london tb centre

Introduction and objectives: Recently published NICE guidance has significantly expanded the approach to adult tuberculosis (TB) contact screening by recommending tuberculin skin testing (TST) for pulmonary and laryngeal contacts only, increasing the age threshold for screening and treatment to 65 years and defining a positive TST as induration ≥5 mm, regardless of BCG vaccination status. Interferon Gamma Release Assay (IGRA) is recommended only in situations where more evidence of infection is needed. Our institution has previously adopted an approach comprising a chest radiograph, TST and IGRA. The aim of our study was to evaluate the impact of NICE guidance on screening outcomes and resource capacity by applying the criteria to a well-defined historic cohort of TB contacts. Methods: This was a retrospective, observational study carried out at a central London teaching hospital. The study population comprised 593 consecutive, adult TB contacts screened between 1/1/2008 and 31/12/2010. Data was collected through a retrospective review of TST and IGRA tests. Results: Of the 593 contacts screened, 358 pulmonary contacts had TST and IGRA results. 56% had a TST ≥5 mm, regardless of BCG status, qualifying them for treatment as per the new NICE guidance. Of these, 61% were IGRA negative (discordant) and may therefore include false positive diagnoses, resulting in the potential for over treatment. In those with TST 5–14 mm, discordance rises to 84%. Conversely, 6% of those with TST < 5 mm are IGRA positive representing potentially missed cases. 16% of screened individuals were contacts of extra pulmonary TB. Not screening this group would reduce the demand for outpatient appointments by 151* in our cohort. In contrast, testing contacts > 35 years would require capacity for an additional 165* appointments. Furthermore, there were 162 additional LTBI cases in comparison to previous guidance requiring an additional 648* appointments. 72% of this group were IGRA negative. (*Approximate) Conclusions: Our results show the revised guidance will require increased resource capacity largely due to more patients being classified as having latent TB. In addition to workforce planning to meet these demands, further debate is needed to decide if this new approach truly reduces the incidence of active TB or results in unnecessary treatment

A spatially explicit representation of conservation agriculture for application in global change studies

Conservation agriculture (CA) is widely promoted as a sustainable agricultural management strategy with the potential to alleviate some of the adverse effects of modern, industrial agriculture such as large-scale soil erosion, nutrient leaching and overexploitation of water resources. Moreover, agricultural land managed under CA is proposed to contribute to climate change mitigation and adaptation through reduced emission of greenhouse gases, increased solar radiation reflection, and the sustainable use of soil and water resources. Due to the lack of official reporting schemes, the amount of agricultural land managed under CA systems is uncertain and spatially explicit information about the distribution of CA required for various modeling studies is missing. Here, we present an approach to downscale present-day national-level estimates of CA to a 5 arcminute regular grid, based on multicriteria analysis. We provide a best estimate of CA distribution and an uncertainty range in the form of a low and high estimate of CA distribution, reflecting the inconsistency in CA definitions. We also design two scenarios of the potential future development of CA combining present-day data and an assessment of the potential for implementation using biophysical and socioeconomic factors. By our estimates, 122–215 Mha or 9%–15% of global arable land is currently managed under CA systems. The lower end of the range represents CA as an integrated system of permanent no-tillage, crop residue management and crop rotations, while the high estimate includes a wider range of areas primarily devoted to temporary no-tillage or reduced tillage operations. Our scenario analysis suggests a future potential of CA in the range of 533–1130 Mha (38%–81% of global arable land). Our estimates can be used in various ecosystem modeling applications and are expected to help identifying more realistic climate mitigation and adaptation potentials of agricultural practices

Impact of student choice on academic performance:cross-sectional and longitudinal observations of a student cohort

BACKGROUND: Student choice plays a prominent role in the undergraduate curriculum in many contemporary medical schools. A key unanswered question relates to its impact on academic performance. METHODS: We studied 301 students who were in years 2 and 3 of their medical studies in 2005/06. We investigated the relationship between SSC grade and allocated preference. Separately, we examined the impact of ‘self-proposing’ (students designing and completing their own SSC) on academic performance in other, standard-set, summative assessments throughout the curriculum. The chi-squared test was used to compare academic performance in SSC according to allocated preference. Generalised estimating equations were used to investigate the effect of self-proposing on performance in standard-set examinations. RESULTS: (1) Performance in staff-designed SSC was not related to allocated preference. (2) Performance in year 1 main examination was one of the key predictors of performance in written and OSCE examinations in years 2, 3 and 4 (p<0.001). (3) The higher the score in the year 1 examination, the more likely a student was to self-propose in subsequent years (OR [CI] 1.07 [1.03-1.11], p<0.001). (4) Academic performance of students who self-proposed at least once in years 2 and/or 3 varied according to gender and year of course. CONCLUSION: In this study, no association was observed between allocated preference and SSC grade. The effect of self-proposing on academic performance in standard-set examinations was small. Our findings suggest instead that academically brighter students are more likely to design their own modules. Although student choice may have educational benefits, this report does not provide convincing evidence that it improves academic performance

Modelled biophysical impacts of conservation agriculture on local climates

Including the parameterization of land management practices into Earth System Models has been shown to influence the simulation of regional climates, particularly for temperature extremes. However, recent model development has focused on implementing irrigation where other land management practices such as conservation agriculture (CA) has been limited due to the lack of global spatially explicit datasets describing where this form of management is practiced. Here, we implement a representation of CA into the Community Earth System Model and show that the quality of simulated surface energy fluxes improves when including more information on how agricultural land is managed. We also compare the climate response at the subgrid scale where CA is applied. We find that CA generally contributes to local cooling (~1°C) of hot temperature extremes in mid-latitude regions where it is practiced, while over tropical locations CA contributes to local warming (~1°C) due to changes in evapotranspiration dominating the effects of enhanced surface albedo. In particular, changes in the partitioning of evapotranspiration between soil evaporation and transpiration are critical for the sign of the temperature change: a cooling occurs only when the soil moisture retention and associated enhanced transpiration is sufficient to offset the warming from reduced soil evaporation. Finally, we examine the climate change mitigation potential of CA by comparing a simulation with present-day CA extent to a simulation where CA is expanded to all suitable crop areas. Here, our results indicate that while the local temperature response to CA is considerable cooling (>2°C), the grid-scale changes in climate are counteractive due to negative atmospheric feedbacks. Overall, our results underline that CA has a nonnegligible impact on the local climate and that it should therefore be considered in future climate projections

Heavy Metal-Induced Oxidative Stress on Seed Germination and Seedling Development: A Critical Review

Heavy metal contamination in soils can influence plants and animals, often leading to toxicosis. Heavy metals can impact various biochemical processes in plants, including enzyme and antioxidant production, protein mobilization and photosynthesis. Hydrolyzing enzymes play a major role in seed germination. Enzymes such as acid phosphatases, proteases and α-amylases are known to facilitate both seed germination and seedling growth via mobilizing nutrients in the endosperm. In the presence of heavy metals, starch is immobilized and nutrient sources become limited. Moreover, a reduction in proteolytic enzyme activity and an increase in protein and amino acid content can be observed under heavy metal stress. Proline, is an amino acid which is essential for cellular metabolism. Numerous studies have shown an increase in proline content under oxidative stress in higher plants. Furthermore, heat shock protein production has also been observed under heavy metal stress. The chloroplast small heat shock proteins (Hsp) reduce photosynthesis damage, rather than repair or help to recover from heavy metal-induced damage. Heavy metals are destructive substances for photosynthesis. They are involved in destabilizing enzymes, oxidizing photosystem II (PS II) and disrupting the electron transport chain and mineral metabolism. Although the physiological effects of Cd have been investigated thoroughly, other metals such as As, Cr, Hg, Cu and Pb have received relatively little attention. Among agricultural plants, rice has been studied extensively; additional studies are needed to characterize toxicities of different heavy metals on other crops. This review summarizes the current state of our understanding of the effects of heavy metal stress on seed germination and seedling development and highlights informational gaps and areas for future research