Front Propagation in the Pearling Instability of Tubular Vesicles

Recently Bar-Ziv and Moses discovered a dynamical shape transformation induced in cylindrical lipid bilayer vesicles by the action of laser tweezers. We develop a hydrodynamic theory of fluid bilayers in interaction with the surrounding water and argue that the effect of the laser is to induce a sudden tension in the membrane. We refine our previous analysis to account for the fact that the shape transformation is not uniform but propagates outward from the laser trap. Applying the marginal stability criterion to this situation gives us an improved prediction for the selected initial wavelength and a new prediction for the propagation velocity, both in rough agreement with the experimental values. For example, a tubule of initial radius 0.7\micron\ has a predicted initial sinusoidal perturbation in its diameter with wavelength 5.5\micron, as observed. The perturbation propagates as a front with the qualitatively correct front velocity a bit less than 100\micron/sec. In particular we show why this velocity is initially constant, as observed, and so much smaller than the natural scale set by the tension. We also predict that the front velocity should increase linearly with laser power. Finally we introduce an approximate hydrodynamic model applicable to the fully nonlinear regime. This model exhibits propagating fronts as well as fully-developed ``pearled" vesicles similar to those seen in the experiments.Comment: 42 pages, 6 eps figures included with text in uuencoded file, ps file available from ftp://dept.physics.upenn.edu/pub/Nelson/pearl_propagation.ps submitted to Journal de Physiqu

Tubular structures of GaS

In this Brief Report we demonstrate, using density-functional tight-binding theory, that gallium sulfide (GaS) tubular nanostructures are stable and energetically viable. The GaS-based nanotubes have a semiconducting direct gap which grows towards the value of two-dimensional hexagonal GaS sheet and is in contrast to carbon nanotubes largely independent of chirality. We further report on the mechanical properties of the GaS-based nanotubes

Giant vesicles at the prolate-oblate transition: A macroscopic bistable system

Giant phospholipid vesicles are shown to exhibit thermally activated transitions between a prolate and an oblate shape on a time scale of several seconds. From the fluctuating contour of such a vesicle we extract ellipticity as an effective reaction coordinate whose temporal probability distribution is bimodal. We then reconstruct the effective potential from which we derive an activation energy of the order of $k_BT$ in agreement with theoretical calculations. The dynamics of this transition is well described within a Kramers model of overdamped diffusion in a bistable potential. Thus, this system can serve as a model for macroscopic bistability.Comment: 10 pages, LaTeX, epsfig, 4 eps figures included, to appear in Europhys. Let

Geometry of lipid vesicle adhesion

The adhesion of a lipid membrane vesicle to a fixed substrate is examined from a geometrical point of view. This vesicle is described by the Helfrich hamiltonian quadratic in mean curvature; it interacts by contact with the substrate, with an interaction energy proportional to the area of contact. We identify the constraints on the geometry at the boundary of the shared surface. The result is interpreted in terms of the balance of the force normal to this boundary. No assumptions are made either on the symmetry of the vesicle or on that of the substrate. The strong bonding limit as well as the effect of curvature asymmetry on the boundary are discussed.Comment: 7 pages, some major changes in sections III and IV, version published in Physical Review

Can the Tajmar effect be explained using a modification of inertia?

The Tajmar effect is an unexplained acceleration observed by accelerometers and laser gyroscopes close to rotating supercooled rings. The observed ratio between the gyroscope and ring accelerations was 3+/-1.2x10^-8. Here, a new model for inertia which has been tested quite successfully on the Pioneer and flyby anomalies is applied to this problem. The model assumes that the inertia of the gyroscope is caused by Unruh radiation that appears as the ring and the fixed stars accelerate relative to it, and that this radiation is subject to a Hubble-scale Casimir effect. The model predicts that the sudden acceleration of the nearby ring causes a slight increase in the inertial mass of the gyroscope, and, to conserve momentum in the reference frame of the spinning Earth, the gyroscope rotates clockwise with an acceleration ratio of 1.8+/-0.25x10^-8 in agreement with the observed ratio. However, this model does not explain the parity violation seen in some of the gyroscope data. To test these ideas the Tajmar experiment (setup B) could be exactly reproduced in the southern hemisphere, since the model predicts that the anomalous acceleration should then be anticlockwise.Comment: 9 pages, 1 figure. Accepted by EPL on the 4th December, 200

Bilayer Membrane in Confined Geometry: Interlayer Slide and Steric Repulsion

We derived free energy functional of a bilayer lipid membrane from the first principles of elasticity theory. The model explicitly includes position-dependent mutual slide of monolayers and bending deformation. Our free energy functional of liquid-crystalline membrane allows for incompressibility of the membrane and vanishing of the in-plane shear modulus and obeys reflectional and rotational symmetries of the flat bilayer. Interlayer slide at the mid-plane of the membrane results in local difference of surface densities of the monolayers. The slide amplitude directly enters free energy via the strain tensor. For small bending deformations the ratio between bending modulus and area compression coefficient, Kb/KA, is proportional to the square of monolayer thickness, h. Using the functional we performed self-consistent calculation of steric potential acting on bilayer between parallel confining walls separated by distance 2d. We found that temperature-dependent curvature at the minimum of confining potential is enhanced four times for a bilayer with slide as compared with a unit bilayer. We also calculate viscous modes of bilayer membrane between confining walls. Pure bending of the membrane is investigated, which is decoupled from area dilation at small amplitudes. Three sources of viscous dissipation are considered: water and membrane viscosities and interlayer drag. Dispersion has two branches. Confinement between the walls modifies the bending mode with respect to membrane in bulk solution. Simultaneously, inter-layer slipping mode, damped by viscous drag, remains unchanged by confinement.Comment: 23 pages,3 figures, pd

Tidal controls on trace gas dynamics in a seagrass meadow of the Ria Formosa lagoon (southern Portugal)

Coastal zones are important source regions for a variety of trace gases, including halocarbons and sulfur-bearing species. While salt marshes, macroalgae and phyto-plankton communities have been intensively studied, little is known about trace gas fluxes in seagrass meadows. Here we report results of a newly developed dynamic flux chamber system that can be deployed in intertidal areas over full tidal cycles allowing for highly time-resolved measurements. The fluxes of CO2, methane (CH4) and a range of volatile organic compounds (VOCs) showed a complex dynamic mediated by tide and light. In contrast to most previous studies, our data indicate significantly enhanced fluxes during tidal immersion relative to periods of air exposure. Short emission peaks occurred with onset of the feeder current at the sampling site. We suggest an overall strong effect of advective transport processes to explain the elevated fluxes during tidal immersion. Many emission estimates from tidally influenced coastal areas still rely on measurements carried out during low tide only. Hence, our results may have significant implications for budgeting trace gases in coastal areas. This dynamic flux chamber system provides intensive time series data of community respiration (at night) and net community production (during the day) of shallow coastal systems.German Federal Ministry of Education and Research (BMBF) [03F0611E, 03F0662E]; EU FP7 ASSEMBLE research infrastructure initiative