Video survey of deep benthic macroalgae and macroalgal detritus along a glacial Arctic fjord: Kongsfjorden (Spitsbergen)

In Kongsfjorden (Spitsbergen), we quantified the zonation of visually dominant macroalgal taxa and of detached macroalgae from underwater videos taken in summer 2009 at six transects between 2 and 138 m water depth. For the first time, we provide information on the occurrence of deep water red algae below the kelp forest and of detached macroalgae at water depth > 30 m. The presence and depth distribution of visually dominant red algae were especially pronounced at the outer fjord, decreased with proximity to the glacial front and they were absent at the innermost locations. Deepest crustose coralline red algae and foliose red algae were observed at 72 and 68 m, respectively. Brown algae were distributed along the entire fjord axis at 2–32 m. Green algae were only present at the middle to inner fjord and at areas influenced by physical disturbance at water depths of 2–26 m. With proximity to the inner fjord the depth distribution of all macroalgae became shallower and only extended to 18 m depth at the innermost location. Major recipients of detached macroalgae were sites at the shallower inner fjord and at the middle fjord below the photic zone at depths to 138 m. They may either fuel deep water secondary production, decompose or support carbon sequestration. Univariate and community analyses of macroalgal classes including detached macroalgae across transects and over depths reveal a considerable difference in community structure between the outermost sites, the central part and the inner fjord areas, reflecting the strong environmental gradients along glacial fjords

Video survey of deep benthic macroalgae and macroalgal detritus along a glacial Arctic fjord: Kongsfjorden (Spitsbergen)

In Kongsfjorden (Spitsbergen), we quantified the zonation of visually dominant macroalgal taxa and of detached macroalgae from underwater videos taken in summer 2009 at six transects between 2 and 138 m water depth. For the first time, we provide information on the occurrence of deep water red algae below the kelp forest and of detached macroalgae at water depth > 30 m. The presence and depth distribution of visually dominant red algae were especially pronounced at the outer fjord, decreased with proximity to the glacial front and they were absent at the innermost locations. Deepest crustose coralline red algae and foliose red algae were observed at 72 and 68 m, respectively. Brown algae were distributed along the entire fjord axis at 2–32 m. Green algae were only present at the middle to inner fjord and at areas influenced by physical disturbance at water depths of 2–26 m. With proximity to the inner fjord the depth distribution of all macroalgae became shallower and only extended to 18 m depth at the innermost location. Major recipients of detached macroalgae were sites at the shallower inner fjord and at the middle fjord below the photic zone at depths to 138 m. They may either fuel deep water secondary production, decompose or support carbon sequestration. Univariate and community analyses of macroalgal classes including detached macroalgae across transects and over depths reveal a considerable difference in community structure between the outermost sites, the central part and the inner fjord areas, reflecting the strong environmental gradients along glacial fjords

Lipid degradation and photosynthetic traits after prolonged darkness in four Antarctic benthic diatoms, including the newly described species Planothidium wetzelii sp. nov.

In polar regions, the microphytobenthos has important ecological functions in shallow-water habitats, such as on top of coastal sediments. This community is dominated by benthic diatoms, which contribute significantly to primary production and biogeochemical cycling while also being an important component of polar food webs. Polar diatoms are able to cope with markedly changing light conditions and prolonged periods of darkness during the polar night in Antarctica. However, the underlying mechanisms are poorly understood. In this study, five strains of Antarctic benthic diatoms were isolated in the field, and the resulting unialgal cultures were identified as four distinct species, of which one is described as a new species, Planothidium wetzelii sp. nov. All four species were thoroughly examined using physiological, cell biological, and biochemical methods over a fully controlled dark period of 3 months. The results showed that the utilization of storage lipids is one of the key mechanisms in Antarctic benthic diatoms to survive the polar night, although different fatty acids were involved in the investigated taxa. In all tested species, the storage lipid content declined significantly, along with an ultrastructurally observable degradation of the chloroplasts. Surprisingly, photosynthetic performance did not change significantly despite chloroplasts decreasing in thylakoid membranes and an increased number of plastoglobules. Thus, a combination of biochemical and cell biological mechanisms allows Antarctic benthic diatoms to survive the polar night

Exploring benthic diatom diversity in the West Antarctic Peninsula: insights from a morphological and molecular approach

Polar regions are among the most extreme habitats on Earth. However, diatom biodiversity in those regions is much more extensive and ecologically diverse than previously thought. The objective of this study was to add knowledge to benthic diatom biodiversity in Western Antarctic coastal zones via identification by means of morphology, DNA metabarcoding and cultured isolates. In addition, a taxonomically validated reference library for Antarctic benthic diatoms was established with comprehensive information on habitat, morphology and DNA barcodes (rbcL and 18SV4). Benthic samples from marine, brackish and freshwater habitats were taken at the Antarctic Peninsula. A total of 162 clonal cultures were established, resulting in the identification of 60 taxa. The combination of total morphological richness of 174 taxa, including the clones, with an additional 73 taxa just assigned by metabarcoding resulted in 247 infrageneric taxa. Of those taxa, 33 were retrieved by all three methods and 111 only by morphology. The barcode reference library of Antarctic species with the new references obtained through culturing allowed the assignment of 47 taxa in the metabarcoding analyses, which would have been left unassigned because no matching reference sequences were available before. Non–metric multidimensional scaling analyses of morphological as well as molecular data showed a clear separation of diatom communities according to water and substratum types. Many species, especially marine taxa, still have no record in reference databases. This highlights the need for a more comprehensive reference library to further improve routine diatom metabarcoding. Overall, a combination of morphological and molecular methods, along with culturing, provides complementary information on the biodiversity of benthic diatoms in the region

Multi-omics for studying and understanding polar life

Polar ecosystems are experiencing amongst the most rapid rates of regional warming on Earth. Here, we discuss ‘omics’ approaches to investigate polar biodiversity, including the current state of the art, future perspectives and recommendations. We propose a community road map to generate and more fully exploit multi-omics data from polar organisms. These data are needed for the comprehensive evaluation of polar biodiversity and to reveal how life evolved and adapted to permanently cold environments with extreme seasonality. We argue that concerted action is required to mitigate the impact of warming on polar ecosystems via conservation efforts, to sustainably manage these unique habitats and their ecosystem services, and for the sustainable bioprospecting of novel genes and compounds for societal gain

Exploring benthic diatom diversity in the West Antarctic Peninsula: insights from a morphological and molecular approach

Polar regions are among the most extreme habitats on Earth. However, diatom biodiversity in those regions is much more extensive and ecologically diverse than previously thought. The objective of this study was to add knowledge to benthic diatom biodiversity in Western Antarctic coastal zones via identification by means of morphology, DNA metabarcoding and cultured isolates. In addition, a taxonomically validated reference library for Antarctic benthic diatoms was established with comprehensive information on habitat, morphology and DNA barcodes (rbcL and 18SV4). Benthic samples from marine, brackish and freshwater habitats were taken at the Antarctic Peninsula. A total of 162 clonal cultures were established, resulting in the identification of 60 taxa. The combination of total morphological richness of 174 taxa, including the clones, with an additional 73 taxa just assigned by metabarcoding resulted in 247 infrageneric taxa. Of those taxa, 33 were retrieved by all three methods and 111 only by morphology. The barcode reference library of Antarctic species with the new references obtained through culturing allowed the assignment of 47 taxa in the metabarcoding analyses, which would have been left unassigned because no matching reference sequences were available before. Non–metric multidimensional scaling analyses of morphological as well as molecular data showed a clear separation of diatom communities according to water and substratum types. Many species, especially marine taxa, still have no record in reference databases. This highlights the need for a more comprehensive reference library to further improve routine diatom metabarcoding. Overall, a combination of morphological and molecular methods, along with culturing, provides complementary information on the biodiversity of benthic diatoms in the region

Video recordings of six locations in Kongsfjorden (Spitsbergen) to investigate macroalgae distribution between 2-138 m water depth in summer 2009

Macrophytobenthos is a central part of marine shelf ecosystems in the Arctic, both as primary producers and as habitat builders and may contribute substantially to the carbon export into the deep sea. In Kongsfjorden (western Spitsbergen, up to 394 m deep), we determined the species composition, depth zonation and spatial distribution of coastal benthic communities from remote videos taken in summer 2009 at six transects spanning 2 to 138 m water depth and created the first macroalgal Geographic Information System (GIS) for Kongsfjorden. For the first time, we provide information on deep water and detrital macroalgae (defined as detached macroalgae) >30 m water depth. Benthic communities were significantly different between outermost and inner fjord locations. Chlorophyta were mainly recorded at the middle to inner fjord and at areas influenced by physical disturbance. The cover of Rhodophyta was high at the outer fjord and decreased with proximity to the glacial front. Phaeophyceae were distributed along the entire fjord axis, but their depth distribution was changing along the fjord axis. Deepest records of Chlorophyta, Phaeophyceae (kelp and filamentous Phaeophyceae) and foliose and crustose coralline Rhodophyta were at 26, 30-32 and almost 70 m depth, respectively. With proximity to the inner fjord the depth distribution of all macroalgae became shallower. A substantial amount of detrital macroalgal biomass was present at the middle to inner fjord at depths between 6 and 138 m and thereby possibly entered the deep-water food web

Lipid degradation and photosynthetic traits after prolonged darkness in four Antarctic benthic diatoms, including the newly described species Planothidium wetzelii sp. nov.

In polar regions, the microphytobenthos has important ecological functions in shallow-water habitats, such as on top of coastal sediments. This community is dominated by benthic diatoms, which contribute significantly to primary production and biogeochemical cycling while also being an important component of polar food webs. Polar diatoms are able to cope with markedly changing light conditions and prolonged periods of darkness during the polar night in Antarctica. However, the underlying mechanisms are poorly understood. In this study, five strains of Antarctic benthic diatoms were isolated in the field, and the resulting unialgal cultures were identified as four distinct species, of which one is described as a new species, Planothidium wetzelii sp. nov. All four species were thoroughly examined using physiological, cell biological, and biochemical methods over a fully controlled dark period of 3 months. The results showed that the utilization of storage lipids is one of the key mechanisms in Antarctic benthic diatoms to survive the polar night, although different fatty acids were involved in the investigated taxa. In all tested species, the storage lipid content declined significantly, along with an ultrastructurally observable degradation of the chloroplasts. Surprisingly, photosynthetic performance did not change significantly despite chloroplasts decreasing in thylakoid membranes and an increased number of plastoglobules. Thus, a combination of biochemical and cell biological mechanisms allows Antarctic benthic diatoms to survive the polar night.</jats:p

Exploring benthic diatom diversity in the West Antarctic Peninsula: insights from a morphological and molecular approach

Polar regions are among the most extreme habitats on Earth. However, diatom biodiversity in those regions is much more extensive and ecologically diverse than previously thought. The objective of this study was to add knowledge to benthic diatom biodiversity in Western Antarctic coastal zones via identification by means of morphology, DNA metabarcoding and cultured isolates. In addition, a taxonomically validated reference library for Antarctic benthic diatoms was established with comprehensive information on habitat, morphology and DNA barcodes (rbcL and 18SV4). Benthic samples from marine, brackish and freshwater habitats were taken at the Antarctic Peninsula. A total of 162 clonal cultures were established, resulting in the identification of 60 taxa. The combination of total morphological richness of 174 taxa, including the clones, with an additional 73 taxa just assigned by metabarcoding resulted in 247 infrageneric taxa. Of those taxa, 33 were retrieved by all three methods and 111 only by morphology. The barcode reference library of Antarctic species with the new references obtained through culturing allowed the assignment of 47 taxa in the metabarcoding analyses, which would have been left unassigned because no matching reference sequences were available before. Non–metric multidimensional scaling analyses of morphological as well as molecular data showed a clear separation of diatom communities according to water and substratum types. Many species, especially marine taxa, still have no record in reference databases. This highlights the need for a more comprehensive reference library to further improve routine diatom metabarcoding. Overall, a combination of morphological and molecular methods, along with culturing, provides complementary information on the biodiversity of benthic diatoms in the region