The role of tree size in the leafing phenology of a seasonally dry tropical forest in Belize, Central America

Leafing phenology of two dry-forest sites on soils of different depth (S = shallow, D = deep) at Shipstern Reserve, Belize, were compared at the start of the rainy season (April-June 2000). Trees ≥ 2.5 cm dbh were recorded weekly for 8 wk in three 0.04-ha plots per site. Ten species were analysed individually for their phenological patterns, of which the three most common were Bursera simaruba, Metopium brownei and Jatropha gaumeri. Trees were divided into those in the canopy (> 10 cm dbh) and the subcanopy (≤ 10 cm dbh). Site S had larger trees on average than site D. The proportion of trees flushing leaves at any one time was generally higher in site S than in site D, for both canopy and subcanopy trees. Leaf flush started 2 wk earlier in site S than site D for subcanopy trees, but only 0.5 wk earlier for the canopy trees. Leaf flush duration was 1.5 wk longer in site S than site D. Large trees in the subcanopy flushed leaves earlier than small ones at both sites but in the canopy just at site D. Large trees flushed leaves earlier than small ones in three species and small trees flushed leaves more rapidly in two species. Bursera and Jatropha followed the general trends but Metopium, with larger trees in site D than site S, showed the converse with onset of flushing I wk earlier in site D than site S. Differences in response of the canopy and subcanopy trees on each site can be accounted for by the predominance of spring-flushing or stem-succulent species in site S and a tendency for evergreen species to occur in site D. Early flushing of relatively larger trees in site D most likely requires access to deeper soil water reserves but small and large trees utilize stored tree water in site S

Links between soil microbial communities and plant traits in a species-rich grassland under long-term climate change

Climate change can influence soil microorganisms directly by altering their growth and activity but also indirectly via effects on the vegetation, which modifies the availability of resources. Direct impacts of climate change on soil microorganisms can occur rapidly, whereas indirect effects mediated by shifts in plant community composition are not immediately apparent and likely to increase over time. We used molecular fingerprinting of bacterial and fungal communities in the soil to investigate the effects of 17 years of temperature and rainfall manipulations in a species‐rich grassland near Buxton, UK. We compared shifts in microbial community structure to changes in plant species composition and key plant traits across 78 microsites within plots subjected to winter heating, rainfall supplementation, or summer drought. We observed marked shifts in soil fungal and bacterial community structure in response to chronic summer drought. Importantly, although dominant microbial taxa were largely unaffected by drought, there were substantial changes in the abundances of subordinate fungal and bacterial taxa. In contrast to short‐term studies that report high resistance of soil fungi to drought, we observed substantial losses of fungal taxa in the summer drought treatments. There was moderate concordance between soil microbial communities and plant species composition within microsites. Vector fitting of community‐weighted mean plant traits to ordinations of soil bacterial and fungal communities showed that shifts in soil microbial community structure were related to plant traits representing the quality of resources available to soil microorganisms: the construction cost of leaf material, foliar carbon‐to‐nitrogen ratios, and leaf dry matter content. Thus, our study provides evidence that climate change could affect soil microbial communities indirectly via changes in plant inputs and highlights the importance of considering long‐term climate change effects, especially in nutrient‐poor systems with slow‐growing vegetation

Variability of above-ground litter inputs alters soil physicochemical and biological processes:a meta-analysis of litterfall-manipulation experiments

Global change has been shown to alter the amount of above-ground litter inputs to soil greatly, which could cause substantial cascading effects on below-ground biogeochemical cycling. Despite extensive study, there is uncertainty about how changes in above-ground litter inputs affect soil carbon and nutrient turnover and transformation. Here, we conducted a meta-analysis on 70 litter-manipulation experiments in order to assess how changes in above-ground litter inputs alter soil physicochemical properties, carbon dynamics and nutrient cycles. Our results demonstrated that litter removal decreased soil respiration by 34%, microbial biomass carbon in the mineral soil by 39% and total carbon in the mineral soil by 10%, whereas litter addition increased them by 31, 26 and 10%, respectively. This suggests that greater litter inputs increase the soil carbon sink despite higher rates of carbon release and transformation. Total nitrogen and extractable inorganic nitrogen in the mineral soil decreased by 17 and 30%, respectively, under litter removal, but were not altered by litter addition. Overall, litter manipulation had a significant impact upon soil temperature and moisture, but not soil pH; litter inputs were more crucial in buffering soil temperature and moisture fluctuations in grassland than in forest. Compared to other ecosystems, tropical and subtropical forests were more sensitive to variation in litter inputs, as altered litter inputs affected the turnover and accumulation of soil carbon and nutrients more substantially over a shorter time period. Our study demonstrates that although the magnitude of responses differed greatly among ecosystems, the direction of the responses was very similar across different ecosystems. Interactions between plant productivity and below-ground biogeochemical cycling need to be taken into account to predict ecosystem responses to environmental change

Corrigendum to "Variability of above-ground litter inputs alters soil physicochemical and biological processes: a meta-analysis of litterfall-manipulation experiments" published in Biogeosciences, 10, 1–11, 2013

No abstract available

Adaptive self-organization in a realistic neural network model

Information processing in complex systems is often found to be maximally efficient close to critical states associated with phase transitions. It is therefore conceivable that also neural information processing operates close to criticality. This is further supported by the observation of power-law distributions, which are a hallmark of phase transitions. An important open question is how neural networks could remain close to a critical point while undergoing a continual change in the course of development, adaptation, learning, and more. An influential contribution was made by Bornholdt and Rohlf, introducing a generic mechanism of robust self-organized criticality in adaptive networks. Here, we address the question whether this mechanism is relevant for real neural networks. We show in a realistic model that spike-time-dependent synaptic plasticity can self-organize neural networks robustly toward criticality. Our model reproduces several empirical observations and makes testable predictions on the distribution of synaptic strength, relating them to the critical state of the network. These results suggest that the interplay between dynamics and topology may be essential for neural information processing.Comment: 6 pages, 4 figure

Effect of Corn Bran and Corn Steep Inclusion in Finishing Diets on Diet Digestibility and Fiber Disappearance

University of Florida, Gainesville, FL Eight ruminally cannulated heifers were used in a replicated 4 x 4 Latin square to determine the effects of replacing dry rolled corn with corn bran or a combination of corn bran and corn steep, on diet digestibility and rumen environment. Heifers received diets including 0% bran, 30% bran, 30% bran/15% steep and 45% bran/ 15% steep. Byproduct diets were effective in reducing acidosis and had lower dry matter and organic matter digestibilities than the control diet, regardless of steep inclusion. Fiber digestion and microbial efficiency may have been promoted with the inclusion of corn bran and steep in the diet. Feeding a diet containing corn bran and steep may be valuable for improving nutrient utilization in the rumen

Effect of Corn Bran and Corn Steep Inclusion in Finishing Diets on Diet Digestibility and Fiber Disappearance

University of Florida, Gainesville, FL Eight ruminally cannulated heifers were used in a replicated 4 x 4 Latin square to determine the effects of replacing dry rolled corn with corn bran or a combination of corn bran and corn steep, on diet digestibility and rumen environment. Heifers received diets including 0% bran, 30% bran, 30% bran/15% steep and 45% bran/ 15% steep. Byproduct diets were effective in reducing acidosis and had lower dry matter and organic matter digestibilities than the control diet, regardless of steep inclusion. Fiber digestion and microbial efficiency may have been promoted with the inclusion of corn bran and steep in the diet. Feeding a diet containing corn bran and steep may be valuable for improving nutrient utilization in the rumen

The effect of brevenal on brevetoxin-induced DNA damage in human lymphocytes

Brevenal is a nontoxic short-chain trans-syn polyether that competes with brevetoxin (PbTx) for the active site on voltage-sensitive sodium channels. The PbTxs are highly potent polyether toxins produced during blooms of several species of marine dinoflagellates, most notably Karenia brevis. Blooms of K. brevis have been associated with massive fish kills, marine mammal poisoning, and are potentially responsible for adverse human health effects such as respiratory irritation and airway constriction in beach-goers. Additionally, the consumption of shellfish contaminated with PbTxs results in neurotoxic shellfish poisoning (NSP). The purpose of the present study was to determine whether PbTx could induce DNA damage in a human cell type, the lymphocyte, and if so, whether the damage could be antagonized or ameliorated by brevenal, a brevetoxin antagonist. The DNA damage may occur through both endogenous and exogenous physiological and pathophysiological processes. Unrepaired or erroneously repaired DNA damage may result in gene mutation, chromosome aberration, and modulation of gene regulation, which have been associated with immunotoxicity and carcinogenesis. A single-cell gel electrophoresis assay, or comet assay, was used to determine and compare DNA damage following various treatments. The data were expressed as tail moments, which is the percentage of DNA in the tail multiplied by the length between the center of the head and center of the tail (in arbitrary units). The negative control tail moment was 29.2 (SE=±0.9), whereas the positive control (hydrogen peroxide) was 72.1 (1.5) and solvent (ethanol) was 24.2 (2.1). The PbTx-2 (from Sigma, St. Louis, MO, USA), 10−8 M was 41.3 (3.6), PbTx-9 (Sigma), 10−8 M was 57.0 (5.3), PbTx-2 (from University of North Carolina at Wilmington, UNCW), 10−8 M was 49.4 (9.9), and PbTx-3 (UNCW), 10−8 M was 64.0 (6.4). 1.0 μg/ml brevenal applied 1 h before the PbTxs protected the lymphocytes from DNA damage; PbTx-2 (Sigma), 31.3 (2.1); PbTx-9 (Sigma), 35.5 (2.9); PbTx-2 (UNCW), 33.9 (1.4); PbTx-3 (UNCW), 34.9 (1.25). The tail moment for 1.0 μg/ml brevenal alone was 30.8 (2.6). The results indicate that extensive genotoxic damage is induced by PbTx-2 and 9 (Sigma), and PbTx-2 and 3 (UNCW) in normal human lymphocytes, which is fully antagonized by brevenal. This suggests that the immune systems of individuals exposed to PbTx during harmful algal bloom (HAB) events may be at risk. Originally published Archives in Toxicology, Vol. 79, No. 11, Nov 200

Invasive Signal Crayfish in the UK: Survey Methods to Inform Evidence-based Management

With invasive crayfish becoming increasingly widespread, evidence-based management is crucial to protect freshwater ecosystems. Knowledge of the structure and function of invasive crayfish populations allows for an effective evaluation of management efforts. Recent methodological developments have enabled the first truly quantitative studies of UK invasive crayfish populations in the field. This was achieved by the ‘triple drawdown’ (TDD) survey approach. In this article, we explore current survey approaches and their limitations, and we introduce the TDD method with its implications for crayfish survey, policy development and management

The ‘Pritchard Trap’: a novel quantitative survey method for crayfish

1. As crayfish invasions continue to threaten native freshwater biota, a detailed understanding of crayfish distribution and population structure becomes imperative. Nonetheless, most current survey methods provide inadequate demographic data. The quantitative ‘Triple Drawdown’ (TDD) dewatering method has highlighted the importance of such data, yet practical constraints prevent its large-scale application. 2. Here, we introduce the ‘Pritchard Trap’, a novel passive sampling method that reliably generates quantitative crayfish population data while requiring substantially lower sampling effort than TDDs. This quadrat-style sampler was extensively tested in headwater streams of North Yorkshire, England, along an invasion gradient for signal crayfish (Pacifastacus leniusculus) from well-established sites to mixed populations of signal crayfish and native white-clawed crayfish (Austropotamobius pallipes). 3. The Pritchard Trap was trialled over several time intervals to determine the minimum required trap deployment time. TDDs at the same sites allowed for a robust evaluation of Pritchard Trap sampling accuracy in representing crayfish densities and population structure. 4. The Pritchard Trap successfully sampled both invasive and native crayfish (8–42 mm carapace length). A minimum passive deployment time of 4 days was required. At low crayfish densities (0.5 individuals m−2), increased trapping effort was necessary to achieve accurate population density and size class distribution estimates. The Pritchard Trap required substantially less sampling effort (working hours) and resources than the TDD, whilst also posing less risk to non-target species. 5. The Pritchard Trap, for the first time, affords logistically simple, truly quantitative investigations of crayfish population demographics for headwater systems. It could be integrated into crayfish research and management, for example to explore density-dependent ecological impacts of invasive crayfish and their management responses or to monitor populations and recruitment in native crayfish conservation initiatives